| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is prs [H]
Identifier: 108761645
GI number: 108761645
Start: 6349494
End: 6350444
Strand: Direct
Name: prs [H]
Synonym: MXAN_5075
Alternate gene names: 108761645
Gene position: 6349494-6350444 (Clockwise)
Preceding gene: 108757875
Following gene: 108763637
Centisome position: 69.47
GC content: 68.24
Gene sequence:
>951_bases ATGCAGCCGCGTGACTTCAAGGTGTTCGCCGGGAACTCGAATCCCGGCCTGGCGCATCGCATCTGCGAGTACCTCAAGCG CCCTCTGGGCAAGGCGGAGGTCGGTCGGTTCTCGGACGGGGAGATTCACGTCGAGATCGGCGAGAACGTCCGCGGCCACG ACGTCTTCATCCTCCAGTCGACCTGCCCGCCTGCGAACGATCACCTGATGGAGTTGCTCATCATGTGTGACGCGCTCAAG CGGGCGAGCGCCGGCTCCATCACCGCCGTCATTCCGTACTACGGGTACGCCCGTCAGGACCGGAAGGTGGCGCCGCGTAC GCCCATCACCGCGAAGCTCATCGCGGACCTGCTGGAGTCCGCGGGCGCCGGGCGCGTGGTGTCCATGGACATGCACGCGG GGCAGATCCAGGGCTTCTTCAACATCCCCTCGGACCACCTCTACGGCTCGCCGGTGTTCCTGGAAGACCTGCGCAAGCGC TTCCCGGAGTCGCAGGAGCTGGTCATCGTCTCGCCGGACGCCGGCGGTGTGGAGCGCGCCCGCGCGTACTCCAAGCGGCT GAACACGGGCCTGGCCATCATCGACAAGCGCCGTCCCCGCCCCAACGCGTCGGAGGTGATGAACCTCATCGGCGACGTGA GCGGCAAGGACGCGGTGCTGGTGGACGACATGGTGGACACCGCCGGCACGCTCGCCCAGGCGGCCGCGGCGCTGAAGGCC AAGGGCGCACGGCGCGTGGTGGCATACGCGGTCCACCCCATCCTCTCCGGCCCGGCCATCCAGCGCATCCAGGACTCGGT GCTGGAAGAGGTCGTCTTCACGGACACCGTGCCGCTGTCCCCGGCGGCGCAGGCCTGCTCGAAGATCCGCCTGCTCACCA CCGAGCGCCTCTTCGGCGAGGCCATTGCCCGCATCCACCGCGCAGACTCGCTCAGCTCGCTGTTCGTCTGA
Upstream 100 bases:
>100_bases TCCATCAGGCGCAAGCCGGGATGCTCGTCGCAGCGCCAGCGGACCTCGACTAACGACTTCTTTCCTTCTGTCCGCGTCCA GGTTAGTCAGCGGCCCCACC
Downstream 100 bases:
>100_bases GCCGGCGCGCGCTTGCCCGCCGGGCGGCTTGACTCCAGGCCCTCCGGCTGGCATGTGCACGACCCTCCATCGGAGGCCTT CACAGGCGCCGTCTTCGGGG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MQPRDFKVFAGNSNPGLAHRICEYLKRPLGKAEVGRFSDGEIHVEIGENVRGHDVFILQSTCPPANDHLMELLIMCDALK RASAGSITAVIPYYGYARQDRKVAPRTPITAKLIADLLESAGAGRVVSMDMHAGQIQGFFNIPSDHLYGSPVFLEDLRKR FPESQELVIVSPDAGGVERARAYSKRLNTGLAIIDKRRPRPNASEVMNLIGDVSGKDAVLVDDMVDTAGTLAQAAAALKA KGARRVVAYAVHPILSGPAIQRIQDSVLEEVVFTDTVPLSPAAQACSKIRLLTTERLFGEAIARIHRADSLSSLFV
Sequences:
>Translated_316_residues MQPRDFKVFAGNSNPGLAHRICEYLKRPLGKAEVGRFSDGEIHVEIGENVRGHDVFILQSTCPPANDHLMELLIMCDALK RASAGSITAVIPYYGYARQDRKVAPRTPITAKLIADLLESAGAGRVVSMDMHAGQIQGFFNIPSDHLYGSPVFLEDLRKR FPESQELVIVSPDAGGVERARAYSKRLNTGLAIIDKRRPRPNASEVMNLIGDVSGKDAVLVDDMVDTAGTLAQAAAALKA KGARRVVAYAVHPILSGPAIQRIQDSVLEEVVFTDTVPLSPAAQACSKIRLLTTERLFGEAIARIHRADSLSSLFV >Mature_316_residues MQPRDFKVFAGNSNPGLAHRICEYLKRPLGKAEVGRFSDGEIHVEIGENVRGHDVFILQSTCPPANDHLMELLIMCDALK RASAGSITAVIPYYGYARQDRKVAPRTPITAKLIADLLESAGAGRVVSMDMHAGQIQGFFNIPSDHLYGSPVFLEDLRKR FPESQELVIVSPDAGGVERARAYSKRLNTGLAIIDKRRPRPNASEVMNLIGDVSGKDAVLVDDMVDTAGTLAQAAAALKA KGARRVVAYAVHPILSGPAIQRIQDSVLEEVVFTDTVPLSPAAQACSKIRLLTTERLFGEAIARIHRADSLSSLFV
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=311, Percent_Identity=48.2315112540193, Blast_Score=303, Evalue=2e-82, Organism=Homo sapiens, GI28557709, Length=311, Percent_Identity=47.588424437299, Blast_Score=298, Evalue=3e-81, Organism=Homo sapiens, GI4506129, Length=308, Percent_Identity=47.4025974025974, Blast_Score=298, Evalue=3e-81, Organism=Homo sapiens, GI84875539, Length=311, Percent_Identity=46.9453376205788, Blast_Score=293, Evalue=1e-79, Organism=Homo sapiens, GI194018537, Length=343, Percent_Identity=37.0262390670554, Blast_Score=202, Evalue=2e-52, Organism=Homo sapiens, GI4506133, Length=342, Percent_Identity=35.672514619883, Blast_Score=198, Evalue=7e-51, Organism=Homo sapiens, GI310128524, Length=147, Percent_Identity=31.9727891156463, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI310115209, Length=147, Percent_Identity=31.9727891156463, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI310118259, Length=147, Percent_Identity=31.9727891156463, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI310119946, Length=147, Percent_Identity=31.9727891156463, Blast_Score=83, Evalue=4e-16, Organism=Escherichia coli, GI1787458, Length=313, Percent_Identity=58.14696485623, Blast_Score=372, Evalue=1e-104, Organism=Caenorhabditis elegans, GI25149168, Length=311, Percent_Identity=49.1961414790997, Blast_Score=310, Evalue=5e-85, Organism=Caenorhabditis elegans, GI17554702, Length=311, Percent_Identity=49.1961414790997, Blast_Score=309, Evalue=1e-84, Organism=Caenorhabditis elegans, GI17554704, Length=308, Percent_Identity=49.3506493506493, Blast_Score=308, Evalue=3e-84, Organism=Caenorhabditis elegans, GI71989924, Length=311, Percent_Identity=49.1961414790997, Blast_Score=307, Evalue=5e-84, Organism=Caenorhabditis elegans, GI17570245, Length=335, Percent_Identity=34.6268656716418, Blast_Score=207, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6319403, Length=317, Percent_Identity=45.1104100946372, Blast_Score=265, Evalue=7e-72, Organism=Saccharomyces cerevisiae, GI6320946, Length=317, Percent_Identity=45.1104100946372, Blast_Score=264, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6321776, Length=316, Percent_Identity=43.0379746835443, Blast_Score=255, Evalue=6e-69, Organism=Saccharomyces cerevisiae, GI6322667, Length=208, Percent_Identity=40.8653846153846, Blast_Score=162, Evalue=7e-41, Organism=Saccharomyces cerevisiae, GI6324511, Length=112, Percent_Identity=45.5357142857143, Blast_Score=99, Evalue=6e-22, Organism=Drosophila melanogaster, GI21355239, Length=311, Percent_Identity=48.8745980707396, Blast_Score=300, Evalue=1e-81, Organism=Drosophila melanogaster, GI45551540, Length=334, Percent_Identity=45.5089820359281, Blast_Score=287, Evalue=5e-78, Organism=Drosophila melanogaster, GI24651458, Length=354, Percent_Identity=33.8983050847458, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24651456, Length=354, Percent_Identity=33.8983050847458, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI281362873, Length=354, Percent_Identity=33.8983050847458, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24651454, Length=354, Percent_Identity=33.8983050847458, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24651462, Length=373, Percent_Identity=32.7077747989276, Blast_Score=198, Evalue=4e-51, Organism=Drosophila melanogaster, GI24651464, Length=373, Percent_Identity=32.7077747989276, Blast_Score=198, Evalue=4e-51, Organism=Drosophila melanogaster, GI45552010, Length=373, Percent_Identity=32.7077747989276, Blast_Score=197, Evalue=6e-51,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34278; Mature: 34278
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPRDFKVFAGNSNPGLAHRICEYLKRPLGKAEVGRFSDGEIHVEIGENVRGHDVFILQS CCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHCCCCCCCEEEEEECCCCCCCEEEEEEC TCPPANDHLMELLIMCDALKRASAGSITAVIPYYGYARQDRKVAPRTPITAKLIADLLES CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHC AGAGRVVSMDMHAGQIQGFFNIPSDHLYGSPVFLEDLRKRFPESQELVIVSPDAGGVERA CCCCCEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHH RAYSKRLNTGLAIIDKRRPRPNASEVMNLIGDVSGKDAVLVDDMVDTAGTLAQAAAALKA HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH KGARRVVAYAVHPILSGPAIQRIQDSVLEEVVFTDTVPLSPAAQACSKIRLLTTERLFGE CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH AIARIHRADSLSSLFV HHHHHHHHHHHHHHCC >Mature Secondary Structure MQPRDFKVFAGNSNPGLAHRICEYLKRPLGKAEVGRFSDGEIHVEIGENVRGHDVFILQS CCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHCCCCCCCEEEEEECCCCCCCEEEEEEC TCPPANDHLMELLIMCDALKRASAGSITAVIPYYGYARQDRKVAPRTPITAKLIADLLES CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHC AGAGRVVSMDMHAGQIQGFFNIPSDHLYGSPVFLEDLRKRFPESQELVIVSPDAGGVERA CCCCCEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHH RAYSKRLNTGLAIIDKRRPRPNASEVMNLIGDVSGKDAVLVDDMVDTAGTLAQAAAALKA HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH KGARRVVAYAVHPILSGPAIQRIQDSVLEEVVFTDTVPLSPAAQACSKIRLLTTERLFGE CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH AIARIHRADSLSSLFV HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA