| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762100
Identifier: 108762100
GI number: 108762100
Start: 6260502
End: 6262190
Strand: Reverse
Name: 108762100
Synonym: MXAN_5010
Alternate gene names: NA
Gene position: 6262190-6260502 (Counterclockwise)
Preceding gene: 108761279
Following gene: 108758803
Centisome position: 68.52
GC content: 60.04
Gene sequence:
>1689_bases GTGCGGCGAACCCTGACCTTCCATGCTCTGCCTCTCATCCTGATGTTCGTGGGTGGCCTTCTCATCACGGGTTGTGGTGG ATCCGACGATGCGCTGACATCATTCGAACAAGAGGCGACCGTCGATGCTGACTCGGCAGGGCTTTACGCCGCCTCGGCGT ACATTTGGGATTCTCGAACCATCTCCGTCTGCTGGGAGAACCCATCGGCCGCTGGCGATGTCGAACGAGAATGGGTGCGG AGCGCGGTCGAGGGCACCTGGGGCCTGATCACGCCGCTCGACTTCACTGGCTGGGGGGCGTGTCTCTGGAATCCGGGGAG CATCCGCATCCTCATCGAAGATACCTCCGATGGCTCCTTTACGTATGGCTTGGGGTGGAACAATGAGGCGCTCTCTGATG CCATGGTGCTCAACCTCACTTTCCAGCATTGGATGCAGAACTGTCAGGACACGCGAGAGCGCTGCATTCGTGCCATGGCG GTTCACGAATTCGGTCATGCGCTCGGCTTCGCTAATGAGGAGGCGAGAATCAGTTCGTCCAGTTGTCGGGGGAGGGGGGC TGACGACGCCGACACGGTGTTCGGGGAAGAAGTAGATTCCGATTCGGTCATGTATGAATGTGGCGACAGTCGCTGGCGTC GGGGCGGTCGGTTGAGTCAGTATGATATCAAGGGTGCCACCCTGCTCTACGGTGACTCGATGTGGGGGCGCCAGTTTGGA GCTGACCAAAGCGCTGGGGGGTGGGAGGTGGGCTACCACGAGCGTGTCATGGGGGATGTCACTGGGGATGGACTCCCTGA CATCGTCGGCTTCGGCTATGCGGGCGTGTTTGTCTCCCGGACCGTGTACGTGCCCCCATCTTTAGATGCCGGTTACTTCG CTCCCTCGCTGCTCCATCTTCAAGCTTTCGGCTATGCTCAGAACTGGCGCGTGGACCGGCACCCACGTACCGTCGCGGAC GTCAATGGCGATGGCAAGGCGGATCTCATTGGCTTCCATGACGCTGGCGTACACGTCGCGCTGTCGAATGGCTTCGGCTT TGGTTCGCCCCAGTTCTGGGTGGGGGATTTTGGCTACAATGTCGGTCAATGGCGAGTGGAGAGCCATGTGCGCACCGTCG CGGATGTCAATGGTGATGGTAAGGCAGATGTCGTTGGGTTTGGTGATGCGGGTGTATATGTTTCTCTTTCCACGGGCTCT TCGTTCGGTGCTTCGAGGCTCTGGTTGGGAGATTTTGGCGTAAACCAGCAGTGGTTTGTGCCCTATACCGTGCGCGCCGT CGCGGACGTCAACGGCGATGGCAGGGCGGACATCGTTGGCTTCTCCAAGAGTGGCGTATACGTCGCGCTGGCCAACAACA CGGGCACTGGCTTCAATCCCACCCAGCAATGGACTTCTGAGTTCACCTGGGACCAGGGATGGCGTGTGGATCGCCATGTG CGCACCGTCGCGGACGTCGATGGTGATGGCAAGGCCGACATTGTTGGGTTTGGAGAGAAAGAGACCCGCGCCGCCCTGTC GACGGGCTCCAGCTTCTCTGCGTCCACGCTCATGTCGCCGGATTTTGTCTACGGTGTCGGAGACTGGCGCGTGAACAGGC ACCCTCGCTTCGCCGTGGACATCAACAACGATGACCGAGCCGACCTCATCGGTTTTGGCGACCTGGGTGAGTACGTGAAG CTGCGCTGA
Upstream 100 bases:
>100_bases AGGATCATGGTCCCGGTCATCTGCCCGTCTATCCATTGTTTCCGCCGTTGATAACCCATTCCGGAGCCGGACGGTCCCCG TCCAGACAAGTGAGAGCCTC
Downstream 100 bases:
>100_bases GCCAGATGATCCGCGTGCTTCGTGCTCCTGACGCGGGGGATGCGGCGCTGCGCCACACGTCCAGTCACAACCATGGCCGG GTGGCTGCCGCGTGTAGGTT
Product: FG-GAP repeat-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat-Containing Protein; Peptidase M; ATPase; Rhs Family Protein; Peptidase; FG-GAP Repeat Protein
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MRRTLTFHALPLILMFVGGLLITGCGGSDDALTSFEQEATVDADSAGLYAASAYIWDSRTISVCWENPSAAGDVEREWVR SAVEGTWGLITPLDFTGWGACLWNPGSIRILIEDTSDGSFTYGLGWNNEALSDAMVLNLTFQHWMQNCQDTRERCIRAMA VHEFGHALGFANEEARISSSSCRGRGADDADTVFGEEVDSDSVMYECGDSRWRRGGRLSQYDIKGATLLYGDSMWGRQFG ADQSAGGWEVGYHERVMGDVTGDGLPDIVGFGYAGVFVSRTVYVPPSLDAGYFAPSLLHLQAFGYAQNWRVDRHPRTVAD VNGDGKADLIGFHDAGVHVALSNGFGFGSPQFWVGDFGYNVGQWRVESHVRTVADVNGDGKADVVGFGDAGVYVSLSTGS SFGASRLWLGDFGVNQQWFVPYTVRAVADVNGDGRADIVGFSKSGVYVALANNTGTGFNPTQQWTSEFTWDQGWRVDRHV RTVADVDGDGKADIVGFGEKETRAALSTGSSFSASTLMSPDFVYGVGDWRVNRHPRFAVDINNDDRADLIGFGDLGEYVK LR
Sequences:
>Translated_562_residues MRRTLTFHALPLILMFVGGLLITGCGGSDDALTSFEQEATVDADSAGLYAASAYIWDSRTISVCWENPSAAGDVEREWVR SAVEGTWGLITPLDFTGWGACLWNPGSIRILIEDTSDGSFTYGLGWNNEALSDAMVLNLTFQHWMQNCQDTRERCIRAMA VHEFGHALGFANEEARISSSSCRGRGADDADTVFGEEVDSDSVMYECGDSRWRRGGRLSQYDIKGATLLYGDSMWGRQFG ADQSAGGWEVGYHERVMGDVTGDGLPDIVGFGYAGVFVSRTVYVPPSLDAGYFAPSLLHLQAFGYAQNWRVDRHPRTVAD VNGDGKADLIGFHDAGVHVALSNGFGFGSPQFWVGDFGYNVGQWRVESHVRTVADVNGDGKADVVGFGDAGVYVSLSTGS SFGASRLWLGDFGVNQQWFVPYTVRAVADVNGDGRADIVGFSKSGVYVALANNTGTGFNPTQQWTSEFTWDQGWRVDRHV RTVADVDGDGKADIVGFGEKETRAALSTGSSFSASTLMSPDFVYGVGDWRVNRHPRFAVDINNDDRADLIGFGDLGEYVK LR >Mature_562_residues MRRTLTFHALPLILMFVGGLLITGCGGSDDALTSFEQEATVDADSAGLYAASAYIWDSRTISVCWENPSAAGDVEREWVR SAVEGTWGLITPLDFTGWGACLWNPGSIRILIEDTSDGSFTYGLGWNNEALSDAMVLNLTFQHWMQNCQDTRERCIRAMA VHEFGHALGFANEEARISSSSCRGRGADDADTVFGEEVDSDSVMYECGDSRWRRGGRLSQYDIKGATLLYGDSMWGRQFG ADQSAGGWEVGYHERVMGDVTGDGLPDIVGFGYAGVFVSRTVYVPPSLDAGYFAPSLLHLQAFGYAQNWRVDRHPRTVAD VNGDGKADLIGFHDAGVHVALSNGFGFGSPQFWVGDFGYNVGQWRVESHVRTVADVNGDGKADVVGFGDAGVYVSLSTGS SFGASRLWLGDFGVNQQWFVPYTVRAVADVNGDGRADIVGFSKSGVYVALANNTGTGFNPTQQWTSEFTWDQGWRVDRHV RTVADVDGDGKADIVGFGEKETRAALSTGSSFSASTLMSPDFVYGVGDWRVNRHPRFAVDINNDDRADLIGFGDLGEYVK LR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61097; Mature: 61097
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTLTFHALPLILMFVGGLLITGCGGSDDALTSFEQEATVDADSAGLYAASAYIWDSRT CCCEEEHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCE ISVCWENPSAAGDVEREWVRSAVEGTWGLITPLDFTGWGACLWNPGSIRILIEDTSDGSF EEEEECCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCEEEECCCEEEEEEEECCCCCE TYGLGWNNEALSDAMVLNLTFQHWMQNCQDTRERCIRAMAVHEFGHALGFANEEARISSS EEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SCRGRGADDADTVFGEEVDSDSVMYECGDSRWRRGGRLSQYDIKGATLLYGDSMWGRQFG CCCCCCCCCHHHHCCCCCCCCCEEEECCCHHHHCCCCCCEEECCCEEEEECCCHHCHHCC ADQSAGGWEVGYHERVMGDVTGDGLPDIVGFGYAGVFVSRTVYVPPSLDAGYFAPSLLHL CCCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCHHEEEEEEEEEECCCCCCCCCCCHHEEE QAFGYAQNWRVDRHPRTVADVNGDGKADLIGFHDAGVHVALSNGFGFGSPQFWVGDFGYN EECCCHHCCEECCCCCEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEEECCCCC VGQWRVESHVRTVADVNGDGKADVVGFGDAGVYVSLSTGSSFGASRLWLGDFGVNQQWFV CCEEEEHHHHHEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCEEEC PYTVRAVADVNGDGRADIVGFSKSGVYVALANNTGTGFNPTQQWTSEFTWDQGWRVDRHV CEEEEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCEEHHHH RTVADVDGDGKADIVGFGEKETRAALSTGSSFSASTLMSPDFVYGVGDWRVNRHPRFAVD HEEECCCCCCCEEEEECCCHHHHHHHHCCCCCCHHHCCCCCEEEECCCEEECCCCEEEEE INNDDRADLIGFGDLGEYVKLR CCCCCCCEEEEECCCCCCEECC >Mature Secondary Structure MRRTLTFHALPLILMFVGGLLITGCGGSDDALTSFEQEATVDADSAGLYAASAYIWDSRT CCCEEEHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCE ISVCWENPSAAGDVEREWVRSAVEGTWGLITPLDFTGWGACLWNPGSIRILIEDTSDGSF EEEEECCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCEEEECCCEEEEEEEECCCCCE TYGLGWNNEALSDAMVLNLTFQHWMQNCQDTRERCIRAMAVHEFGHALGFANEEARISSS EEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SCRGRGADDADTVFGEEVDSDSVMYECGDSRWRRGGRLSQYDIKGATLLYGDSMWGRQFG CCCCCCCCCHHHHCCCCCCCCCEEEECCCHHHHCCCCCCEEECCCEEEEECCCHHCHHCC ADQSAGGWEVGYHERVMGDVTGDGLPDIVGFGYAGVFVSRTVYVPPSLDAGYFAPSLLHL CCCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCHHEEEEEEEEEECCCCCCCCCCCHHEEE QAFGYAQNWRVDRHPRTVADVNGDGKADLIGFHDAGVHVALSNGFGFGSPQFWVGDFGYN EECCCHHCCEECCCCCEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEEECCCCC VGQWRVESHVRTVADVNGDGKADVVGFGDAGVYVSLSTGSSFGASRLWLGDFGVNQQWFV CCEEEEHHHHHEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCEEEC PYTVRAVADVNGDGRADIVGFSKSGVYVALANNTGTGFNPTQQWTSEFTWDQGWRVDRHV CEEEEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCEEHHHH RTVADVDGDGKADIVGFGEKETRAALSTGSSFSASTLMSPDFVYGVGDWRVNRHPRFAVD HEEECCCCCCCEEEEECCCHHHHHHHHCCCCCCHHHCCCCCEEEECCCEEECCCCEEEEE INNDDRADLIGFGDLGEYVKLR CCCCCCCEEEEECCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA