Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is treZ [H]

Identifier: 108761737

GI number: 108761737

Start: 621391

End: 623256

Strand: Direct

Name: treZ [H]

Synonym: MXAN_0541

Alternate gene names: 108761737

Gene position: 621391-623256 (Clockwise)

Preceding gene: 108758391

Following gene: 108761859

Centisome position: 6.8

GC content: 70.42

Gene sequence:

>1866_bases
ATGCCCATGGGTCCAGCGGATGAGTCTCGGGCAGCGCGGTCGAAGGCCCCTCTCTTGGGGGCGTGGGTGGAGGCGGGTGA
GCGGGTGCGGTGGCGTGTCTGGGCGCCCGGCCACCAGCGCGTGGAGGTGGTGCTGCACGACGCGCAAGGCAATCCGGGCC
GCGTCTTGCCGATGACGCCGGAGCCCGGCGACTGCTTCGGTGCGGTGCTGGAAGGGCAGGGCGCGGGGCTTCGCTACAAG
CTGCGCGTGGATGGCGAAGGCCCCTTCCCGGACCCGTGGTCGCGTTCGCAGCCCCAGGGCGTGCATGGGCCGTCCGAAGT
GGTGGTGCCCGACTTCGCCTGGACGGACGCGGGCTGGAAGGGCGTGGCGCCGCAGGCGCTGGTCATCTACGAGGTGCACG
TGGGCACGGCCACGCCCGAAGGCACCTTCGAGTCGCTCATCCCGCGTCTGGCCGGCCTCAAGGAGCTGGGCATCACCGCG
CTGGAGCTGATGCCGGTGGCGTCCTTCCCGGGACGCCGCAACTGGGGCTACGACGGCGTGAGCCTGTTCGCGCCCCAGCA
GGCCTACGGCGGTCCGGAGGGGCTGCGCCGGTTGGTGGACGCCGCGCACGCGCACGGGCTCGCGGTGCTGATGGACGCCG
TCTACAACCACTTCGGACCGGATGGGAATTACCTGCGGGTGTATTCGCCGCACTACTTCACCGGCCGCCACCACACGCCG
TGGGGCGACGCGGTGAACTACGACGGCGAAGGCAGCGCCCACGCGCGGACCCAGGTGCTGGCCAACGTGGAGATGTGGAT
TGCTGACTACCACCTGGACGGCCTGCGCCTGGACGCCGCGCACGCCATCATCGACGACGGCACGCCGCACCTGCTCACCG
AGGTCGCCGAGCGGGCGCGGGCCTGCGCGCCGGGCCGGAAGGTGCATGTCATCGCCGAGGACGAGCGCAACGAGCGGCGC
CTGATGCGCCCCGCGTCGGAGGGCGGCCTGGGGCTGGACGGCGTGTGGGCGGATGACTTCCACCACCAACTGCGCCGCGC
CTTCGCGGGGGACAGCGACGGCTACTACCAGGACTACACGGGCAACACGGAGGACCTGGCGCGCACGCTGAACCAGGGCT
GGTTCTACGAAGGGCAGGTGTCGAAGAACCTGGGCCATGCGCGAGGCACGAAGGCGGATGGGCTGGAGCCCTGGCGCTTC
GTCCACTGCATCCAGAACCATGACCAGGTGGGCAACCGTGCCTTCGGCGAGCGGCTGGGGCACGACGTGAGCCCCGCGGC
CTTCCGCGCCATGAGTGGACTGCTGCTGCTGTCTCCCTACACGCCCATGCTCTTCATGGGGCAGGAGTGGAACGCCAGCA
CGCCCTTCCTCTACTTCACCGAGCACCACGCGGAGCTGGGCAAGCTCGTCACGGAGGGCCGGCGAAAGGAGTTCGCCGGG
TTCGCGCGCTTCGCGGGCGCGGAGGTGCCGGACCCGCAAGCGGACGACACCTTCACCCGCTCTCAACTGGACTGGGCGGA
GGCGGAGCAGCCAGGGCATGCGGGCGTGCGAGCGCTCTACCGGGAGCTGCTCCGTCTGCGCGCATCGGAGCCCGCCCTGC
GCGAGACGGGGCGGGGCTCCTATGCGGCCCGGGCCCTGGGGCCGGACGCACTGGTGCTCGAACGGCGTGGGGGCGGCCAG
CGACTGCAGGTGTTGCTCAGCCTGCGCGGCGCGCTGGATTATCCGGTGCCCGCCGGCTCGGCGCTGGTGCTGTGGACTGA
AGACGCTTGCTTCGGCGGCTCCGAAAAATTGCAGCCATTGAAGCAAGACACGGTGCGGTTGAAGGGTTCGGCTCTGGCTG
TGATAAGACTTCCCGCCAAAGACTGA

Upstream 100 bases:

>100_bases
CTTCCGGGCACCATGCCTACCCGTGAACATCCGCCGCGCGGCGGGCGCGTCCGGCCACACGGAGTGCTCCTCAAGGGCAG
GGGTGACGCATTACAGGGAC

Downstream 100 bases:

>100_bases
GAAACGCGCCGTGTTTCATTGCATGTATCGCTGCAGGGCGAGCGGGCATGGCTGAAAACATGCTCAAGAAATGTCGTGGG
AATTCCATATCGACTCAAAG

Product: malto-oligosyltrehalose trehalohydrolase

Products: NA

Alternate protein names: MTHase; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; Maltooligosyl trehalose trehalohydrolase [H]

Number of amino acids: Translated: 621; Mature: 620

Protein sequence:

>621_residues
MPMGPADESRAARSKAPLLGAWVEAGERVRWRVWAPGHQRVEVVLHDAQGNPGRVLPMTPEPGDCFGAVLEGQGAGLRYK
LRVDGEGPFPDPWSRSQPQGVHGPSEVVVPDFAWTDAGWKGVAPQALVIYEVHVGTATPEGTFESLIPRLAGLKELGITA
LELMPVASFPGRRNWGYDGVSLFAPQQAYGGPEGLRRLVDAAHAHGLAVLMDAVYNHFGPDGNYLRVYSPHYFTGRHHTP
WGDAVNYDGEGSAHARTQVLANVEMWIADYHLDGLRLDAAHAIIDDGTPHLLTEVAERARACAPGRKVHVIAEDERNERR
LMRPASEGGLGLDGVWADDFHHQLRRAFAGDSDGYYQDYTGNTEDLARTLNQGWFYEGQVSKNLGHARGTKADGLEPWRF
VHCIQNHDQVGNRAFGERLGHDVSPAAFRAMSGLLLLSPYTPMLFMGQEWNASTPFLYFTEHHAELGKLVTEGRRKEFAG
FARFAGAEVPDPQADDTFTRSQLDWAEAEQPGHAGVRALYRELLRLRASEPALRETGRGSYAARALGPDALVLERRGGGQ
RLQVLLSLRGALDYPVPAGSALVLWTEDACFGGSEKLQPLKQDTVRLKGSALAVIRLPAKD

Sequences:

>Translated_621_residues
MPMGPADESRAARSKAPLLGAWVEAGERVRWRVWAPGHQRVEVVLHDAQGNPGRVLPMTPEPGDCFGAVLEGQGAGLRYK
LRVDGEGPFPDPWSRSQPQGVHGPSEVVVPDFAWTDAGWKGVAPQALVIYEVHVGTATPEGTFESLIPRLAGLKELGITA
LELMPVASFPGRRNWGYDGVSLFAPQQAYGGPEGLRRLVDAAHAHGLAVLMDAVYNHFGPDGNYLRVYSPHYFTGRHHTP
WGDAVNYDGEGSAHARTQVLANVEMWIADYHLDGLRLDAAHAIIDDGTPHLLTEVAERARACAPGRKVHVIAEDERNERR
LMRPASEGGLGLDGVWADDFHHQLRRAFAGDSDGYYQDYTGNTEDLARTLNQGWFYEGQVSKNLGHARGTKADGLEPWRF
VHCIQNHDQVGNRAFGERLGHDVSPAAFRAMSGLLLLSPYTPMLFMGQEWNASTPFLYFTEHHAELGKLVTEGRRKEFAG
FARFAGAEVPDPQADDTFTRSQLDWAEAEQPGHAGVRALYRELLRLRASEPALRETGRGSYAARALGPDALVLERRGGGQ
RLQVLLSLRGALDYPVPAGSALVLWTEDACFGGSEKLQPLKQDTVRLKGSALAVIRLPAKD
>Mature_620_residues
PMGPADESRAARSKAPLLGAWVEAGERVRWRVWAPGHQRVEVVLHDAQGNPGRVLPMTPEPGDCFGAVLEGQGAGLRYKL
RVDGEGPFPDPWSRSQPQGVHGPSEVVVPDFAWTDAGWKGVAPQALVIYEVHVGTATPEGTFESLIPRLAGLKELGITAL
ELMPVASFPGRRNWGYDGVSLFAPQQAYGGPEGLRRLVDAAHAHGLAVLMDAVYNHFGPDGNYLRVYSPHYFTGRHHTPW
GDAVNYDGEGSAHARTQVLANVEMWIADYHLDGLRLDAAHAIIDDGTPHLLTEVAERARACAPGRKVHVIAEDERNERRL
MRPASEGGLGLDGVWADDFHHQLRRAFAGDSDGYYQDYTGNTEDLARTLNQGWFYEGQVSKNLGHARGTKADGLEPWRFV
HCIQNHDQVGNRAFGERLGHDVSPAAFRAMSGLLLLSPYTPMLFMGQEWNASTPFLYFTEHHAELGKLVTEGRRKEFAGF
ARFAGAEVPDPQADDTFTRSQLDWAEAEQPGHAGVRALYRELLRLRASEPALRETGRGSYAARALGPDALVLERRGGGQR
LQVLLSLRGALDYPVPAGSALVLWTEDACFGGSEKLQPLKQDTVRLKGSALAVIRLPAKD

Specific function: Catalyzes The Formation Of The Alpha-1,6-Glucosidic Linkages In Glycogen By Scission Of A 1,4-Alpha-Linked Oligosaccharide From Growing Alpha-1,4-Glucan Chains And The Subsequent Attachment Of The Oligosaccharide To The Alpha-1,6 Position. Has A Preferenc

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=528, Percent_Identity=24.0530303030303, Blast_Score=91, Evalue=3e-18,
Organism=Escherichia coli, GI1789839, Length=283, Percent_Identity=29.6819787985866, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI2367229, Length=342, Percent_Identity=28.6549707602339, Blast_Score=74, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17554896, Length=180, Percent_Identity=30, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI32564391, Length=180, Percent_Identity=30, Blast_Score=76, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6320826, Length=180, Percent_Identity=30.5555555555556, Blast_Score=80, Evalue=6e-16,
Organism=Drosophila melanogaster, GI28573410, Length=242, Percent_Identity=28.099173553719, Blast_Score=87, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- InterPro:   IPR022567
- InterPro:   IPR012768 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02922 CBM_48; PF11941 DUF3459 [H]

EC number: =3.2.1.141 [H]

Molecular weight: Translated: 68027; Mature: 67896

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMGPADESRAARSKAPLLGAWVEAGERVRWRVWAPGHQRVEVVLHDAQGNPGRVLPMTP
CCCCCCCHHHHHHHCCCEEHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEECCC
EPGDCFGAVLEGQGAGLRYKLRVDGEGPFPDPWSRSQPQGVHGPSEVVVPDFAWTDAGWK
CCCCHHHHEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEECCCCCC
GVAPQALVIYEVHVGTATPEGTFESLIPRLAGLKELGITALELMPVASFPGRRNWGYDGV
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCHHHHCCEEEEEEECCCCCCCCCCCCCCE
SLFAPQQAYGGPEGLRRLVDAAHAHGLAVLMDAVYNHFGPDGNYLRVYSPHYFTGRHHTP
EEECCHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCCCC
WGDAVNYDGEGSAHARTQVLANVEMWIADYHLDGLRLDAAHAIIDDGTPHLLTEVAERAR
CCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCEEEEHHHHEECCCCHHHHHHHHHHHH
ACAPGRKVHVIAEDERNERRLMRPASEGGLGLDGVWADDFHHQLRRAFAGDSDGYYQDYT
HCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCC
GNTEDLARTLNQGWFYEGQVSKNLGHARGTKADGLEPWRFVHCIQNHDQVGNRAFGERLG
CCHHHHHHHHHCCCEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHC
HDVSPAAFRAMSGLLLLSPYTPMLFMGQEWNASTPFLYFTEHHAELGKLVTEGRRKEFAG
CCCCHHHHHHHCCEEEECCCCCEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
FARFAGAEVPDPQADDTFTRSQLDWAEAEQPGHAGVRALYRELLRLRASEPALRETGRGS
HHHHCCCCCCCCCCCCCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCC
YAARALGPDALVLERRGGGQRLQVLLSLRGALDYPVPAGSALVLWTEDACFGGSEKLQPL
EEEHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHCCHH
KQDTVRLKGSALAVIRLPAKD
HHHHEEECCCEEEEEEECCCC
>Mature Secondary Structure 
PMGPADESRAARSKAPLLGAWVEAGERVRWRVWAPGHQRVEVVLHDAQGNPGRVLPMTP
CCCCCCHHHHHHHCCCEEHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEECCC
EPGDCFGAVLEGQGAGLRYKLRVDGEGPFPDPWSRSQPQGVHGPSEVVVPDFAWTDAGWK
CCCCHHHHEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEECCCCCC
GVAPQALVIYEVHVGTATPEGTFESLIPRLAGLKELGITALELMPVASFPGRRNWGYDGV
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCHHHHCCEEEEEEECCCCCCCCCCCCCCE
SLFAPQQAYGGPEGLRRLVDAAHAHGLAVLMDAVYNHFGPDGNYLRVYSPHYFTGRHHTP
EEECCHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCCCC
WGDAVNYDGEGSAHARTQVLANVEMWIADYHLDGLRLDAAHAIIDDGTPHLLTEVAERAR
CCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCEEEEHHHHEECCCCHHHHHHHHHHHH
ACAPGRKVHVIAEDERNERRLMRPASEGGLGLDGVWADDFHHQLRRAFAGDSDGYYQDYT
HCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCC
GNTEDLARTLNQGWFYEGQVSKNLGHARGTKADGLEPWRFVHCIQNHDQVGNRAFGERLG
CCHHHHHHHHHCCCEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHC
HDVSPAAFRAMSGLLLLSPYTPMLFMGQEWNASTPFLYFTEHHAELGKLVTEGRRKEFAG
CCCCHHHHHHHCCEEEECCCCCEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
FARFAGAEVPDPQADDTFTRSQLDWAEAEQPGHAGVRALYRELLRLRASEPALRETGRGS
HHHHCCCCCCCCCCCCCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCC
YAARALGPDALVLERRGGGQRLQVLLSLRGALDYPVPAGSALVLWTEDACFGGSEKLQPL
EEEHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHCCHH
KQDTVRLKGSALAVIRLPAKD
HHHHEEECCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]