| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is tldD [C]
Identifier: 108762043
GI number: 108762043
Start: 1917230
End: 1918633
Strand: Direct
Name: tldD [C]
Synonym: MXAN_1615
Alternate gene names: 108762043
Gene position: 1917230-1918633 (Clockwise)
Preceding gene: 108762719
Following gene: 108756847
Centisome position: 20.98
GC content: 71.51
Gene sequence:
>1404_bases GTGTGTCGGCGGAGGCAGTGGATGCGGGGCGGTTCCGGTTCCGAGGAGGACAGCGGGGTGGCGGCATACGCGGGCCTTCA GCCTCGCGAATGGCTGACGTCCGCTGGCGAAGCGCTGGAGGGCTTCACGCGGCACCACGCACCCTCGCAGGCCGAGCTGT TCCTCGCCGCGGAGCGCAGGCTGTCGTTCGAATACGACGCCGGGACGGGGCGCTCCATCGTCAACCAGGGGGAGACCATG GATGCCATGGCGCGCGTGAGCTGGGACGCGCGGCAGGGCATGTTGACCGCGCCGGTGGGTGAGACAGGCGCGCTGCCGCT GCTCCTGGAGCGCACCGCGCGACAGGCCACTTCAGGACGTGCGAGTCCGCTGCCAGAGCTTCCAGCTCAGAGCGATTCCC CGAGTGTCTCGAGTCCTCCTCCGCTCCAGCCGGAGCGCGCGGCGCGCCGGATGAAACACTTCATCGAGACCGCCGTGCCC CCTGGCAGCGTCGTGCAGGCCGCGCTGCTCACCCAGGTGTCCACGTGGCGCGCCCTGGTGCGCGCAAGTGGCGCGCGCCG TGCTCGCACGGAATGGCGCGAGGAACTGTTCGTGCGCTGTGAGACGCCGCGAGGCGCCGTGGTGGATGCGGTGGCGTTTC CCGAAACAGCGGCGGACGACACGGTCATCATTCCGCTGCGCCATCGACTCGCGGAGGCTGTAGCTGCCCTCACGGGCCCC GCGGAGTCGCTGGACCGCGACCTCCCCCTGGTGCTGCGGCCGGCGGTGGCCGCGCCTCTCGCGGCGGGGCTCATCTGGTT GCTACGGGGCGACGTGGCCGCGGCCACACCCGCCCTGGCCCGGGCCGTGGGGCGCAAGTTGTTCCCCTCGGTCCTGAGCG TGGTGGACGACCCGAACCACCCCACGGGCACGCGGCGCGTATCCATGGATGATGAAGGACTCTCCACAGACACGCTGTCG CTGGTCGACGCGGGCGTGCTGCGAGGCTTCCTTCACGCCTCCGACACCGCATCGCGGCTCGGCGCGCCGCTCAACGGGCG TGGCTTCCGCACCAGCATGTCACCACCCACGCCCGAAGCCGTGAATCCCTTCCTCGTGCCCGGTGAGACCGCCGTGCTCC CCGCGCACTACACGGAACTCGTCGCGCGCGTGGAGACCTTCACCACCATGCCGCGTCCCGGCACCGTCACGTTGGTGGCG GGCGGCTGGGAGGTACGCGACGGCCGTCGTGTGCGCCGCATCGCTCCGGTGGAACTGGAGCTCCCCGTGCTGGAGACCTT CCGCGCGCTGCGCGGCGTGGGGACGGACCTGACCTTTTTCCCCACCGCCGAGGGCTGTGGCACGCCGACGCTCGTCTTCC CGCCCCTGCTGTCGGGTGCCCAGGGAGGGCAGGCGGCCAGGTGA
Upstream 100 bases:
>100_bases GCACGGACGGACGGTTGAACCACCGATACGGAATCCGCGCGACAACGCGGAGCGTCCCCACGCGAGGACGGAGACCGGTA TCCTCACGAGCAGTCCCAGC
Downstream 100 bases:
>100_bases AGTCCACGTCCCTTGGGGCGGCGCGGGGCCAGCCAGGCGACGCGGGCCCGCCTGCCCTGCGAGCAGGACGCGCGCTGTCT TCGAATCCGGTGCATGCTGC
Product: TldD/PmbA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MCRRRQWMRGGSGSEEDSGVAAYAGLQPREWLTSAGEALEGFTRHHAPSQAELFLAAERRLSFEYDAGTGRSIVNQGETM DAMARVSWDARQGMLTAPVGETGALPLLLERTARQATSGRASPLPELPAQSDSPSVSSPPPLQPERAARRMKHFIETAVP PGSVVQAALLTQVSTWRALVRASGARRARTEWREELFVRCETPRGAVVDAVAFPETAADDTVIIPLRHRLAEAVAALTGP AESLDRDLPLVLRPAVAAPLAAGLIWLLRGDVAAATPALARAVGRKLFPSVLSVVDDPNHPTGTRRVSMDDEGLSTDTLS LVDAGVLRGFLHASDTASRLGAPLNGRGFRTSMSPPTPEAVNPFLVPGETAVLPAHYTELVARVETFTTMPRPGTVTLVA GGWEVRDGRRVRRIAPVELELPVLETFRALRGVGTDLTFFPTAEGCGTPTLVFPPLLSGAQGGQAAR
Sequences:
>Translated_467_residues MCRRRQWMRGGSGSEEDSGVAAYAGLQPREWLTSAGEALEGFTRHHAPSQAELFLAAERRLSFEYDAGTGRSIVNQGETM DAMARVSWDARQGMLTAPVGETGALPLLLERTARQATSGRASPLPELPAQSDSPSVSSPPPLQPERAARRMKHFIETAVP PGSVVQAALLTQVSTWRALVRASGARRARTEWREELFVRCETPRGAVVDAVAFPETAADDTVIIPLRHRLAEAVAALTGP AESLDRDLPLVLRPAVAAPLAAGLIWLLRGDVAAATPALARAVGRKLFPSVLSVVDDPNHPTGTRRVSMDDEGLSTDTLS LVDAGVLRGFLHASDTASRLGAPLNGRGFRTSMSPPTPEAVNPFLVPGETAVLPAHYTELVARVETFTTMPRPGTVTLVA GGWEVRDGRRVRRIAPVELELPVLETFRALRGVGTDLTFFPTAEGCGTPTLVFPPLLSGAQGGQAAR >Mature_467_residues MCRRRQWMRGGSGSEEDSGVAAYAGLQPREWLTSAGEALEGFTRHHAPSQAELFLAAERRLSFEYDAGTGRSIVNQGETM DAMARVSWDARQGMLTAPVGETGALPLLLERTARQATSGRASPLPELPAQSDSPSVSSPPPLQPERAARRMKHFIETAVP PGSVVQAALLTQVSTWRALVRASGARRARTEWREELFVRCETPRGAVVDAVAFPETAADDTVIIPLRHRLAEAVAALTGP AESLDRDLPLVLRPAVAAPLAAGLIWLLRGDVAAATPALARAVGRKLFPSVLSVVDDPNHPTGTRRVSMDDEGLSTDTLS LVDAGVLRGFLHASDTASRLGAPLNGRGFRTSMSPPTPEAVNPFLVPGETAVLPAHYTELVARVETFTTMPRPGTVTLVA GGWEVRDGRRVRRIAPVELELPVLETFRALRGVGTDLTFFPTAEGCGTPTLVFPPLLSGAQGGQAAR
Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]
COG id: COG0312
COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49819; Mature: 49819
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRRRQWMRGGSGSEEDSGVAAYAGLQPREWLTSAGEALEGFTRHHAPSQAELFLAAERR CCCCHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHC LSFEYDAGTGRSIVNQGETMDAMARVSWDARQGMLTAPVGETGALPLLLERTARQATSGR CEEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHCCC ASPLPELPAQSDSPSVSSPPPLQPERAARRMKHFIETAVPPGSVVQAALLTQVSTWRALV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RASGARRARTEWREELFVRCETPRGAVVDAVAFPETAADDTVIIPLRHRLAEAVAALTGP HHCCCHHHHHHHHHHHEEEECCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCC AESLDRDLPLVLRPAVAAPLAAGLIWLLRGDVAAATPALARAVGRKLFPSVLSVVDDPNH HHHHCCCCCEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PTGTRRVSMDDEGLSTDTLSLVDAGVLRGFLHASDTASRLGAPLNGRGFRTSMSPPTPEA CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHH VNPFLVPGETAVLPAHYTELVARVETFTTMPRPGTVTLVAGGWEVRDGRRVRRIAPVELE CCCEECCCCCEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCEECCCEEE LPVLETFRALRGVGTDLTFFPTAEGCGTPTLVFPPLLSGAQGGQAAR CHHHHHHHHHHCCCCCEEEEECCCCCCCCCEECCHHHCCCCCCCCCC >Mature Secondary Structure MCRRRQWMRGGSGSEEDSGVAAYAGLQPREWLTSAGEALEGFTRHHAPSQAELFLAAERR CCCCHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHC LSFEYDAGTGRSIVNQGETMDAMARVSWDARQGMLTAPVGETGALPLLLERTARQATSGR CEEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHCCC ASPLPELPAQSDSPSVSSPPPLQPERAARRMKHFIETAVPPGSVVQAALLTQVSTWRALV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RASGARRARTEWREELFVRCETPRGAVVDAVAFPETAADDTVIIPLRHRLAEAVAALTGP HHCCCHHHHHHHHHHHEEEECCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCC AESLDRDLPLVLRPAVAAPLAAGLIWLLRGDVAAATPALARAVGRKLFPSVLSVVDDPNH HHHHCCCCCEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PTGTRRVSMDDEGLSTDTLSLVDAGVLRGFLHASDTASRLGAPLNGRGFRTSMSPPTPEA CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHH VNPFLVPGETAVLPAHYTELVARVETFTTMPRPGTVTLVAGGWEVRDGRRVRRIAPVELE CCCEECCCCCEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCEECCCEEE LPVLETFRALRGVGTDLTFFPTAEGCGTPTLVFPPLLSGAQGGQAAR CHHHHHHHHHHCCCCCEEEEECCCCCCCCCEECCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA