| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762022
Identifier: 108762022
GI number: 108762022
Start: 2512352
End: 2513320
Strand: Reverse
Name: 108762022
Synonym: MXAN_2171
Alternate gene names: NA
Gene position: 2513320-2512352 (Counterclockwise)
Preceding gene: 108760512
Following gene: 108763175
Centisome position: 27.5
GC content: 53.04
Gene sequence:
>969_bases ATGAGCACTTCAGGTCTCTTCGCCGTCCAGAGCGCTTCCGGAAGCGAACTGGATGCCCACTTCTCGCTGGAGCTGTTGCA GGGCGAAACTACACTGCTCTTCGAATCGAAGGGAGGTGGAAAAGACTCTCCCCTTGGCAAGAGAAGAAATCAAGACTACG ACCCGGGACTCCGACTTATATTGGAGCGACTAGCGCAAAGAGGCGCTAAAATTCGGGATGCCTCTGTTGATTCCGACAAT GTACTGGACGCTGGATTGCCTATCGAACAGCGCCGTCTGAATGTGCGAGCTCCCTTCAAACTTCCTGTAGACCTATCCCT CATCGATGACTTTGACAAGCTGAGAAAAGCCCTAAGTGCTGCGCAAAAGCCGATTGGACAACGTGCTAACGCGAAGGGCG GAAACGGGCAGAAGAAGATTCGTCTCTACCTCGATCTCAACACTCAAGGGACAGATCTACACAGTCTAGGGAGATCGCTC GCCACGCCCACGCGATCAATAGTCATGTCCGCAGGTGACATTGCCAATACTGCCGAGACGATTAGTGCGAGCGGTCATTT TGATCCCCACAGCATTGAAGATGCCAGAGCCCGCACGCTTAGTGCAATCGTCCAGCGACAGGGGCAGTCGGCATTTCGAA AGAGCTTGCTTGAGGCATACGGCAACAGGTGCGCCATCACAGAGTGTGATCTCGAGGAGGTTCTCGAGGCTGCACATATC CTTCCGTTTAAAGGACCTGCGACCAATACCCTCGAGAATGGGCTGCTTTTAAGGGCGGACATTCACACTCTTTTTGATCG AGGATTGATTGCGGTCGACACCGCCAACTGGACCATTCTGACTCACGCGAGAATTACATCCACTCAATACGCCAGCCTAA ACAAACAACATCTCCGACTACCTTCTCGCCCTGAACTGCACCCAAGCACGGTCGCACTTAACAAGCACAGGGTCGAATCT GGACTCTGA
Upstream 100 bases:
>100_bases ACAATGGTAACTTCATGCCGCTGGGAGTTCCCTAGACATCTGGCATTGGCGCTACTTCGGCCAACGACGTATCTCGTATC TCCTCTACCAGGAAGCAGCC
Downstream 100 bases:
>100_bases CGCCGCGGATCTCATTCACGTCGACTCTCCACATGACCCTTCGATAAACCGGCGCCCGTCACTAGGGCATCAACCATTGT TCTCATGACTTAAATCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; Restriction Endonuclease-Like Protein; Restriction -Related Protein
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSTSGLFAVQSASGSELDAHFSLELLQGETTLLFESKGGGKDSPLGKRRNQDYDPGLRLILERLAQRGAKIRDASVDSDN VLDAGLPIEQRRLNVRAPFKLPVDLSLIDDFDKLRKALSAAQKPIGQRANAKGGNGQKKIRLYLDLNTQGTDLHSLGRSL ATPTRSIVMSAGDIANTAETISASGHFDPHSIEDARARTLSAIVQRQGQSAFRKSLLEAYGNRCAITECDLEEVLEAAHI LPFKGPATNTLENGLLLRADIHTLFDRGLIAVDTANWTILTHARITSTQYASLNKQHLRLPSRPELHPSTVALNKHRVES GL
Sequences:
>Translated_322_residues MSTSGLFAVQSASGSELDAHFSLELLQGETTLLFESKGGGKDSPLGKRRNQDYDPGLRLILERLAQRGAKIRDASVDSDN VLDAGLPIEQRRLNVRAPFKLPVDLSLIDDFDKLRKALSAAQKPIGQRANAKGGNGQKKIRLYLDLNTQGTDLHSLGRSL ATPTRSIVMSAGDIANTAETISASGHFDPHSIEDARARTLSAIVQRQGQSAFRKSLLEAYGNRCAITECDLEEVLEAAHI LPFKGPATNTLENGLLLRADIHTLFDRGLIAVDTANWTILTHARITSTQYASLNKQHLRLPSRPELHPSTVALNKHRVES GL >Mature_321_residues STSGLFAVQSASGSELDAHFSLELLQGETTLLFESKGGGKDSPLGKRRNQDYDPGLRLILERLAQRGAKIRDASVDSDNV LDAGLPIEQRRLNVRAPFKLPVDLSLIDDFDKLRKALSAAQKPIGQRANAKGGNGQKKIRLYLDLNTQGTDLHSLGRSLA TPTRSIVMSAGDIANTAETISASGHFDPHSIEDARARTLSAIVQRQGQSAFRKSLLEAYGNRCAITECDLEEVLEAAHIL PFKGPATNTLENGLLLRADIHTLFDRGLIAVDTANWTILTHARITSTQYASLNKQHLRLPSRPELHPSTVALNKHRVESG L
Specific function: Unknown
COG id: COG3440
COG function: function code V; Predicted restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35066; Mature: 34935
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSGLFAVQSASGSELDAHFSLELLQGETTLLFESKGGGKDSPLGKRRNQDYDPGLRLI CCCCCEEEEECCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH LERLAQRGAKIRDASVDSDNVLDAGLPIEQRRLNVRAPFKLPVDLSLIDDFDKLRKALSA HHHHHHCCCEEEECCCCCCCCEECCCCHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHH AQKPIGQRANAKGGNGQKKIRLYLDLNTQGTDLHSLGRSLATPTRSIVMSAGDIANTAET HHHCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHHHHEECCCCCCHHHH ISASGHFDPHSIEDARARTLSAIVQRQGQSAFRKSLLEAYGNRCAITECDLEEVLEAAHI HCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHC LPFKGPATNTLENGLLLRADIHTLFDRGLIAVDTANWTILTHARITSTQYASLNKQHLRL CCCCCCCCCHHHCCEEEEEHHHHHHHCCEEEEECCCEEEEEEEEECCHHHHHCCHHHCCC PSRPELHPSTVALNKHRVESGL CCCCCCCCCEEEEHHHHHCCCC >Mature Secondary Structure STSGLFAVQSASGSELDAHFSLELLQGETTLLFESKGGGKDSPLGKRRNQDYDPGLRLI CCCCEEEEECCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH LERLAQRGAKIRDASVDSDNVLDAGLPIEQRRLNVRAPFKLPVDLSLIDDFDKLRKALSA HHHHHHCCCEEEECCCCCCCCEECCCCHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHH AQKPIGQRANAKGGNGQKKIRLYLDLNTQGTDLHSLGRSLATPTRSIVMSAGDIANTAET HHHCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHHHHEECCCCCCHHHH ISASGHFDPHSIEDARARTLSAIVQRQGQSAFRKSLLEAYGNRCAITECDLEEVLEAAHI HCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHC LPFKGPATNTLENGLLLRADIHTLFDRGLIAVDTANWTILTHARITSTQYASLNKQHLRL CCCCCCCCCHHHCCEEEEEHHHHHHHCCEEEEECCCEEEEEEEEECCHHHHHCCHHHCCC PSRPELHPSTVALNKHRVESGL CCCCCCCCCEEEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA