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The map label for this gene is ybbK [C]

Identifier: 108761641

GI number: 108761641

Start: 483850

End: 484974

Strand: Reverse

Name: ybbK [C]

Synonym: MXAN_0423

Alternate gene names: 108761641

Gene position: 484974-483850 (Counterclockwise)

Preceding gene: 108762080

Following gene: 108763214

Centisome position: 5.31

GC content: 69.51

Gene sequence:

>1125_bases
ATGAGCATCATGCGTGTGGATATCGGGCAGAATGAGCGGGCGTTCGTGCTGGTGGACGAGAAGCCGGAGCGCTACCTCGT
TCCCGGCCGGTACTGGCTGCTCCACCCCTTCCGAAAGGTGCGGCTGGTGCGCGTGAGCACCGAGCAGCCGCTCGTCCAGC
TCGACCCGGCGTTCCTGCCCCTCGTGCCGGAGACGGACCTGCAGGTCGTGGAGCTGAGTGCCGACGAGCGCGCCATCCTC
TTCCACAAGGGCCGCCCCGTGCGGTGGCTCGGCCGGGGCCTGCACCAGGTGTGGACGGTGGAGCGCCTTCCCAGCCGTCA
GCTGACGCCCGGCGCGCCCACCGTGCGCGTGGAGCGCGTGGACACCTCGGGTGTCACCACGGCGCCGCTGCGTGACGACG
TGCGTGCCCTGGTCCCCACCAGCGACTACACAGAGGCCACCGCCACTGAGGGCACCGTCGTGCTCCGCTACGTGGATGGC
GTGCTGGACGCCGAACTTCCTCCGGGCCGTCACGCCGCGTGGACCGTCGCCCGCAAGGTGCAGCTGGCCGTCATCGACCT
GCGTGAGCGCCTGCTCCACGTCACCGGCCAGGAGGTGATGACGAAGGACCGCGTCACGCTGCGCCTCAACCTGTCAGCGG
CCTTCCGCGTCTCGGACGCGCGCCGGCTCGCCGTCGTGTCCCGCGCTCCGGATGACGTCCTCTACCTGGCCATGCAACTG
GCCGCGCGCGAGGCCGTGTCGGAGCGGACGCTGGATGAGCTGCTCGCCTCGCGAGAAGCCGTGGCCGAAAGCCTCTTCAC
CCAGGTGAAGGACCGCGCCCACACGGTGGGCCTGGACCTGCTGCGCTTCGGCATCAAGGACGTCGTCCTCCCGGGTGAGA
TGAAGGAGCTGCTCAACCGCGTCATCCAGGCGCAGAAGGAAGCGGAGGCCAACGTCATCCTGCGACGCGAGGAGACGGCC
GCCACCCGCTCCATGGCGCAGACGGCCAAGGTGCTGGCGGAGAACCCGCTGCTGGTGCGCCTCAAGGAACTGGAAGCCTA
CAAGGACCTCGCGTCCAAGGTGGGGCAGGTGCACCTCGTCCTCGGCGAGGGCGCGGTGCCCACCCTGCAACTCAAGAGTC
ACTGA

Upstream 100 bases:

>100_bases
TGGGGCCCTCACTTTTCAGCAGTACCCGGGACACACGCGGCAACGCGCACTGAAACGTCCCGGTTCTTCAAGCTCCCCGG
AGGGGGAAAGGAGGTGCGCG

Downstream 100 bases:

>100_bases
CTCGCAAATCAATCTCGGGTTACCCTCGCGGCCCCACACCCGCGAGGAGCCCGAGATGTCGTCTTCGAACCACTACGTCC
CCAACCTGCGCGATATCGAA

Product: SPFH domain-containing protein/band 7 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MSIMRVDIGQNERAFVLVDEKPERYLVPGRYWLLHPFRKVRLVRVSTEQPLVQLDPAFLPLVPETDLQVVELSADERAIL
FHKGRPVRWLGRGLHQVWTVERLPSRQLTPGAPTVRVERVDTSGVTTAPLRDDVRALVPTSDYTEATATEGTVVLRYVDG
VLDAELPPGRHAAWTVARKVQLAVIDLRERLLHVTGQEVMTKDRVTLRLNLSAAFRVSDARRLAVVSRAPDDVLYLAMQL
AAREAVSERTLDELLASREAVAESLFTQVKDRAHTVGLDLLRFGIKDVVLPGEMKELLNRVIQAQKEAEANVILRREETA
ATRSMAQTAKVLAENPLLVRLKELEAYKDLASKVGQVHLVLGEGAVPTLQLKSH

Sequences:

>Translated_374_residues
MSIMRVDIGQNERAFVLVDEKPERYLVPGRYWLLHPFRKVRLVRVSTEQPLVQLDPAFLPLVPETDLQVVELSADERAIL
FHKGRPVRWLGRGLHQVWTVERLPSRQLTPGAPTVRVERVDTSGVTTAPLRDDVRALVPTSDYTEATATEGTVVLRYVDG
VLDAELPPGRHAAWTVARKVQLAVIDLRERLLHVTGQEVMTKDRVTLRLNLSAAFRVSDARRLAVVSRAPDDVLYLAMQL
AAREAVSERTLDELLASREAVAESLFTQVKDRAHTVGLDLLRFGIKDVVLPGEMKELLNRVIQAQKEAEANVILRREETA
ATRSMAQTAKVLAENPLLVRLKELEAYKDLASKVGQVHLVLGEGAVPTLQLKSH
>Mature_373_residues
SIMRVDIGQNERAFVLVDEKPERYLVPGRYWLLHPFRKVRLVRVSTEQPLVQLDPAFLPLVPETDLQVVELSADERAILF
HKGRPVRWLGRGLHQVWTVERLPSRQLTPGAPTVRVERVDTSGVTTAPLRDDVRALVPTSDYTEATATEGTVVLRYVDGV
LDAELPPGRHAAWTVARKVQLAVIDLRERLLHVTGQEVMTKDRVTLRLNLSAAFRVSDARRLAVVSRAPDDVLYLAMQLA
AREAVSERTLDELLASREAVAESLFTQVKDRAHTVGLDLLRFGIKDVVLPGEMKELLNRVIQAQKEAEANVILRREETAA
TRSMAQTAKVLAENPLLVRLKELEAYKDLASKVGQVHLVLGEGAVPTLQLKSH

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI21686995, Length=171, Percent_Identity=28.6549707602339, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI221316744, Length=171, Percent_Identity=28.6549707602339, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193210507, Length=172, Percent_Identity=31.9767441860465, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17570161, Length=172, Percent_Identity=31.9767441860465, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI32566490, Length=181, Percent_Identity=31.4917127071823, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71987621, Length=170, Percent_Identity=30, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25153583, Length=170, Percent_Identity=30, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17569499, Length=169, Percent_Identity=28.9940828402367, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71987612, Length=170, Percent_Identity=30, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21356845, Length=172, Percent_Identity=25, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281365664, Length=172, Percent_Identity=30.2325581395349, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24657857, Length=172, Percent_Identity=30.2325581395349, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI281361631, Length=169, Percent_Identity=25.4437869822485, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI281361633, Length=179, Percent_Identity=25.6983240223464, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI62484448, Length=172, Percent_Identity=30.2325581395349, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI62484274, Length=172, Percent_Identity=30.2325581395349, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 41837; Mature: 41706

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIMRVDIGQNERAFVLVDEKPERYLVPGRYWLLHPFRKVRLVRVSTEQPLVQLDPAFLP
CCEEEEECCCCCCEEEEEECCCCEEECCCCEEEECCCCEEEEEEEECCCCEEEECCCEEC
LVPETDLQVVELSADERAILFHKGRPVRWLGRGLHQVWTVERLPSRQLTPGAPTVRVERV
CCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
DTSGVTTAPLRDDVRALVPTSDYTEATATEGTVVLRYVDGVLDAELPPGRHAAWTVARKV
CCCCCEECCCHHCHHEECCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCHHHHHHHHH
QLAVIDLRERLLHVTGQEVMTKDRVTLRLNLSAAFRVSDARRLAVVSRAPDDVLYLAMQL
HHHHHHHHHHHHHHCCHHHHCCCCEEEEEECEEEEEECCCCEEEEEECCCHHHHHHHHHH
AAREAVSERTLDELLASREAVAESLFTQVKDRAHTVGLDLLRFGIKDVVLPGEMKELLNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCHHHHHHHHH
VIQAQKEAEANVILRREETAATRSMAQTAKVLAENPLLVRLKELEAYKDLASKVGQVHLV
HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCEEEEE
LGEGAVPTLQLKSH
EECCCCCEEEECCC
>Mature Secondary Structure 
SIMRVDIGQNERAFVLVDEKPERYLVPGRYWLLHPFRKVRLVRVSTEQPLVQLDPAFLP
CEEEEECCCCCCEEEEEECCCCEEECCCCEEEECCCCEEEEEEEECCCCEEEECCCEEC
LVPETDLQVVELSADERAILFHKGRPVRWLGRGLHQVWTVERLPSRQLTPGAPTVRVERV
CCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
DTSGVTTAPLRDDVRALVPTSDYTEATATEGTVVLRYVDGVLDAELPPGRHAAWTVARKV
CCCCCEECCCHHCHHEECCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCHHHHHHHHH
QLAVIDLRERLLHVTGQEVMTKDRVTLRLNLSAAFRVSDARRLAVVSRAPDDVLYLAMQL
HHHHHHHHHHHHHHCCHHHHCCCCEEEEEECEEEEEECCCCEEEEEECCCHHHHHHHHHH
AAREAVSERTLDELLASREAVAESLFTQVKDRAHTVGLDLLRFGIKDVVLPGEMKELLNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCHHHHHHHHH
VIQAQKEAEANVILRREETAATRSMAQTAKVLAENPLLVRLKELEAYKDLASKVGQVHLV
HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCEEEEE
LGEGAVPTLQLKSH
EECCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]