| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762014
Identifier: 108762014
GI number: 108762014
Start: 2736078
End: 2737631
Strand: Direct
Name: 108762014
Synonym: MXAN_2354
Alternate gene names: NA
Gene position: 2736078-2737631 (Clockwise)
Preceding gene: 108756953
Following gene: 108764081
Centisome position: 29.94
GC content: 71.56
Gene sequence:
>1554_bases GTGGCAACATCCGCCGTCATGCAATTCACCCTGAACCGGGGCGTCAGTCTGGCTGTGCTTGCCTCAGCCCGGACGGAGGA CGACCACCACGCGGACCTGGGCTGTAGCATTCAGGGCCCCACCGCGCGTCCTGTCCGCCGGGCCTTTTTCCCACTGAAGC GGCACGTCGCCACGCTGGGGCGTGAGGGAGCGCTGCACGATGCGGAGGCGCTCTTGCGTTGGCTGGAAGACACCCCGCGC TATGCCGCGCTGTGCATGGGCAAGCAGCGGCGCATGGGCCGACGCGTGTTGCGTCCCGACGTGCTGTTCCCGGTGGCCAC GCGACACCGGCCGCGCGTGCTGCACCTTCGCCAGGAGGAACTGGGCCTGGATGTACCCGTGCGTGCGTCCGAGTGGCCCG CCGTGGCGGACTTCTTCGCGGCGCTCGCGCGCGGCGCCACGCGCGCGGAGCTTCGGGCCTTCGCGGCGCTGCCCGTGCTG GCGGAGTTGGTGGCGGACCTGGGGCAGGCGGGCTGGCTCGTGCGCCATGAGGCGCCCGTGGAGGTGCCTTCGCCCGGTGC GCTCTTCGTGGGGCACAACACGGTGCTGGTCGCGGGCCGCGAGGGACGCGTGCTGGTGGACCCGTACTTCCGGCCCGAGG GTGCGGTGGACGCGCCGGGCTATCCGCCGATGCAGCCCCGCGACGTGGGACGCGTGGACGCGGTGGTCATCACCCATTCA CATGGGGACCACTTCCACCTGGGCTCGTTGCTGCAATTGCCTCGCGACACGCGCATCTTCGTGCCGGCGGTGGCGCGTGA GAGTCTCTTCTCCACGGACTGTGCTCTGCGACTGGCGCAGCTGGGCTTCACGCGCGTGGAGCCCTTGTGCTGGGGCGAGT CCCGGCAGGTGGGCGACGTCACCGTGCGCGCGCTGCCGTTCTACGGCGAGCAGCCCACGGATGGAGAAGGCCCGTACCCG GACCTCTTCAATGAGGGCAACGCGTGGCTTGTGCGGGCGCCCGGCTTCTCCGCGGCGTTCTTCGCGGACTCGGGGCACGA CGTGCGCGGAGACATGGCGGCGGTGTGCCGGCGCGTGCGTCGCGAGGCTCCAGTGGACGTGCTCTTCTGCGGCGTCCGCG GCTTTCGGCTGGCGCCCATCTTCTTTGGCTTCACCACGCTGGAGGCGTTCCTGGTCAACGTCCCCCGCGCCATGCTGAAG GCGCCGCAGCGGCTCATGGCCGGGCCCGAGGAGGCGCTGCGCTATGGCGCCTTGCTGGGCGCGCGCTACGTGGTGCCCTG CGCGGATGGCGGGGCGCCCTGGTACTGGCGCGAGGGCATGGGGCCTCGCTACGCGGGCTACCCCGGCGAGCCCGTGAGCG GCGCCAGTCACCTGGATGAGAACCCGGACGCGGACCCCTATCCGGAGCGGCTCGCCGAGGTCCGGCGGACGATGAAGGAC GTTCCCAGTCCCCTGGTGCTGCGGCCGGGAGAGTCGCTGCGCTGGAAGGGCGCGAGGACACCGGAGGTGGTGCGCCACCC TGGCTTCGTGTGGCCTTTCGGCGACGCGGCGTGA
Upstream 100 bases:
>100_bases CCGGCCTTCCACGCTCCTGTCACAACCTGGGCGGTCGGGTGAGGGGGACGGGCCGCCCGCTCGCCCGAACGTTGGAGAAA CACCGCACCGCGCGTGACGC
Downstream 100 bases:
>100_bases CGCGTCCGCCGCGCGGGGACTCAGCGCGCGGCGAGCCGGGCCCGGCCTCGCACGAACTGCACCACGTACACCCCGGCGAC CACCGCGAAGCACACGGTGG
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Antibiotic Biosynthesis Protein; Metallo-Beta-Lactamase Family Protein
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MATSAVMQFTLNRGVSLAVLASARTEDDHHADLGCSIQGPTARPVRRAFFPLKRHVATLGREGALHDAEALLRWLEDTPR YAALCMGKQRRMGRRVLRPDVLFPVATRHRPRVLHLRQEELGLDVPVRASEWPAVADFFAALARGATRAELRAFAALPVL AELVADLGQAGWLVRHEAPVEVPSPGALFVGHNTVLVAGREGRVLVDPYFRPEGAVDAPGYPPMQPRDVGRVDAVVITHS HGDHFHLGSLLQLPRDTRIFVPAVARESLFSTDCALRLAQLGFTRVEPLCWGESRQVGDVTVRALPFYGEQPTDGEGPYP DLFNEGNAWLVRAPGFSAAFFADSGHDVRGDMAAVCRRVRREAPVDVLFCGVRGFRLAPIFFGFTTLEAFLVNVPRAMLK APQRLMAGPEEALRYGALLGARYVVPCADGGAPWYWREGMGPRYAGYPGEPVSGASHLDENPDADPYPERLAEVRRTMKD VPSPLVLRPGESLRWKGARTPEVVRHPGFVWPFGDAA
Sequences:
>Translated_517_residues MATSAVMQFTLNRGVSLAVLASARTEDDHHADLGCSIQGPTARPVRRAFFPLKRHVATLGREGALHDAEALLRWLEDTPR YAALCMGKQRRMGRRVLRPDVLFPVATRHRPRVLHLRQEELGLDVPVRASEWPAVADFFAALARGATRAELRAFAALPVL AELVADLGQAGWLVRHEAPVEVPSPGALFVGHNTVLVAGREGRVLVDPYFRPEGAVDAPGYPPMQPRDVGRVDAVVITHS HGDHFHLGSLLQLPRDTRIFVPAVARESLFSTDCALRLAQLGFTRVEPLCWGESRQVGDVTVRALPFYGEQPTDGEGPYP DLFNEGNAWLVRAPGFSAAFFADSGHDVRGDMAAVCRRVRREAPVDVLFCGVRGFRLAPIFFGFTTLEAFLVNVPRAMLK APQRLMAGPEEALRYGALLGARYVVPCADGGAPWYWREGMGPRYAGYPGEPVSGASHLDENPDADPYPERLAEVRRTMKD VPSPLVLRPGESLRWKGARTPEVVRHPGFVWPFGDAA >Mature_516_residues ATSAVMQFTLNRGVSLAVLASARTEDDHHADLGCSIQGPTARPVRRAFFPLKRHVATLGREGALHDAEALLRWLEDTPRY AALCMGKQRRMGRRVLRPDVLFPVATRHRPRVLHLRQEELGLDVPVRASEWPAVADFFAALARGATRAELRAFAALPVLA ELVADLGQAGWLVRHEAPVEVPSPGALFVGHNTVLVAGREGRVLVDPYFRPEGAVDAPGYPPMQPRDVGRVDAVVITHSH GDHFHLGSLLQLPRDTRIFVPAVARESLFSTDCALRLAQLGFTRVEPLCWGESRQVGDVTVRALPFYGEQPTDGEGPYPD LFNEGNAWLVRAPGFSAAFFADSGHDVRGDMAAVCRRVRREAPVDVLFCGVRGFRLAPIFFGFTTLEAFLVNVPRAMLKA PQRLMAGPEEALRYGALLGARYVVPCADGGAPWYWREGMGPRYAGYPGEPVSGASHLDENPDADPYPERLAEVRRTMKDV PSPLVLRPGESLRWKGARTPEVVRHPGFVWPFGDAA
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56776; Mature: 56644
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSAVMQFTLNRGVSLAVLASARTEDDHHADLGCSIQGPTARPVRRAFFPLKRHVATLG CCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHC REGALHDAEALLRWLEDTPRYAALCMGKQRRMGRRVLRPDVLFPVATRHRPRVLHLRQEE CCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHH LGLDVPVRASEWPAVADFFAALARGATRAELRAFAALPVLAELVADLGQAGWLVRHEAPV CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC EVPSPGALFVGHNTVLVAGREGRVLVDPYFRPEGAVDAPGYPPMQPRDVGRVDAVVITHS CCCCCCEEEEECCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC HGDHFHLGSLLQLPRDTRIFVPAVARESLFSTDCALRLAQLGFTRVEPLCWGESRQVGDV CCCCEECHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHCCCEECCCCCCCCCE TVRALPFYGEQPTDGEGPYPDLFNEGNAWLVRAPGFSAAFFADSGHDVRGDMAAVCRRVR EEEEEECCCCCCCCCCCCCCHHCCCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHH REAPVDVLFCGVRGFRLAPIFFGFTTLEAFLVNVPRAMLKAPQRLMAGPEEALRYGALLG HHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHCCHHHHHHHHHHHC ARYVVPCADGGAPWYWREGMGPRYAGYPGEPVSGASHLDENPDADPYPERLAEVRRTMKD CCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VPSPLVLRPGESLRWKGARTPEVVRHPGFVWPFGDAA CCCCEEECCCCCCEECCCCCCHHHHCCCEECCCCCCC >Mature Secondary Structure ATSAVMQFTLNRGVSLAVLASARTEDDHHADLGCSIQGPTARPVRRAFFPLKRHVATLG CCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHC REGALHDAEALLRWLEDTPRYAALCMGKQRRMGRRVLRPDVLFPVATRHRPRVLHLRQEE CCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHH LGLDVPVRASEWPAVADFFAALARGATRAELRAFAALPVLAELVADLGQAGWLVRHEAPV CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC EVPSPGALFVGHNTVLVAGREGRVLVDPYFRPEGAVDAPGYPPMQPRDVGRVDAVVITHS CCCCCCEEEEECCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC HGDHFHLGSLLQLPRDTRIFVPAVARESLFSTDCALRLAQLGFTRVEPLCWGESRQVGDV CCCCEECHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHCCCEECCCCCCCCCE TVRALPFYGEQPTDGEGPYPDLFNEGNAWLVRAPGFSAAFFADSGHDVRGDMAAVCRRVR EEEEEECCCCCCCCCCCCCCHHCCCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHH REAPVDVLFCGVRGFRLAPIFFGFTTLEAFLVNVPRAMLKAPQRLMAGPEEALRYGALLG HHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHCCHHHHHHHHHHHC ARYVVPCADGGAPWYWREGMGPRYAGYPGEPVSGASHLDENPDADPYPERLAEVRRTMKD CCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VPSPLVLRPGESLRWKGARTPEVVRHPGFVWPFGDAA CCCCEEECCCCCCEECCCCCCHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA