| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is otsAB [H]
Identifier: 108761665
GI number: 108761665
Start: 1389169
End: 1391337
Strand: Direct
Name: otsAB [H]
Synonym: MXAN_1192
Alternate gene names: 108761665
Gene position: 1389169-1391337 (Clockwise)
Preceding gene: 108759229
Following gene: 108764094
Centisome position: 15.2
GC content: 69.29
Gene sequence:
>2169_bases ATGTCCCGACTCCTACTCGTCTCGAATCGACTTCCTGTCACCGTCAAGGTGGAGAAGGACACTGTCTCCGTGGTCCGCAG CGCGGGAGGCCTGGCCACCGGCCTTCGCCGTCCGCACGAACGCTCGGGGGGGCTGTGGATTGGCTGGCCCGGGGACGTCT CCCGCTTGTCGGAAAGCCAACGCGCCCGCGTGGACGCCCAGCTCGCGGAGCTGCGCTGCGTGCCGCTGACGCTGTCCGCC AGCGAGGTGAGCCGCTACTACGAAGGCTATTCCAACCGCGTCCTGTGGCCGCTGTGCCACTACATGCTGGAGCGCATTCC GCGCCAGGACCGCGATTGGGAGGTGTACCGCAAGGTCAACGAGCGCTTCGCGGACCTGGTGGCGAAGCACTACGAGCCCG GGGACACCATCTGGGTCCACGACTATCAGCTCATGCTGGTGCCTGGCATGTTGCGCCAGCGGTTGCCCGGCGCGCGCATC GGCTACTTCCACCACATCCCGTTTCCGTCGTCGGAAATCTTCAGCACGCTGCCGCGTCGGCGTGAGCTGCTGAAGGGGCT GCTGGGCGCGGACCTCATCGGCTTCCACACGGTGAGCTACGTGCGGCACTTCTCCGGAGCGCTGCTGCGGCACCTCGGGC TGGACACGGACATCGACCGCATCATCTGGGAGGGGCGCGACGTGCGCGTGGGCGCCTTCCCCATGGGCATCGACGCGCAG GCCTTCGAATCGATTGCGAGCGAGCCCGGCATGCAGGAGGAGGTGGCGAACTTGCGCCGGTCCTCCGAAGGACAGCGCAT CCTGTTGGGCATCGACCGGCTGGACTACACCAAGGGCATTCCGCGGCGCCTCCTGGCGGTGCAGCGCGTGCTGGAGCGCA CGCCCGCGTGGCGTGGCCGCCTGCGTTTCATCCAGGTGACGGTACCCAGCCGGACCCAGGTGGAGGCGTACGCCAACTAC CGCGAGCTGGTGAACGAGCTGGTGGGGCGCATCAATGGGCTCTACGGGACGGTGCACAACGTGCCCGTGCACTACCTCTA CCGCTCATTCAACGAACGGCAGCTCGTGGGGTTGTACCGGGGCGCGGATGTGATGCTCGTCACGCCGGTGCGGGACGGGA TGAACCTGGTGGCGAAGGAGTTCTGCGCGGCGCGTCCGGACGACGACGGCGTGCTGGTGCTCAGCGAGTTCGCGGGCGCC GCAGCGGAGCTGGGGGGCGCGCTCATCGTCAACCCCTACGACGTGGACGCCATGGCGGACGCCATCGAGAAAGCGCTGGG GATGGCGGAGGAGGAGCGCCGCACGCGCATGCACACGCTGCGCAAGCAGGTGAAGTCGCGGGACGTGCATTGGTGGACGT CCTCCTTCCTCGACCGGCTCCAGTCGCTGCCCGCGGTGGACGTGCGCGCCGAGGCGAGCGCGCCCGAGGCGCTGGCGCAG ATGAAGCAGGTGGAGCGGCTGCAACTGCTCCTGGACTACGACGGGACGCTGGTGGGCTACGCGCCCCGGCCGGAGCTGGC CGCGCCGGATGCGGCGCTGAAGGAGTTGCTGGCGAAGCTGGTGGCCCGGCCCGGCATCTCGGTGAGCATCGTCAGCGGCC GGCCCAAGGAGACGCTGGAGGAATGGTTGGGCGACCTGGCCATGGGCCTGTATGCCGAGCACGGCCTGTGGTCCCGCCCG GCGCCGGGGGAGGCGTGGAGGATGCTGGAGGGCGTGACGTTCGACTGGAAGGAGCGCGTGCGCCCCGAACTGGAGACCTT CTCCGCGCGCGTGCCGGGCTCCTTCGTGGAGGAGAAGACAGCGTCGCTGGCGTGGCACTACCGCCTGGTGGACGCGGAGT TCGGCGCCATCCAGTCCCGCGAGCTGCGGCTGTACCTGGCGGAGAAGTTCGCAGGGCAGTCCATGGACATCCTCCCCGGG GACAAGGTGGTGGAGATTCGTCCGCGGGGCGTGCACAAGGGCCGCGTGGTGGGCGAGGCCACGAAGGACGCGGCGCCCGG CGCCCTCGTGGTGGCCATCGGCGATGACCGCACGGACGAGGACCTCTTCGCATCCATTCCGCCCGGCGGGCTCACCATCC ACGCGGGCAACAAGCCCACGCGCGCGGCGTTCCGGGTGAATGGCCCGGACGAGGTCCGCGCGCTGCTGGCGGGTCTGCTG GAGCCGTAA
Upstream 100 bases:
>100_bases GGACACCGATGGCCACCCGACACGAGGGACCAACATCTGGCATGAAGCCCGTTTCGACGATGGCCATTCCTGCACGGAGT GACTAATTCAGGAGGGGCCT
Downstream 100 bases:
>100_bases CCACCTCGCGCCCGCCGGAGGTTCGGCGGGCGCGGGCCTGCTCGCGTTCGCTACGGCGTCGAGGACGCGGTGCGGTTGGC CGCGTTCTGGATGAACACCC
Product: putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB
Products: H+; alpha,alpha'-Trehalose 6-phosphate; UDP [C]
Alternate protein names: TPS; Trehalose-6-phosphate synthase [H]
Number of amino acids: Translated: 722; Mature: 721
Protein sequence:
>722_residues MSRLLLVSNRLPVTVKVEKDTVSVVRSAGGLATGLRRPHERSGGLWIGWPGDVSRLSESQRARVDAQLAELRCVPLTLSA SEVSRYYEGYSNRVLWPLCHYMLERIPRQDRDWEVYRKVNERFADLVAKHYEPGDTIWVHDYQLMLVPGMLRQRLPGARI GYFHHIPFPSSEIFSTLPRRRELLKGLLGADLIGFHTVSYVRHFSGALLRHLGLDTDIDRIIWEGRDVRVGAFPMGIDAQ AFESIASEPGMQEEVANLRRSSEGQRILLGIDRLDYTKGIPRRLLAVQRVLERTPAWRGRLRFIQVTVPSRTQVEAYANY RELVNELVGRINGLYGTVHNVPVHYLYRSFNERQLVGLYRGADVMLVTPVRDGMNLVAKEFCAARPDDDGVLVLSEFAGA AAELGGALIVNPYDVDAMADAIEKALGMAEEERRTRMHTLRKQVKSRDVHWWTSSFLDRLQSLPAVDVRAEASAPEALAQ MKQVERLQLLLDYDGTLVGYAPRPELAAPDAALKELLAKLVARPGISVSIVSGRPKETLEEWLGDLAMGLYAEHGLWSRP APGEAWRMLEGVTFDWKERVRPELETFSARVPGSFVEEKTASLAWHYRLVDAEFGAIQSRELRLYLAEKFAGQSMDILPG DKVVEIRPRGVHKGRVVGEATKDAAPGALVVAIGDDRTDEDLFASIPPGGLTIHAGNKPTRAAFRVNGPDEVRALLAGLL EP
Sequences:
>Translated_722_residues MSRLLLVSNRLPVTVKVEKDTVSVVRSAGGLATGLRRPHERSGGLWIGWPGDVSRLSESQRARVDAQLAELRCVPLTLSA SEVSRYYEGYSNRVLWPLCHYMLERIPRQDRDWEVYRKVNERFADLVAKHYEPGDTIWVHDYQLMLVPGMLRQRLPGARI GYFHHIPFPSSEIFSTLPRRRELLKGLLGADLIGFHTVSYVRHFSGALLRHLGLDTDIDRIIWEGRDVRVGAFPMGIDAQ AFESIASEPGMQEEVANLRRSSEGQRILLGIDRLDYTKGIPRRLLAVQRVLERTPAWRGRLRFIQVTVPSRTQVEAYANY RELVNELVGRINGLYGTVHNVPVHYLYRSFNERQLVGLYRGADVMLVTPVRDGMNLVAKEFCAARPDDDGVLVLSEFAGA AAELGGALIVNPYDVDAMADAIEKALGMAEEERRTRMHTLRKQVKSRDVHWWTSSFLDRLQSLPAVDVRAEASAPEALAQ MKQVERLQLLLDYDGTLVGYAPRPELAAPDAALKELLAKLVARPGISVSIVSGRPKETLEEWLGDLAMGLYAEHGLWSRP APGEAWRMLEGVTFDWKERVRPELETFSARVPGSFVEEKTASLAWHYRLVDAEFGAIQSRELRLYLAEKFAGQSMDILPG DKVVEIRPRGVHKGRVVGEATKDAAPGALVVAIGDDRTDEDLFASIPPGGLTIHAGNKPTRAAFRVNGPDEVRALLAGLL EP >Mature_721_residues SRLLLVSNRLPVTVKVEKDTVSVVRSAGGLATGLRRPHERSGGLWIGWPGDVSRLSESQRARVDAQLAELRCVPLTLSAS EVSRYYEGYSNRVLWPLCHYMLERIPRQDRDWEVYRKVNERFADLVAKHYEPGDTIWVHDYQLMLVPGMLRQRLPGARIG YFHHIPFPSSEIFSTLPRRRELLKGLLGADLIGFHTVSYVRHFSGALLRHLGLDTDIDRIIWEGRDVRVGAFPMGIDAQA FESIASEPGMQEEVANLRRSSEGQRILLGIDRLDYTKGIPRRLLAVQRVLERTPAWRGRLRFIQVTVPSRTQVEAYANYR ELVNELVGRINGLYGTVHNVPVHYLYRSFNERQLVGLYRGADVMLVTPVRDGMNLVAKEFCAARPDDDGVLVLSEFAGAA AELGGALIVNPYDVDAMADAIEKALGMAEEERRTRMHTLRKQVKSRDVHWWTSSFLDRLQSLPAVDVRAEASAPEALAQM KQVERLQLLLDYDGTLVGYAPRPELAAPDAALKELLAKLVARPGISVSIVSGRPKETLEEWLGDLAMGLYAEHGLWSRPA PGEAWRMLEGVTFDWKERVRPELETFSARVPGSFVEEKTASLAWHYRLVDAEFGAIQSRELRLYLAEKFAGQSMDILPGD KVVEIRPRGVHKGRVVGEATKDAAPGALVVAIGDDRTDEDLFASIPPGGLTIHAGNKPTRAAFRVNGPDEVRALLAGLLE P
Specific function: Catalyzes the transfer of glucose from a nucleoside diphosphate-glucose to glucose-6-phosphate to form trehalose-6- phosphate and nucleoside diphosphate [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=466, Percent_Identity=38.1974248927039, Blast_Score=304, Evalue=1e-83, Organism=Escherichia coli, GI1788207, Length=229, Percent_Identity=30.1310043668122, Blast_Score=73, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71987012, Length=421, Percent_Identity=31.5914489311164, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI115533560, Length=420, Percent_Identity=29.0476190476191, Blast_Score=160, Evalue=3e-39, Organism=Caenorhabditis elegans, GI115533558, Length=420, Percent_Identity=29.0476190476191, Blast_Score=160, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6319602, Length=465, Percent_Identity=41.7204301075269, Blast_Score=390, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6320279, Length=688, Percent_Identity=32.4127906976744, Blast_Score=355, Evalue=1e-98, Organism=Saccharomyces cerevisiae, GI6323537, Length=584, Percent_Identity=30.6506849315068, Blast_Score=271, Evalue=3e-73, Organism=Saccharomyces cerevisiae, GI6323917, Length=548, Percent_Identity=30.2919708029197, Blast_Score=263, Evalue=5e-71, Organism=Drosophila melanogaster, GI19920676, Length=762, Percent_Identity=33.4645669291339, Blast_Score=364, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: 2.4.1.15 [C]
Molecular weight: Translated: 80782; Mature: 80650
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLLLVSNRLPVTVKVEKDTVSVVRSAGGLATGLRRPHERSGGLWIGWPGDVSRLSESQ CCCEEEEECCCCEEEEECHHHHHHHHHCCCHHHHHCCCCCCCCCEEEECCCCHHHHHHHH RARVDAQLAELRCVPLTLSASEVSRYYEGYSNRVLWPLCHYMLERIPRQDRDWEVYRKVN HHHHHHHHHHEEEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH ERFADLVAKHYEPGDTIWVHDYQLMLVPGMLRQRLPGARIGYFHHIPFPSSEIFSTLPRR HHHHHHHHHHCCCCCEEEEECEEEEECCHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH RELLKGLLGADLIGFHTVSYVRHFSGALLRHLGLDTDIDRIIWEGRDVRVGAFPMGIDAQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCCCCHH AFESIASEPGMQEEVANLRRSSEGQRILLGIDRLDYTKGIPRRLLAVQRVLERTPAWRGR HHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHCCCHHHHHHHHHHHHHCCCCCCC LRFIQVTVPSRTQVEAYANYRELVNELVGRINGLYGTVHNVPVHYLYRSFNERQLVGLYR EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEC GADVMLVTPVRDGMNLVAKEFCAARPDDDGVLVLSEFAGAAAELGGALIVNPYDVDAMAD CCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEHHHCCHHHHCCCEEEECCCCHHHHHH AIEKALGMAEEERRTRMHTLRKQVKSRDVHWWTSSFLDRLQSLPAVDVRAEASAPEALAQ HHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHH MKQVERLQLLLDYDGTLVGYAPRPELAAPDAALKELLAKLVARPGISVSIVSGRPKETLE HHHHHHHHHHEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH EWLGDLAMGLYAEHGLWSRPAPGEAWRMLEGVTFDWKERVRPELETFSARVPGSFVEEKT HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHCCCHHHHHHCCCCCHHHHHHH ASLAWHYRLVDAEFGAIQSRELRLYLAEKFAGQSMDILPGDKVVEIRPRGVHKGRVVGEA HHHEEEEEEEECCCCCCCCCHHEEEEHHHHCCCCCCCCCCCCEEEECCCCCCCCCEECCC TKDAAPGALVVAIGDDRTDEDLFASIPPGGLTIHAGNKPTRAAFRVNGPDEVRALLAGLL CCCCCCCEEEEEECCCCCCCCCEEECCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHC EP CC >Mature Secondary Structure SRLLLVSNRLPVTVKVEKDTVSVVRSAGGLATGLRRPHERSGGLWIGWPGDVSRLSESQ CCEEEEECCCCEEEEECHHHHHHHHHCCCHHHHHCCCCCCCCCEEEECCCCHHHHHHHH RARVDAQLAELRCVPLTLSASEVSRYYEGYSNRVLWPLCHYMLERIPRQDRDWEVYRKVN HHHHHHHHHHEEEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH ERFADLVAKHYEPGDTIWVHDYQLMLVPGMLRQRLPGARIGYFHHIPFPSSEIFSTLPRR HHHHHHHHHHCCCCCEEEEECEEEEECCHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH RELLKGLLGADLIGFHTVSYVRHFSGALLRHLGLDTDIDRIIWEGRDVRVGAFPMGIDAQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCCCCHH AFESIASEPGMQEEVANLRRSSEGQRILLGIDRLDYTKGIPRRLLAVQRVLERTPAWRGR HHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHCCCHHHHHHHHHHHHHCCCCCCC LRFIQVTVPSRTQVEAYANYRELVNELVGRINGLYGTVHNVPVHYLYRSFNERQLVGLYR EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEC GADVMLVTPVRDGMNLVAKEFCAARPDDDGVLVLSEFAGAAAELGGALIVNPYDVDAMAD CCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEHHHCCHHHHCCCEEEECCCCHHHHHH AIEKALGMAEEERRTRMHTLRKQVKSRDVHWWTSSFLDRLQSLPAVDVRAEASAPEALAQ HHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHH MKQVERLQLLLDYDGTLVGYAPRPELAAPDAALKELLAKLVARPGISVSIVSGRPKETLE HHHHHHHHHHEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH EWLGDLAMGLYAEHGLWSRPAPGEAWRMLEGVTFDWKERVRPELETFSARVPGSFVEEKT HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHCCCHHHHHHCCCCCHHHHHHH ASLAWHYRLVDAEFGAIQSRELRLYLAEKFAGQSMDILPGDKVVEIRPRGVHKGRVVGEA HHHEEEEEEEECCCCCCCCCHHEEEEHHHHCCCCCCCCCCCCEEEECCCCCCCCCEECCC TKDAAPGALVVAIGDDRTDEDLFASIPPGGLTIHAGNKPTRAAFRVNGPDEVRALLAGLL CCCCCCCEEEEEECCCCCCCCCEEECCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHC EP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Monovalent cations [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-Glucose 6-phosphate; UDPglucose [C]
Specific reaction: D-Glucose 6-phosphate + UDPglucose --> H+ + alpha,alpha'-Trehalose 6-phosphate + UDP [C]
General reaction: Hexosyl group transfer [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA