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The map label for this gene is ybdE [C]

Identifier: 108761663

GI number: 108761663

Start: 2099654

End: 2100331

Strand: Reverse

Name: ybdE [C]

Synonym: MXAN_1772

Alternate gene names: 108761663

Gene position: 2100331-2099654 (Counterclockwise)

Preceding gene: 108760642

Following gene: 108756789

Centisome position: 22.98

GC content: 62.83

Gene sequence:

>678_bases
ATGGGAGCATCCAAGCGCATCCGCCCCAAACTGATGACCGTGGCGGCGAACAGGACTGGCCGCTTGCCAGCGCTCATGGG
CCACAGGCGCACGGGCTCCGACGTGATGAAGCGTATCGCGGCGCTGATGGTGGGCGGGCCTGCAACGTCTTTCCTACTTG
GAGAGAAAGCGAACAGCCATGCCCCGACAGCCTCCGCTTCATGGCGGGAGGGGCTGCAGGCCATTTCCCGACCCCGGCAT
AAGCTTTCTTATCTTACAGGCGAACAATGCCAATTTCCGGGAGGAATTAGCATGAGGAAGCTTGGATATGGACTACTCGT
CACCACGGGGCTGCTTATCGGCACACTTGCTGAAGCCCAAGGGGCTTCCCAACCACCGTCCGCGGGACGCCAGGCGGATG
ACTCGACACGGCAACAGCCAGGCTGCGCCTGTGGGATGACGGGCAGCGGTATGATGGCCCATGGAATGGGCGGCGCGGGA
ATGAACTGCCCCATGCGAGGAATGGCGGACGTGCAGGTGGAGCAGACGCAAGAAGGGGCCACTCTGCACCTCACCGCAAA
GAACCCCAGTCAAGTCGAGGACGTCCAGCGCATGGCAGAAGGGATGCAGCGCTGCATGAGTGGAAGCGGCGCCCCGCAGC
AGGGCCAACCGGCATCGCCCCGTCATCAACAACGCTGA

Upstream 100 bases:

>100_bases
GGACGAAGAGACGGGGGGATGCTGCTCTATCTCACCCTCGCCCATCGCAGGGTGATGGAGGGCTGCATTTCAAGGGGGAA
GCTGTCGGAAGCCATTATCG

Downstream 100 bases:

>100_bases
GTACGGCGCGTCGTTCCCCGGTGTGCCTACCCAAAATTCGGTCGCCGCGTCATGGGCGCGTCAAAGTCCCGCTCAGCAGT
GCGTCAATGCGCGAGAGCGA

Product: hypothetical protein

Products: Proton [Cytoplasm]; silver [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MGASKRIRPKLMTVAANRTGRLPALMGHRRTGSDVMKRIAALMVGGPATSFLLGEKANSHAPTASASWREGLQAISRPRH
KLSYLTGEQCQFPGGISMRKLGYGLLVTTGLLIGTLAEAQGASQPPSAGRQADDSTRQQPGCACGMTGSGMMAHGMGGAG
MNCPMRGMADVQVEQTQEGATLHLTAKNPSQVEDVQRMAEGMQRCMSGSGAPQQGQPASPRHQQR

Sequences:

>Translated_225_residues
MGASKRIRPKLMTVAANRTGRLPALMGHRRTGSDVMKRIAALMVGGPATSFLLGEKANSHAPTASASWREGLQAISRPRH
KLSYLTGEQCQFPGGISMRKLGYGLLVTTGLLIGTLAEAQGASQPPSAGRQADDSTRQQPGCACGMTGSGMMAHGMGGAG
MNCPMRGMADVQVEQTQEGATLHLTAKNPSQVEDVQRMAEGMQRCMSGSGAPQQGQPASPRHQQR
>Mature_224_residues
GASKRIRPKLMTVAANRTGRLPALMGHRRTGSDVMKRIAALMVGGPATSFLLGEKANSHAPTASASWREGLQAISRPRHK
LSYLTGEQCQFPGGISMRKLGYGLLVTTGLLIGTLAEAQGASQPPSAGRQADDSTRQQPGCACGMTGSGMMAHGMGGAGM
NCPMRGMADVQVEQTQEGATLHLTAKNPSQVEDVQRMAEGMQRCMSGSGAPQQGQPASPRHQQR

Specific function: Could Be A Drug Efflux Pump. [C]

COG id: COG3696

COG function: function code P; Putative silver efflux pump

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23626; Mature: 23494

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGASKRIRPKLMTVAANRTGRLPALMGHRRTGSDVMKRIAALMVGGPATSFLLGEKANSH
CCCCCCCCHHHEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCC
APTASASWREGLQAISRPRHKLSYLTGEQCQFPGGISMRKLGYGLLVTTGLLIGTLAEAQ
CCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GASQPPSAGRQADDSTRQQPGCACGMTGSGMMAHGMGGAGMNCPMRGMADVQVEQTQEGA
CCCCCCCCCCCCCCCHHCCCCCEECCCCCCCEECCCCCCCCCCCCCCCCCCCHHHCCCCC
TLHLTAKNPSQVEDVQRMAEGMQRCMSGSGAPQQGQPASPRHQQR
EEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GASKRIRPKLMTVAANRTGRLPALMGHRRTGSDVMKRIAALMVGGPATSFLLGEKANSH
CCCCCCCHHHEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCC
APTASASWREGLQAISRPRHKLSYLTGEQCQFPGGISMRKLGYGLLVTTGLLIGTLAEAQ
CCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GASQPPSAGRQADDSTRQQPGCACGMTGSGMMAHGMGGAGMNCPMRGMADVQVEQTQEGA
CCCCCCCCCCCCCCCHHCCCCCEECCCCCCCEECCCCCCCCCCCCCCCCCCCHHHCCCCC
TLHLTAKNPSQVEDVQRMAEGMQRCMSGSGAPQQGQPASPRHQQR
EEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; silver [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + silver [Cytoplasm] = Proton [Cytoplasm] + silver [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA