| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ravA [H]
Identifier: 108761972
GI number: 108761972
Start: 3383594
End: 3384616
Strand: Reverse
Name: ravA [H]
Synonym: MXAN_2895
Alternate gene names: 108761972
Gene position: 3384616-3383594 (Counterclockwise)
Preceding gene: 108761931
Following gene: 108759949
Centisome position: 37.03
GC content: 67.64
Gene sequence:
>1023_bases ATGAGCAGTCTTCCCGCCATCTCCGAGCTGACGTTCGACGCGCTCTCGAGCGAGGCCCACGGCCTTCGCGAGCGCCTCAA CCGCTTCCGCCTGGCGCTGGGCCGTCACTTCGTGGGCAAGCAGACGCTGGTGGACCTGATGACGGTGGCGGCGGTGGCGC AGGAGCCGCTGCTGCTCGTGGGCCCACCGGGCACGGCCAAGTCGGACCTGGTCCTCAAGTTCCGGGACGCGCTGCGCATC CCCAACGAGGATTACTTCGAGTACCTCCTGACGCGCTTCACCGAGCCGTCGGAGGTGCTGGGCCCCATCGACATCAACCT GCTGCGCCAGGGCCGCTACATCCGGCGCGAAGGCGGCAAGCTGCCCACGGCCCGGCTCGTCTTCCTCGACGAGGTCTTCA AGGCCAGCTCCGCCATCCTCAACGCGTTGCTCACCGTCATCAACGAGCGCAAATTCTACCAGGACGGCGCGCCGCAGCCG GTGAAGCTGAAGGTGCTCTTCGCCGCCACCAACGAGCTGCCCGAACACGCCGAGCTGGGCGCGCTCAAGGACCGCTTCTG CCTCAAGGCCGCGTGCCGTCCGGTGCAGGACCGCTACTTCCTGGAGCTGCTGGACTCCGGCCTGGATTCGCAGACGCACC GGGAGATGAACCAGAAGCCCTGGGCGGAAGGACACGCCACGCTGGACGACGTGCTCAAGGCCCATCGCTACCTGACGCTG ATGATGGGCAAGCGCGAGACGGGCCCGGACGGCCGCGAGCTGCGCGACCGCGACCTGTTCTTCCGCGATGACTTGCTGCG CGAGTTCCGCCGCGTGGTGCAGACGCTGACGCGCGAGGACGGCGTGTTCATCAGCGACCGCAAGCTGGTGAAGCTCTACC GCCTGCTCCGGACGCGGGCGTGGATCTTCCACGGCGGTGCGGTGGAGCGGCAGGACCTCCAGCTCCTCTCGTACCTGGGC GAGACGCGGGAAGAAATCGACCTGCTGGAGGAGAAGGTACCCCGGCTGCTGGGCCTCTCGTAA
Upstream 100 bases:
>100_bases TGGAGGTGGCGCAAGGCACCGGAGAGCGTGCACGAAGCTGGCTCGACGAAGACGAATTCCTGGTGCGACGGCGCATCCAT CGGGAGCTGGAGGAGCGCAC
Downstream 100 bases:
>100_bases CTCGACAAATTCATTAAAGCACAAATGATCATTAGAACAAGTGCTACCACCAAAAGATGGATTGACATCGTACTTCTTTC CATCGCGGGGGCCGCAGGAG
Product: AAA family ATPase
Products: NA
Alternate protein names: Regulatory ATPase variant A [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSSLPAISELTFDALSSEAHGLRERLNRFRLALGRHFVGKQTLVDLMTVAAVAQEPLLLVGPPGTAKSDLVLKFRDALRI PNEDYFEYLLTRFTEPSEVLGPIDINLLRQGRYIRREGGKLPTARLVFLDEVFKASSAILNALLTVINERKFYQDGAPQP VKLKVLFAATNELPEHAELGALKDRFCLKAACRPVQDRYFLELLDSGLDSQTHREMNQKPWAEGHATLDDVLKAHRYLTL MMGKRETGPDGRELRDRDLFFRDDLLREFRRVVQTLTREDGVFISDRKLVKLYRLLRTRAWIFHGGAVERQDLQLLSYLG ETREEIDLLEEKVPRLLGLS
Sequences:
>Translated_340_residues MSSLPAISELTFDALSSEAHGLRERLNRFRLALGRHFVGKQTLVDLMTVAAVAQEPLLLVGPPGTAKSDLVLKFRDALRI PNEDYFEYLLTRFTEPSEVLGPIDINLLRQGRYIRREGGKLPTARLVFLDEVFKASSAILNALLTVINERKFYQDGAPQP VKLKVLFAATNELPEHAELGALKDRFCLKAACRPVQDRYFLELLDSGLDSQTHREMNQKPWAEGHATLDDVLKAHRYLTL MMGKRETGPDGRELRDRDLFFRDDLLREFRRVVQTLTREDGVFISDRKLVKLYRLLRTRAWIFHGGAVERQDLQLLSYLG ETREEIDLLEEKVPRLLGLS >Mature_339_residues SSLPAISELTFDALSSEAHGLRERLNRFRLALGRHFVGKQTLVDLMTVAAVAQEPLLLVGPPGTAKSDLVLKFRDALRIP NEDYFEYLLTRFTEPSEVLGPIDINLLRQGRYIRREGGKLPTARLVFLDEVFKASSAILNALLTVINERKFYQDGAPQPV KLKVLFAATNELPEHAELGALKDRFCLKAACRPVQDRYFLELLDSGLDSQTHREMNQKPWAEGHATLDDVLKAHRYLTLM MGKRETGPDGRELRDRDLFFRDDLLREFRRVVQTLTREDGVFISDRKLVKLYRLLRTRAWIFHGGAVERQDLQLLSYLGE TREEIDLLEEKVPRLLGLS
Specific function: Functions as an ATPase. May play a role in metal insertion (metal-chelatase) or as a chaperone [H]
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ravA family [H]
Homologues:
Organism=Escherichia coli, GI87082326, Length=322, Percent_Identity=34.472049689441, Blast_Score=143, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR022547 [H]
Pfam domain/function: PF07728 AAA_5; PF12592 DUF3763 [H]
EC number: NA
Molecular weight: Translated: 38927; Mature: 38795
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLPAISELTFDALSSEAHGLRERLNRFRLALGRHFVGKQTLVDLMTVAAVAQEPLLLV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE GPPGTAKSDLVLKFRDALRIPNEDYFEYLLTRFTEPSEVLGPIDINLLRQGRYIRREGGK CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHCCCHHHHCCCC LPTARLVFLDEVFKASSAILNALLTVINERKFYQDGAPQPVKLKVLFAATNELPEHAELG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHH ALKDRFCLKAACRPVQDRYFLELLDSGLDSQTHREMNQKPWAEGHATLDDVLKAHRYLTL HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH MMGKRETGPDGRELRDRDLFFRDDLLREFRRVVQTLTREDGVFISDRKLVKLYRLLRTRA HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH WIFHGGAVERQDLQLLSYLGETREEIDLLEEKVPRLLGLS HHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSLPAISELTFDALSSEAHGLRERLNRFRLALGRHFVGKQTLVDLMTVAAVAQEPLLLV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE GPPGTAKSDLVLKFRDALRIPNEDYFEYLLTRFTEPSEVLGPIDINLLRQGRYIRREGGK CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHCCCHHHHCCCC LPTARLVFLDEVFKASSAILNALLTVINERKFYQDGAPQPVKLKVLFAATNELPEHAELG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHH ALKDRFCLKAACRPVQDRYFLELLDSGLDSQTHREMNQKPWAEGHATLDDVLKAHRYLTL HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH MMGKRETGPDGRELRDRDLFFRDDLLREFRRVVQTLTREDGVFISDRKLVKLYRLLRTRA HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH WIFHGGAVERQDLQLLSYLGETREEIDLLEEKVPRLLGLS HHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA