| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is celC [H]
Identifier: 108761925
GI number: 108761925
Start: 6682640
End: 6683488
Strand: Direct
Name: celC [H]
Synonym: MXAN_5368
Alternate gene names: 108761925
Gene position: 6682640-6683488 (Clockwise)
Preceding gene: 108761124
Following gene: 108763267
Centisome position: 73.12
GC content: 76.8
Gene sequence:
>849_bases ATGACGCGCCCCCTCACGCGCCTGGTGGTGAACGCGGACGACCTGGGGCTCCATGCCTCGCTGGACGCGGGCATCCTCCG CGCGCACCGCGACGGCATCGTCACCAGCGCCACGCTGCTGGCCACGGGCCCCACCGCGCCCGAGGCCGCCGCCCGCGCGA AGGAGGCACGGCTCGCGGTGGGCCTCCACCTGGCGCTCTCCACGCGGCTGCCTCCCGCGGCGCCCGCGCACGAGGTGCCC ACGGTGGCACCGGAGGGCCGGCTGCGTGGCAGCTGGGCCGACTTCGCCCGCGCCTGGCTCACCGGACAGGTTCGCCGGGA CGAGCTGGCGCGCGAGCTCTCCGCTCAGCTTCAGCGGGCCCGCGCCCTGGGCGTGACGGTGGACCACCTGGACGGGCACC AGCACCTGCACCTGCTGCCCGGGGTACGTCCCCTGGTGGAGTCCCTGGCCGCGCGCGAGGGGCTGCCCCTGCGCTGGCCG GACGCCCTGCCTCGCCCTCGCTGGCTGAAGGCGCCGGGCCCCGCGCTGAAGGCCACGGTGCTGGCCGTGCTCGCGCGCGC CGCGCCTCGGGCCCCCAAGGGCGTGCGCCGGGTGAGCGCGGGCGGCGTCTTCGAAGCGGGGATGCTGGACGAGGCCGCCC TGCTCGCGGTGGTGGACGCGCTGCCCGCGGGCGACTTCGAGCTGGGCTGTCACCCGGGTGAAGGCACGCCGCACGTCCCC GAAGACCCGGCGTGGCGCTACGGCTGGCAGGCGGAGCTGGCCGCCCTCACCAGCGCGCGCGTGAAGGCGCGGCTGCACGA GCGCGGCATCGAGCTTCACAGCTACGGAACGCTGTTCTCCGCCACGTAG
Upstream 100 bases:
>100_bases CGCGCGCCGCAGCCGCCAGTGCACCCGGTGCGCTTGCCGCCTTCCGTGCAGCAGCTCCACGCGGTGCCGCCGGGCCGCAC GGCGCGAGGCTGAGCCCCGC
Downstream 100 bases:
>100_bases AGGACGTGCGGCGTGGTGTAGCCCTGGCCCAGGTCCACCACCTCTCGCACCGCGAAGCCCGCGTCCTTCAGGTAGCGCGT CATCTCGGCTCGAGGCTTCA
Product: YdjC-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTRPLTRLVVNADDLGLHASLDAGILRAHRDGIVTSATLLATGPTAPEAAARAKEARLAVGLHLALSTRLPPAAPAHEVP TVAPEGRLRGSWADFARAWLTGQVRRDELARELSAQLQRARALGVTVDHLDGHQHLHLLPGVRPLVESLAAREGLPLRWP DALPRPRWLKAPGPALKATVLAVLARAAPRAPKGVRRVSAGGVFEAGMLDEAALLAVVDALPAGDFELGCHPGEGTPHVP EDPAWRYGWQAELAALTSARVKARLHERGIELHSYGTLFSAT
Sequences:
>Translated_282_residues MTRPLTRLVVNADDLGLHASLDAGILRAHRDGIVTSATLLATGPTAPEAAARAKEARLAVGLHLALSTRLPPAAPAHEVP TVAPEGRLRGSWADFARAWLTGQVRRDELARELSAQLQRARALGVTVDHLDGHQHLHLLPGVRPLVESLAAREGLPLRWP DALPRPRWLKAPGPALKATVLAVLARAAPRAPKGVRRVSAGGVFEAGMLDEAALLAVVDALPAGDFELGCHPGEGTPHVP EDPAWRYGWQAELAALTSARVKARLHERGIELHSYGTLFSAT >Mature_281_residues TRPLTRLVVNADDLGLHASLDAGILRAHRDGIVTSATLLATGPTAPEAAARAKEARLAVGLHLALSTRLPPAAPAHEVPT VAPEGRLRGSWADFARAWLTGQVRRDELARELSAQLQRARALGVTVDHLDGHQHLHLLPGVRPLVESLAAREGLPLRWPD ALPRPRWLKAPGPALKATVLAVLARAAPRAPKGVRRVSAGGVFEAGMLDEAALLAVVDALPAGDFELGCHPGEGTPHVPE DPAWRYGWQAELAALTSARVKARLHERGIELHSYGTLFSAT
Specific function: Unknown
COG id: COG3394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0249 family [H]
Homologues:
Organism=Homo sapiens, GI63054868, Length=306, Percent_Identity=34.9673202614379, Blast_Score=90, Evalue=3e-18, Organism=Escherichia coli, GI1788028, Length=276, Percent_Identity=30.7971014492754, Blast_Score=92, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002509 - InterPro: IPR006879 - InterPro: IPR022948 [H]
Pfam domain/function: PF04794 YdjC [H]
EC number: NA
Molecular weight: Translated: 30012; Mature: 29881
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPLTRLVVNADDLGLHASLDAGILRAHRDGIVTSATLLATGPTAPEAAARAKEARLAV CCCCHHEEEECCCCCCEECCCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHH GLHLALSTRLPPAAPAHEVPTVAPEGRLRGSWADFARAWLTGQVRRDELARELSAQLQRA EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RALGVTVDHLDGHQHLHLLPGVRPLVESLAAREGLPLRWPDALPRPRWLKAPGPALKATV HHHCCEEECCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHH LAVLARAAPRAPKGVRRVSAGGVFEAGMLDEAALLAVVDALPAGDFELGCHPGEGTPHVP HHHHHHHCCCCCHHHHHHCCCCCEECCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC EDPAWRYGWQAELAALTSARVKARLHERGIELHSYGTLFSAT CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEEECC >Mature Secondary Structure TRPLTRLVVNADDLGLHASLDAGILRAHRDGIVTSATLLATGPTAPEAAARAKEARLAV CCCHHEEEECCCCCCEECCCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHH GLHLALSTRLPPAAPAHEVPTVAPEGRLRGSWADFARAWLTGQVRRDELARELSAQLQRA EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RALGVTVDHLDGHQHLHLLPGVRPLVESLAAREGLPLRWPDALPRPRWLKAPGPALKATV HHHCCEEECCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHH LAVLARAAPRAPKGVRRVSAGGVFEAGMLDEAALLAVVDALPAGDFELGCHPGEGTPHVP HHHHHHHCCCCCHHHHHHCCCCCEECCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC EDPAWRYGWQAELAALTSARVKARLHERGIELHSYGTLFSAT CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407820 [H]