| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is cumA [H]
Identifier: 108762119
GI number: 108762119
Start: 3974556
End: 3976001
Strand: Reverse
Name: cumA [H]
Synonym: MXAN_3420
Alternate gene names: 108762119
Gene position: 3976001-3974556 (Counterclockwise)
Preceding gene: 108763711
Following gene: 108763457
Centisome position: 43.5
GC content: 66.87
Gene sequence:
>1446_bases ATGCATCGCAATCGCTGGTTCATCGCGGCAGCTCTCGTTGCCCTCCTCGCAATGCTCGCGGCACTCGGCCTCGGCCAGGA GGATGATGCCGCCATGGCGACGCTCCGGCAGCCGCGCGTGGCACCGCCCTACCCTGAAGACACCCCGTCCACGGGCCGCG TGCGCGAGTTCGAGCTCGTCGCGGCCCCGACAGCCCTCCCGCTCCTGGATGGCCGGAGTCTGGAGGTCTGGGCCTACAAC GGCCAGGTACCCGGCCCCACCCTTCGCGCCACCCATGGCGACACGGTCCGCGTGCGATTCACCAACAAGCTGCCGCAGCC GACGACCATTCACTGGCACGGCATCCGTCTTCCGAACGGAATGGACGGCGTGCCCGGGGTGACCCAGCCTCCCATCCCAC CTGGGGGAACCTTCCTCTATGAGTTCAAAGTGAAGGACGCAGGAACCTACTGGTTTCACCCGCACCTGCGCGGGAGCGAG CAAGTCGAGCGAGGGCTGTTCGGCGTGCTCATCGTGGAGGACCAGAAGCCCGGTCCTTTCTCACGCGAGCTCGTCTGGGT GCTCGACGACTGGCGACTCGACGCGAGTGGCCAGATTGACGGCCGATTCAACACGCGCCACGACCTCGCGCACGACGGCC GCTGGGGGCAGGTCTCCACGGTGAACGGGGCTGTCCAGCCAGAAGTCCCGCTGCAGCCCGGCGAGCGGGTGCGACTGCGG ATGGTCAACGTTGCAAACGGGCGCGTGTTCGCGCCTTCCTTCGAAGGGCTGGGCGCATCTGTCATCGCGATCGACGGGCT GGCCACGGACCGGCCGCAGCCGGCCTCCCGCTTGGAGCTCGCTCCAGGGAACCGCGTCGACCTGGACTTCACCGTTCCCG AGGCGCTGAGCAACCAGCGCATGGAGGTGATGGACCACTTCACCCGCAGGCCGTTCCCTCTCGCAACGCTGGTGGTGTCT GGAGAGGTCGTGCGGCCACCCGAAGTGGCAGCAGTTGCCCCGCCCCCGAGTCCTGACCTCTCTCCAGCGCGTGCACTGCA ACCCGCGGAGACCTTTCGGCTGAATGCGAGGCGAGGAGGCCCCTTCGGCATCGAGTGGACCATCAATGACGAGGCGTTCC ACCACGAGGGGGAGCATGCCTCCGCGCACCACAAGGTCTACCGGCTCCCTGCCCACCAATGGGCCACGCTGCGTTTCGTC AACGAGTCCTCCCGCCTGCACCCCATGCACGTGCATGGCCAGTTCTTCCGGGTGGTGGCACGCAATGGTGCATCGGTGGA CGAGGGACACTGGCGCGACACCGTGCTGATTCGTCCAAGAGAGACGGTGGATGTGGCGATGTTCCCGCAGGACGTGGGGG CCTGGATGCTCCACTGCCACATCCAAGAGCACGCCGAGGCTGGGATGATGACGCTCGTGGACGTCCATGCGGAGGGTTCC CAGTAA
Upstream 100 bases:
>100_bases GCTGCGCACCGAGGTCACGCGCCTCGGGGCCGGGCCACGCCACCACGGCGGCCTGGTCCCCTCCTCGCCCGCAGCTTCCA TCCATTCGTGAAGAGGCTTC
Downstream 100 bases:
>100_bases GCGAGCCGCGCCATTCCGACAGCGCCGCGTTCGCCAGACCTGAAGTCGAGCCCCCGGCCCATTACAGTGTGACCAGCCTG GTCACACCCGGCCCTTTTCT
Product: multicopper oxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MHRNRWFIAAALVALLAMLAALGLGQEDDAAMATLRQPRVAPPYPEDTPSTGRVREFELVAAPTALPLLDGRSLEVWAYN GQVPGPTLRATHGDTVRVRFTNKLPQPTTIHWHGIRLPNGMDGVPGVTQPPIPPGGTFLYEFKVKDAGTYWFHPHLRGSE QVERGLFGVLIVEDQKPGPFSRELVWVLDDWRLDASGQIDGRFNTRHDLAHDGRWGQVSTVNGAVQPEVPLQPGERVRLR MVNVANGRVFAPSFEGLGASVIAIDGLATDRPQPASRLELAPGNRVDLDFTVPEALSNQRMEVMDHFTRRPFPLATLVVS GEVVRPPEVAAVAPPPSPDLSPARALQPAETFRLNARRGGPFGIEWTINDEAFHHEGEHASAHHKVYRLPAHQWATLRFV NESSRLHPMHVHGQFFRVVARNGASVDEGHWRDTVLIRPRETVDVAMFPQDVGAWMLHCHIQEHAEAGMMTLVDVHAEGS Q
Sequences:
>Translated_481_residues MHRNRWFIAAALVALLAMLAALGLGQEDDAAMATLRQPRVAPPYPEDTPSTGRVREFELVAAPTALPLLDGRSLEVWAYN GQVPGPTLRATHGDTVRVRFTNKLPQPTTIHWHGIRLPNGMDGVPGVTQPPIPPGGTFLYEFKVKDAGTYWFHPHLRGSE QVERGLFGVLIVEDQKPGPFSRELVWVLDDWRLDASGQIDGRFNTRHDLAHDGRWGQVSTVNGAVQPEVPLQPGERVRLR MVNVANGRVFAPSFEGLGASVIAIDGLATDRPQPASRLELAPGNRVDLDFTVPEALSNQRMEVMDHFTRRPFPLATLVVS GEVVRPPEVAAVAPPPSPDLSPARALQPAETFRLNARRGGPFGIEWTINDEAFHHEGEHASAHHKVYRLPAHQWATLRFV NESSRLHPMHVHGQFFRVVARNGASVDEGHWRDTVLIRPRETVDVAMFPQDVGAWMLHCHIQEHAEAGMMTLVDVHAEGS Q >Mature_481_residues MHRNRWFIAAALVALLAMLAALGLGQEDDAAMATLRQPRVAPPYPEDTPSTGRVREFELVAAPTALPLLDGRSLEVWAYN GQVPGPTLRATHGDTVRVRFTNKLPQPTTIHWHGIRLPNGMDGVPGVTQPPIPPGGTFLYEFKVKDAGTYWFHPHLRGSE QVERGLFGVLIVEDQKPGPFSRELVWVLDDWRLDASGQIDGRFNTRHDLAHDGRWGQVSTVNGAVQPEVPLQPGERVRLR MVNVANGRVFAPSFEGLGASVIAIDGLATDRPQPASRLELAPGNRVDLDFTVPEALSNQRMEVMDHFTRRPFPLATLVVS GEVVRPPEVAAVAPPPSPDLSPARALQPAETFRLNARRGGPFGIEWTINDEAFHHEGEHASAHHKVYRLPAHQWATLRFV NESSRLHPMHVHGQFFRVVARNGASVDEGHWRDTVLIRPRETVDVAMFPQDVGAWMLHCHIQEHAEAGMMTLVDVHAEGS Q
Specific function: May be involved in copper homeostasis and oxidative stress response [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1786314, Length=262, Percent_Identity=33.969465648855, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1789394, Length=450, Percent_Identity=24.6666666666667, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6323703, Length=460, Percent_Identity=25.6521739130435, Blast_Score=122, Evalue=9e-29, Organism=Saccharomyces cerevisiae, GI6321067, Length=244, Percent_Identity=27.4590163934426, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6320714, Length=540, Percent_Identity=22.037037037037, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI18859919, Length=261, Percent_Identity=31.4176245210728, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI221330000, Length=222, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24650186, Length=120, Percent_Identity=39.1666666666667, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24585842, Length=222, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI281360167, Length=222, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI221329998, Length=222, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI28574104, Length=141, Percent_Identity=34.7517730496454, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR002355 - InterPro: IPR008972 [H]
Pfam domain/function: PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 53254; Mature: 53254
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS00079 MULTICOPPER_OXIDASE1 ; PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRNRWFIAAALVALLAMLAALGLGQEDDAAMATLRQPRVAPPYPEDTPSTGRVREFELV CCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEE AAPTALPLLDGRSLEVWAYNGQVPGPTLRATHGDTVRVRFTNKLPQPTTIHWHGIRLPNG ECCCEEEEECCCEEEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCC MDGVPGVTQPPIPPGGTFLYEFKVKDAGTYWFHPHLRGSEQVERGLFGVLIVEDQKPGPF CCCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCHHHHHCCEEEEEEEECCCCCCC SRELVWVLDDWRLDASGQIDGRFNTRHDLAHDGRWGQVSTVNGAVQPEVPLQPGERVRLR CCEEEEEEECEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEE MVNVANGRVFAPSFEGLGASVIAIDGLATDRPQPASRLELAPGNRVDLDFTVPEALSNQR EEEECCCEEECCCCCCCCEEEEEEECCCCCCCCCHHEEEECCCCEEEEEEECHHHHCCCH MEVMDHFTRRPFPLATLVVSGEVVRPPEVAAVAPPPSPDLSPARALQPAETFRLNARRGG HHHHHHHHCCCCCEEEEEEECCEECCCCCEEECCCCCCCCCHHHHCCCCHHEEEECCCCC PFGIEWTINDEAFHHEGEHASAHHKVYRLPAHQWATLRFVNESSRLHPMHVHGQFFRVVA CEEEEEEECCHHHCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEECCCEEEEEE RNGASVDEGHWRDTVLIRPRETVDVAMFPQDVGAWMLHCHIQEHAEAGMMTLVDVHAEGS CCCCCCCCCCCCCEEEECCCCCEEEEECCHHHCEEEEEEEEHHHCCCCEEEEEEEECCCC Q C >Mature Secondary Structure MHRNRWFIAAALVALLAMLAALGLGQEDDAAMATLRQPRVAPPYPEDTPSTGRVREFELV CCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEE AAPTALPLLDGRSLEVWAYNGQVPGPTLRATHGDTVRVRFTNKLPQPTTIHWHGIRLPNG ECCCEEEEECCCEEEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCC MDGVPGVTQPPIPPGGTFLYEFKVKDAGTYWFHPHLRGSEQVERGLFGVLIVEDQKPGPF CCCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCHHHHHCCEEEEEEEECCCCCCC SRELVWVLDDWRLDASGQIDGRFNTRHDLAHDGRWGQVSTVNGAVQPEVPLQPGERVRLR CCEEEEEEECEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEE MVNVANGRVFAPSFEGLGASVIAIDGLATDRPQPASRLELAPGNRVDLDFTVPEALSNQR EEEECCCEEECCCCCCCCEEEEEEECCCCCCCCCHHEEEECCCCEEEEEEECHHHHCCCH MEVMDHFTRRPFPLATLVVSGEVVRPPEVAAVAPPPSPDLSPARALQPAETFRLNARRGG HHHHHHHHCCCCCEEEEEEECCEECCCCCEEECCCCCCCCCHHHHCCCCHHEEEECCCCC PFGIEWTINDEAFHHEGEHASAHHKVYRLPAHQWATLRFVNESSRLHPMHVHGQFFRVVA CEEEEEEECCHHHCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEECCCEEEEEE RNGASVDEGHWRDTVLIRPRETVDVAMFPQDVGAWMLHCHIQEHAEAGMMTLVDVHAEGS CCCCCCCCCCCCCEEEECCCCCEEEEECCHHHCEEEEEEEEHHHCCCCEEEEEEEECCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA