| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761751
Identifier: 108761751
GI number: 108761751
Start: 6705408
End: 6706547
Strand: Direct
Name: 108761751
Synonym: MXAN_5386
Alternate gene names: NA
Gene position: 6705408-6706547 (Clockwise)
Preceding gene: 108762341
Following gene: 108759098
Centisome position: 73.37
GC content: 65.53
Gene sequence:
>1140_bases GTGCAGGGGTGGGCGACCAACCGAACATGGAGCTGCGATAGAGAGGGGCGGAGCATGCAGGTACTCGGAAGCAAGGCGCA GGGAGCCCGGCTCGAACGCATGAAGGCGTCACCGCGCTTCAAGGACGGGATGTTCCACAACACATCCCTGGTGACTCAGG GGCTGAAGAAGGGCACCGCTGTCTCGACGATGAAGGAGTTCATCTGTGGCGGTCAGCGGCGGGTGCCGACTGGCGTGCTG CCCATCGTCAATCCGCTCGAGCAGTGGCTGCTCCCGGTGCAGGGCGGGCTCCGCGCGACGTGGCTCGGTCATTCCACCGT CCTGCTTGAGGTCGATGGGAAGCGCGTGTTGACTGACCCCGTGTGGGGAGAGCGCATCTCCCCACTTCCCTTCACGGGGC CGAAGCGGTTTCACCCCGCGCCGGTGACAATCGGTCAGCTTCCTCCGCTCCACGCGGTCGTCATCTCGCACGACCACTAC GATCACCTCGACTACCCGACCATCCTTCAACTCATCCCGCTCGGGGTTCCGTTCGTCACCTCACTCGGGGTGGGTGCGCA TCTGGAGGCGTGGGGCGTGCCTCCCGAGCGCATCACCGAGCTCGACTGGTGGGAGTCTGCGGAGGTCGGTGGCCTTACCT TCACCGCCGCACCATCACAGCACTTCTCGGGTCGCAGCGTGGCCGATAGGAACCGGACGGCGTGGTCGTCGATTGTGGTG CGCGGTCCGCATCACGCCGTCTTCTTCAGCGGCGACACGGGCCTGACCCAGGAGTACGTCGAGATCCGGCAGAGGCTGGG ACCGTTCGACCTCATCATGCTCGAGGTCGGCGCGTGGGACCCGGCGTGGGGAGATATTCACCTCGGACCGGAGAATGCGT TGCAAGCGCACGACCTGTTGGGCGGTGGCGCCTTCTTGCCGGTCCATTGGGGCACGTTCAATCTCGCAATCCATTCCTGG GACGAACCTGCGGAGACGCTCGTGAAGCTCGCCCCAACGAATGCGCCGCTGATCATGCCTCGGCTCGGGCAGCCGATCGA GCCGCTCCAGGTGCAGTCGATCGACCCATGGTGGCGCGAGGTCGATCAAACCGAGACGGAACCGGCGCCGGCGGAGGCGG TGACGGAACCCTCCGACTGA
Upstream 100 bases:
>100_bases CCTCGGGCCCAGATTCCGGCGCTTCATCATGCTCGCCAAGAGGGCGGCACTGACGGTGGGCTGGACCTTTCGTTCAGCTC AGTGATCGAATCATGGGCAG
Downstream 100 bases:
>100_bases CGAATCAGCGCGAAGCGCGCGACAGCACGACTGGCCGGTGTCGAAGGATGCGGCATCCGAACAGAGCCAGAGCGCCGCGG CCGCGGCCTCGGCCTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MQGWATNRTWSCDREGRSMQVLGSKAQGARLERMKASPRFKDGMFHNTSLVTQGLKKGTAVSTMKEFICGGQRRVPTGVL PIVNPLEQWLLPVQGGLRATWLGHSTVLLEVDGKRVLTDPVWGERISPLPFTGPKRFHPAPVTIGQLPPLHAVVISHDHY DHLDYPTILQLIPLGVPFVTSLGVGAHLEAWGVPPERITELDWWESAEVGGLTFTAAPSQHFSGRSVADRNRTAWSSIVV RGPHHAVFFSGDTGLTQEYVEIRQRLGPFDLIMLEVGAWDPAWGDIHLGPENALQAHDLLGGGAFLPVHWGTFNLAIHSW DEPAETLVKLAPTNAPLIMPRLGQPIEPLQVQSIDPWWREVDQTETEPAPAEAVTEPSD
Sequences:
>Translated_379_residues MQGWATNRTWSCDREGRSMQVLGSKAQGARLERMKASPRFKDGMFHNTSLVTQGLKKGTAVSTMKEFICGGQRRVPTGVL PIVNPLEQWLLPVQGGLRATWLGHSTVLLEVDGKRVLTDPVWGERISPLPFTGPKRFHPAPVTIGQLPPLHAVVISHDHY DHLDYPTILQLIPLGVPFVTSLGVGAHLEAWGVPPERITELDWWESAEVGGLTFTAAPSQHFSGRSVADRNRTAWSSIVV RGPHHAVFFSGDTGLTQEYVEIRQRLGPFDLIMLEVGAWDPAWGDIHLGPENALQAHDLLGGGAFLPVHWGTFNLAIHSW DEPAETLVKLAPTNAPLIMPRLGQPIEPLQVQSIDPWWREVDQTETEPAPAEAVTEPSD >Mature_379_residues MQGWATNRTWSCDREGRSMQVLGSKAQGARLERMKASPRFKDGMFHNTSLVTQGLKKGTAVSTMKEFICGGQRRVPTGVL PIVNPLEQWLLPVQGGLRATWLGHSTVLLEVDGKRVLTDPVWGERISPLPFTGPKRFHPAPVTIGQLPPLHAVVISHDHY DHLDYPTILQLIPLGVPFVTSLGVGAHLEAWGVPPERITELDWWESAEVGGLTFTAAPSQHFSGRSVADRNRTAWSSIVV RGPHHAVFFSGDTGLTQEYVEIRQRLGPFDLIMLEVGAWDPAWGDIHLGPENALQAHDLLGGGAFLPVHWGTFNLAIHSW DEPAETLVKLAPTNAPLIMPRLGQPIEPLQVQSIDPWWREVDQTETEPAPAEAVTEPSD
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To K.pneumoniae romA [H]
Homologues:
Organism=Homo sapiens, GI170932483, Length=250, Percent_Identity=42, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI170932481, Length=250, Percent_Identity=42, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17543100, Length=258, Percent_Identity=36.4341085271318, Blast_Score=171, Evalue=8e-43, Organism=Caenorhabditis elegans, GI17543102, Length=258, Percent_Identity=36.4341085271318, Blast_Score=171, Evalue=8e-43, Organism=Caenorhabditis elegans, GI25148824, Length=258, Percent_Identity=36.4341085271318, Blast_Score=170, Evalue=9e-43, Organism=Caenorhabditis elegans, GI17543104, Length=272, Percent_Identity=35.6617647058824, Blast_Score=167, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6325154, Length=244, Percent_Identity=32.3770491803279, Blast_Score=119, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41762; Mature: 41762
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGWATNRTWSCDREGRSMQVLGSKAQGARLERMKASPRFKDGMFHNTSLVTQGLKKGTA CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHH VSTMKEFICGGQRRVPTGVLPIVNPLEQWLLPVQGGLRATWLGHSTVLLEVDGKRVLTDP HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCEEEECC VWGERISPLPFTGPKRFHPAPVTIGQLPPLHAVVISHDHYDHLDYPTILQLIPLGVPFVT CCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCHHHH SLGVGAHLEAWGVPPERITELDWWESAEVGGLTFTAAPSQHFSGRSVADRNRTAWSSIVV HCCCCCEEHCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEE RGPHHAVFFSGDTGLTQEYVEIRQRLGPFDLIMLEVGAWDPAWGDIHLGPENALQAHDLL ECCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEECCHHHHHHHHHC GGGAFLPVHWGTFNLAIHSWDEPAETLVKLAPTNAPLIMPRLGQPIEPLQVQSIDPWWRE CCCEEEEEEECEEEEEEECCCCHHHHHHEECCCCCCEECCCCCCCCCCCEECCCCHHHHH VDQTETEPAPAEAVTEPSD HCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MQGWATNRTWSCDREGRSMQVLGSKAQGARLERMKASPRFKDGMFHNTSLVTQGLKKGTA CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHH VSTMKEFICGGQRRVPTGVLPIVNPLEQWLLPVQGGLRATWLGHSTVLLEVDGKRVLTDP HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCEEEECC VWGERISPLPFTGPKRFHPAPVTIGQLPPLHAVVISHDHYDHLDYPTILQLIPLGVPFVT CCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCHHHH SLGVGAHLEAWGVPPERITELDWWESAEVGGLTFTAAPSQHFSGRSVADRNRTAWSSIVV HCCCCCEEHCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEE RGPHHAVFFSGDTGLTQEYVEIRQRLGPFDLIMLEVGAWDPAWGDIHLGPENALQAHDLL ECCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEECCHHHHHHHHHC GGGAFLPVHWGTFNLAIHSWDEPAETLVKLAPTNAPLIMPRLGQPIEPLQVQSIDPWWRE CCCEEEEEEECEEEEEEECCCCHHHHHHEECCCCCCEECCCCCCCCCCCEECCCCHHHHH VDQTETEPAPAEAVTEPSD HCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]