| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ycdQ [C]
Identifier: 108761614
GI number: 108761614
Start: 5796811
End: 5799153
Strand: Reverse
Name: ycdQ [C]
Synonym: MXAN_4619
Alternate gene names: 108761614
Gene position: 5799153-5796811 (Counterclockwise)
Preceding gene: 108760677
Following gene: 108762403
Centisome position: 63.45
GC content: 67.14
Gene sequence:
>2343_bases ATGAGCATGACCCGCGTCTGCCTCGTTACCGATGAGCTCTACCCCTTCACCCCCGGGGGCATTGGCCGCGTCGCGCACAA CCTCATCATGGACTCGCAGCGCCACGGCGCGAACGTGGAGTTCCATGTCCTGTTCCCGCCCACCGTTTCCGTGCAGACGG CCCAGGTGGAGCTCTTCTTCGGGGGACGGGTGAAGGCGCATCTGTGCGACTTCCGCGAGCCACAACAGACCACCGCGGAT GCGCATGGCTTCTATCCGCCCACGGAAGCCTTTCGGGATTCTCGTTGGCACGGTGAGTCGTTGGAGGTGATGCGTTACCT GAAGGCGCGCGAAGCGGAGGGCTTGCGCTTCGACGTCATCGAGTTCGCGGATTTCCGCGGCTGGGCCTTCGCCGCGCTGC AGGAGAAGCACCTGGGGCTGGCCTTCGCGCAGACCACCCTCTCGGTGCGGCTGCACTCGAGCTACGGCACCCTCATGCAC CACGAGCCCAACACGCTCGAGGTCGAGAACCTGGGGCGGTACGAAATCGAGCGGAAGTCCTTGCTCGATGCGGACCTCGT GGTGGGGCACCTGCCATGCATCGCCGAGTTCAACCGGCGTTTCTACGGCTTCGATGACGCGTGGATGCGCAAGGTGCGGG TGGAGTTTCCCCCGGTGGTCATGGAGTCTCCGGCGGAGTCGTCCCGGCCGTTCGACGTTCCCGCGACCCAGCGCAACCTG GTGTTCGTCACCAAGATCCAGCACTTCAAGCAGCCGGATGTCTTCGTCCGGGGTGCCGTGCTGTTGATGCGTACGTGGCC GGAGTACCAGGGCAAGGCCATCCTGGCGTGCCATGCCTTCGACCCGGAATTCCTCGCAGAGGTCAAGGCGCTCATCCCGT CGGACCTGACGGACCGCTTCGTCTTCATCAAGCCAGGTCCTGACCGCGAAGCGCACATGCGCGCGGGGGTGGTGGTCATC ACCTCCAGCTATGAGTCGCTGAATCTCACGGCCTACGAGGCTTCCGTCGCGGGCACCCGGCTGGTGCTCAACTCGGCCTG CCTGGCCTTCGGTGACGACAGCCCCTTCGTCGACGGGGTCCACTGCCACAAGTATGACGGCAGCCTGGACGCGCTGGTGG TGGCCATGCGCAAGGCGTTGGAAGGCCCGGAGCTGGCCCCCGTCCGCTGGACGGTGGACCGTCCCTATTGGGAGCGCCAC GCGCGGGAGGCGCTGCCCACGCGAAGCCCTCGGTCGCCGCTGGTCAGCGTGGTCATCATCAATCAGGACCAGGGCATCTT CCTGCCCATCGCGCTGCAAGGTGTCGCCGCCAGCACGTACCCGGAAGTGGAAGTCGTCATCGTGGACGATGGGTCCACGA GCGCCTTCGACATGCAGGTCCTGCAGCGCCTGGAGCGGTCCGCGGCTGAAGGGGAGGGGCTTCGTGTCGTCCGCTCCCCG ATCCGCCGCGGGTTCGCGGGGGCTCGTAACCTGGGTGTCCGCGCCGCACGCGGGGAATACGTCGTGTTCCTGGAGTCGGA CGACAGCCTGTCCCCGGACTTCATCCAGCACGCCGTCGCCGCGCTGGAAGCGCGACAGGAGTTCTCAGGGGTGGTCCCCA CCGGAGGCCGCTTCCACTCCAGCGAAGAGCTGGCCAACCGCCAGTTCAAAGGGTTCATGACGTACCTGGGGGATTGTCCG ACGTACGCGCTGGCCGCGAACCAGGTCTCCGCGCCCACGGCGCTGCTGCGCCGAACCGTCCTGGAGCAGCACGCCTACAA CGAAACCCTGTCCGGCTATGCGGACTGGGATTTCTTCCTGCGGCTCGCGCAGGGGGGACACCGCTTCCTGGTGACGAACC AGGTCCACTTCTTCTCGCGGCGGGGGCATGCCATCACCCCGTCCGCGTCCCAGCAGCGCCAGCACTTCCGCTGGCTGGTG CGGCTCTTCGAAGGCGTGCCCGCGCCACTGCACCCGTCGACGCGGCTCTTCGCACTGCTCGCGCACTCCCGCGAGGCCAT GGTCGACCCATATGGCGCGCTAGACACGCATGAGCGTCGGCCGTCCTCCGCGGCGTCCGCGTCCCTGGAGTCCGCCCAGG CGCTGGCCGAGGCCGCGCGCCCGCTGCGCTACGACGTGGTGGATTTGATGAACGCGGCCTTGAAGCGCCTGCCCCTCGTG CACCCCTTGCTCAAGCAGGCCGTCGCGGGCAAACCCGCTCCCGCCAGCGGAGCGGTGGGGAGCGTGAATCCCGGGGATGC GCCTCCGCTTCGTTACGTGCTCGTGGACCGCGCGAACACGCTCTTCAAGCGGATGCCCGTCATTCACCGCGCGATTCGGA GCACGGTCAGCCGGCTGACCTGA
Upstream 100 bases:
>100_bases TCCGGGAGCGTTCGCCGGAGGAGTACGCGCAGATGCTGGAGGACTACACCCAGACGCTCTGTGCCCAAGCGATCAACCAC TACCTTGAGTTCGCACAGCC
Downstream 100 bases:
>100_bases GCGTCGGCGCGTCCTGCGAGACGGAAGGCGCGCGCCGCGGCGCTTCGGTCGCCGGCGCCGCATTCAGTCGCATCCCCGCG AGCCACGCGGGAACGAACAT
Product: group 2 family glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase Domain Group 2 Family Protein; Group 2 Family Glycosyl Transferase; Glycosyl Transferase Group 2 Family; Teichuronic Acid Biosynthesis Glycosyltransferase TuaG; Glucosyltransferase
Number of amino acids: Translated: 780; Mature: 779
Protein sequence:
>780_residues MSMTRVCLVTDELYPFTPGGIGRVAHNLIMDSQRHGANVEFHVLFPPTVSVQTAQVELFFGGRVKAHLCDFREPQQTTAD AHGFYPPTEAFRDSRWHGESLEVMRYLKAREAEGLRFDVIEFADFRGWAFAALQEKHLGLAFAQTTLSVRLHSSYGTLMH HEPNTLEVENLGRYEIERKSLLDADLVVGHLPCIAEFNRRFYGFDDAWMRKVRVEFPPVVMESPAESSRPFDVPATQRNL VFVTKIQHFKQPDVFVRGAVLLMRTWPEYQGKAILACHAFDPEFLAEVKALIPSDLTDRFVFIKPGPDREAHMRAGVVVI TSSYESLNLTAYEASVAGTRLVLNSACLAFGDDSPFVDGVHCHKYDGSLDALVVAMRKALEGPELAPVRWTVDRPYWERH AREALPTRSPRSPLVSVVIINQDQGIFLPIALQGVAASTYPEVEVVIVDDGSTSAFDMQVLQRLERSAAEGEGLRVVRSP IRRGFAGARNLGVRAARGEYVVFLESDDSLSPDFIQHAVAALEARQEFSGVVPTGGRFHSSEELANRQFKGFMTYLGDCP TYALAANQVSAPTALLRRTVLEQHAYNETLSGYADWDFFLRLAQGGHRFLVTNQVHFFSRRGHAITPSASQQRQHFRWLV RLFEGVPAPLHPSTRLFALLAHSREAMVDPYGALDTHERRPSSAASASLESAQALAEAARPLRYDVVDLMNAALKRLPLV HPLLKQAVAGKPAPASGAVGSVNPGDAPPLRYVLVDRANTLFKRMPVIHRAIRSTVSRLT
Sequences:
>Translated_780_residues MSMTRVCLVTDELYPFTPGGIGRVAHNLIMDSQRHGANVEFHVLFPPTVSVQTAQVELFFGGRVKAHLCDFREPQQTTAD AHGFYPPTEAFRDSRWHGESLEVMRYLKAREAEGLRFDVIEFADFRGWAFAALQEKHLGLAFAQTTLSVRLHSSYGTLMH HEPNTLEVENLGRYEIERKSLLDADLVVGHLPCIAEFNRRFYGFDDAWMRKVRVEFPPVVMESPAESSRPFDVPATQRNL VFVTKIQHFKQPDVFVRGAVLLMRTWPEYQGKAILACHAFDPEFLAEVKALIPSDLTDRFVFIKPGPDREAHMRAGVVVI TSSYESLNLTAYEASVAGTRLVLNSACLAFGDDSPFVDGVHCHKYDGSLDALVVAMRKALEGPELAPVRWTVDRPYWERH AREALPTRSPRSPLVSVVIINQDQGIFLPIALQGVAASTYPEVEVVIVDDGSTSAFDMQVLQRLERSAAEGEGLRVVRSP IRRGFAGARNLGVRAARGEYVVFLESDDSLSPDFIQHAVAALEARQEFSGVVPTGGRFHSSEELANRQFKGFMTYLGDCP TYALAANQVSAPTALLRRTVLEQHAYNETLSGYADWDFFLRLAQGGHRFLVTNQVHFFSRRGHAITPSASQQRQHFRWLV RLFEGVPAPLHPSTRLFALLAHSREAMVDPYGALDTHERRPSSAASASLESAQALAEAARPLRYDVVDLMNAALKRLPLV HPLLKQAVAGKPAPASGAVGSVNPGDAPPLRYVLVDRANTLFKRMPVIHRAIRSTVSRLT >Mature_779_residues SMTRVCLVTDELYPFTPGGIGRVAHNLIMDSQRHGANVEFHVLFPPTVSVQTAQVELFFGGRVKAHLCDFREPQQTTADA HGFYPPTEAFRDSRWHGESLEVMRYLKAREAEGLRFDVIEFADFRGWAFAALQEKHLGLAFAQTTLSVRLHSSYGTLMHH EPNTLEVENLGRYEIERKSLLDADLVVGHLPCIAEFNRRFYGFDDAWMRKVRVEFPPVVMESPAESSRPFDVPATQRNLV FVTKIQHFKQPDVFVRGAVLLMRTWPEYQGKAILACHAFDPEFLAEVKALIPSDLTDRFVFIKPGPDREAHMRAGVVVIT SSYESLNLTAYEASVAGTRLVLNSACLAFGDDSPFVDGVHCHKYDGSLDALVVAMRKALEGPELAPVRWTVDRPYWERHA REALPTRSPRSPLVSVVIINQDQGIFLPIALQGVAASTYPEVEVVIVDDGSTSAFDMQVLQRLERSAAEGEGLRVVRSPI RRGFAGARNLGVRAARGEYVVFLESDDSLSPDFIQHAVAALEARQEFSGVVPTGGRFHSSEELANRQFKGFMTYLGDCPT YALAANQVSAPTALLRRTVLEQHAYNETLSGYADWDFFLRLAQGGHRFLVTNQVHFFSRRGHAITPSASQQRQHFRWLVR LFEGVPAPLHPSTRLFALLAHSREAMVDPYGALDTHERRPSSAASASLESAQALAEAARPLRYDVVDLMNAALKRLPLVH PLLKQAVAGKPAPASGAVGSVNPGDAPPLRYVLVDRANTLFKRMPVIHRAIRSTVSRLT
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86821; Mature: 86690
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTRVCLVTDELYPFTPGGIGRVAHNLIMDSQRHGANVEFHVLFPPTVSVQTAQVELFF CCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEEE GGRVKAHLCDFREPQQTTADAHGFYPPTEAFRDSRWHGESLEVMRYLKAREAEGLRFDVI CCCEEEECCCCCCCCHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEE EFADFRGWAFAALQEKHLGLAFAQTTLSVRLHSSYGTLMHHEPNTLEVENLGRYEIERKS ECCCCCCHHHHHHHHHHCCEEEEEEEEEEEEECCCCCEEECCCCEEECCCCCCCEEHHHH LLDADLVVGHLPCIAEFNRRFYGFDDAWMRKVRVEFPPVVMESPAESSRPFDVPATQRNL HCCHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCE VFVTKIQHFKQPDVFVRGAVLLMRTWPEYQGKAILACHAFDPEFLAEVKALIPSDLTDRF EEEEEHHHCCCCCHHHHHEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCE VFIKPGPDREAHMRAGVVVITSSYESLNLTAYEASVAGTRLVLNSACLAFGDDSPFVDGV EEEECCCCCHHHHHCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHEEECCCCCCCCCE HCHKYDGSLDALVVAMRKALEGPELAPVRWTVDRPYWERHAREALPTRSPRSPLVSVVII EEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEE NQDQGIFLPIALQGVAASTYPEVEVVIVDDGSTSAFDMQVLQRLERSAAEGEGLRVVRSP ECCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH IRRGFAGARNLGVRAARGEYVVFLESDDSLSPDFIQHAVAALEARQEFSGVVPTGGRFHS HHHCCCCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SEELANRQFKGFMTYLGDCPTYALAANQVSAPTALLRRTVLEQHAYNETLSGYADWDFFL HHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RLAQGGHRFLVTNQVHFFSRRGHAITPSASQQRQHFRWLVRLFEGVPAPLHPSTRLFALL HHHCCCCEEEEECCCHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH AHSREAMVDPYGALDTHERRPSSAASASLESAQALAEAARPLRYDVVDLMNAALKRLPLV HHCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH HPLLKQAVAGKPAPASGAVGSVNPGDAPPLRYVLVDRANTLFKRMPVIHRAIRSTVSRLT HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SMTRVCLVTDELYPFTPGGIGRVAHNLIMDSQRHGANVEFHVLFPPTVSVQTAQVELFF CCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEEE GGRVKAHLCDFREPQQTTADAHGFYPPTEAFRDSRWHGESLEVMRYLKAREAEGLRFDVI CCCEEEECCCCCCCCHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEE EFADFRGWAFAALQEKHLGLAFAQTTLSVRLHSSYGTLMHHEPNTLEVENLGRYEIERKS ECCCCCCHHHHHHHHHHCCEEEEEEEEEEEEECCCCCEEECCCCEEECCCCCCCEEHHHH LLDADLVVGHLPCIAEFNRRFYGFDDAWMRKVRVEFPPVVMESPAESSRPFDVPATQRNL HCCHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCE VFVTKIQHFKQPDVFVRGAVLLMRTWPEYQGKAILACHAFDPEFLAEVKALIPSDLTDRF EEEEEHHHCCCCCHHHHHEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCE VFIKPGPDREAHMRAGVVVITSSYESLNLTAYEASVAGTRLVLNSACLAFGDDSPFVDGV EEEECCCCCHHHHHCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHEEECCCCCCCCCE HCHKYDGSLDALVVAMRKALEGPELAPVRWTVDRPYWERHAREALPTRSPRSPLVSVVII EEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEE NQDQGIFLPIALQGVAASTYPEVEVVIVDDGSTSAFDMQVLQRLERSAAEGEGLRVVRSP ECCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH IRRGFAGARNLGVRAARGEYVVFLESDDSLSPDFIQHAVAALEARQEFSGVVPTGGRFHS HHHCCCCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SEELANRQFKGFMTYLGDCPTYALAANQVSAPTALLRRTVLEQHAYNETLSGYADWDFFL HHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RLAQGGHRFLVTNQVHFFSRRGHAITPSASQQRQHFRWLVRLFEGVPAPLHPSTRLFALL HHHCCCCEEEEECCCHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH AHSREAMVDPYGALDTHERRPSSAASASLESAQALAEAARPLRYDVVDLMNAALKRLPLV HHCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH HPLLKQAVAGKPAPASGAVGSVNPGDAPPLRYVLVDRANTLFKRMPVIHRAIRSTVSRLT HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA