Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is yjlB [H]

Identifier: 108761975

GI number: 108761975

Start: 2761795

End: 2762412

Strand: Direct

Name: yjlB [H]

Synonym: MXAN_2374

Alternate gene names: 108761975

Gene position: 2761795-2762412 (Clockwise)

Preceding gene: 108756954

Following gene: 108761463

Centisome position: 30.22

GC content: 69.42

Gene sequence:

>618_bases
ATGACGCGTCTTCAGCGCCGGTTGCTTCGCGGCGCCCTGGCCACCACCTTCCTGCTGGGAGCTCCGGGCATGACACAGAC
GACACTCCAACCGTCCACGTCGAAGGTGCAGCAGGCGGCATCACCTGAACGGCTGCTGTTCAAGGATGACGGGATGACGC
CGAACAGCCGCTTGCCCACGCTCGTCTATCGCGGCGTGACGCTGGAAGGGGACAAGGCGAGCGCGCTGGAGACGCTGTTC
TCCGCGAATGGCTGGCCGGCGCGCTGGCGGTACACCGTCTATGACTTCCACCACTACCACTCCAATGCGCACGAGGTGCT
GGGCGTGGCTGCCGGCACCGCGCGGCTGAAGCTGGGCGGCGAGTCCGGGCAGGAGGTCACCGTCCAGGCCGGCGATGTGC
TGGTGCTCCCCGCGGGCACGGGCCACCGCCGGTTGGAGGCCAGTAGGGACTTCCTGGTGGTGGGCGGCTACCCGGGGGGG
ACGGGCGATTACGACTTGCAGCGCCCGGAGAAGGCGACGCACGACGCCTCCGTCCAGCGGATTGCCCAGGTGCCCCTGCC
CGGGGCGGACCCGGTGACGGGCAAGCAGGGCGTGTTGTCCTCGGCCTGGAAGCCGTAG

Upstream 100 bases:

>100_bases
CCGTCGACGAGCATCGACGACCTCTCCCGCATCGAGTCGGTGTGGCACCGAGGCAAGCAGGTGCCGGGGCCCACCTCGGC
CCCCGCCCAGGAGTGAGGCG

Downstream 100 bases:

>100_bases
CGCCTCAGCGACGCTCCACGGCGACCGTGCCGCCCTTCATCACCCAGCGCACCTTGCGCAGGGTGGTGATGTCCTTCGTT
GGATCTCCCTCCACCGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTRLQRRLLRGALATTFLLGAPGMTQTTLQPSTSKVQQAASPERLLFKDDGMTPNSRLPTLVYRGVTLEGDKASALETLF
SANGWPARWRYTVYDFHHYHSNAHEVLGVAAGTARLKLGGESGQEVTVQAGDVLVLPAGTGHRRLEASRDFLVVGGYPGG
TGDYDLQRPEKATHDASVQRIAQVPLPGADPVTGKQGVLSSAWKP

Sequences:

>Translated_205_residues
MTRLQRRLLRGALATTFLLGAPGMTQTTLQPSTSKVQQAASPERLLFKDDGMTPNSRLPTLVYRGVTLEGDKASALETLF
SANGWPARWRYTVYDFHHYHSNAHEVLGVAAGTARLKLGGESGQEVTVQAGDVLVLPAGTGHRRLEASRDFLVVGGYPGG
TGDYDLQRPEKATHDASVQRIAQVPLPGADPVTGKQGVLSSAWKP
>Mature_204_residues
TRLQRRLLRGALATTFLLGAPGMTQTTLQPSTSKVQQAASPERLLFKDDGMTPNSRLPTLVYRGVTLEGDKASALETLFS
ANGWPARWRYTVYDFHHYHSNAHEVLGVAAGTARLKLGGESGQEVTVQAGDVLVLPAGTGHRRLEASRDFLVVGGYPGGT
GDYDLQRPEKATHDASVQRIAQVPLPGADPVTGKQGVLSSAWKP

Specific function: Unknown

COG id: COG4297

COG function: function code S; Uncharacterized protein containing double-stranded beta helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710
- InterPro:   IPR014500 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 22031; Mature: 21900

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLQRRLLRGALATTFLLGAPGMTQTTLQPSTSKVQQAASPERLLFKDDGMTPNSRLPT
CCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHCCCCEEEEECCCCCCCCCCCE
LVYRGVTLEGDKASALETLFSANGWPARWRYTVYDFHHYHSNAHEVLGVAAGTARLKLGG
EEEECEEECCCHHHHHHHHHHCCCCCCEEEEEEEEEEHHCCCHHHEEEEECCEEEEEECC
ESGQEVTVQAGDVLVLPAGTGHRRLEASRDFLVVGGYPGGTGDYDLQRPEKATHDASVQR
CCCCEEEEEECCEEEEECCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
IAQVPLPGADPVTGKQGVLSSAWKP
HHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRLQRRLLRGALATTFLLGAPGMTQTTLQPSTSKVQQAASPERLLFKDDGMTPNSRLPT
CHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHCCCCEEEEECCCCCCCCCCCE
LVYRGVTLEGDKASALETLFSANGWPARWRYTVYDFHHYHSNAHEVLGVAAGTARLKLGG
EEEECEEECCCHHHHHHHHHHCCCCCCEEEEEEEEEEHHCCCHHHEEEEECCEEEEEECC
ESGQEVTVQAGDVLVLPAGTGHRRLEASRDFLVVGGYPGGTGDYDLQRPEKATHDASVQR
CCCCEEEEEECCEEEEECCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
IAQVPLPGADPVTGKQGVLSSAWKP
HHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]