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The map label for this gene is ycaC [H]

Identifier: 108761438

GI number: 108761438

Start: 2580969

End: 2581610

Strand: Direct

Name: ycaC [H]

Synonym: MXAN_2238

Alternate gene names: 108761438

Gene position: 2580969-2581610 (Clockwise)

Preceding gene: 108762617

Following gene: 108760931

Centisome position: 28.24

GC content: 60.12

Gene sequence:

>642_bases
ATGGCCAGTGAACCAATTCGTGACCCCGTGAAAGATCAGCTGCTGACCCCCAAGAATTCGGCGTTCGTCGTCATCGACTA
TCAGCCGGTTCAGGTGAACTCCATCGCGTCGATGGACCGTCAGCTGCTCGTCAACAACATTGTCGGAGCGGCCAAGGCCG
CTGTCGTGTACGGCCTGCCCATCGTTCATTCCACCGTCAACGTGAAGACCGGGCTCAACAAGCCCCCGATTCCGCAGCTG
CGCAAGGTGCTTGAGAAGTTCCCCACCTACGATCGCACTACGATCAACTCCTGGGAGGACGTGGAGTTCCGCAGCGCCAT
CGAGGCCACGGGTCGCAAGAAGCTGATTTTGACGGCACTGTGGACGGAGGCTTGCCTGACATTTCCAGCGCTCGATGCGC
TCAAGGCTGGCTACGAAATCTATGTCGTCGCTGACGCGGTGGGCGGCACCTCTGTGGCGGCGCACGAAGCCGGTCTGCGT
CGCATCGAGCAGGCCGGCGGCAAGATAATCAGCGTGCCGCAGCTCTTCTGTGAGCTGCAGCGCGATTGGTCGCGCAAAGA
GACGGTCCCTGCATTCATGGACCTCTTCATTCAGACCGGAGGCACCGCGGGTATCCAGTTCTCCTACGACTGGAGCGAAT
GA

Upstream 100 bases:

>100_bases
ATCGGCTCTTGATCGAGAGCTATGCGAAAGCGCAGCAGGTCGCCAAGGAAGGCGAGCAGCTCGACTCGCAGCGCAAGTAG
GCGACGAAAGGAGAATCACA

Downstream 100 bases:

>100_bases
CCCTTCGAGCCGTCGCCGCGTGGAACGAGACGGTTCGGCGAGTCTCGAACAGCGAAAGGACGCGACAGAACATGAGCTGG
ACGCAATCGCTTGAACCTGT

Product: isochorismatase superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MASEPIRDPVKDQLLTPKNSAFVVIDYQPVQVNSIASMDRQLLVNNIVGAAKAAVVYGLPIVHSTVNVKTGLNKPPIPQL
RKVLEKFPTYDRTTINSWEDVEFRSAIEATGRKKLILTALWTEACLTFPALDALKAGYEIYVVADAVGGTSVAAHEAGLR
RIEQAGGKIISVPQLFCELQRDWSRKETVPAFMDLFIQTGGTAGIQFSYDWSE

Sequences:

>Translated_213_residues
MASEPIRDPVKDQLLTPKNSAFVVIDYQPVQVNSIASMDRQLLVNNIVGAAKAAVVYGLPIVHSTVNVKTGLNKPPIPQL
RKVLEKFPTYDRTTINSWEDVEFRSAIEATGRKKLILTALWTEACLTFPALDALKAGYEIYVVADAVGGTSVAAHEAGLR
RIEQAGGKIISVPQLFCELQRDWSRKETVPAFMDLFIQTGGTAGIQFSYDWSE
>Mature_212_residues
ASEPIRDPVKDQLLTPKNSAFVVIDYQPVQVNSIASMDRQLLVNNIVGAAKAAVVYGLPIVHSTVNVKTGLNKPPIPQLR
KVLEKFPTYDRTTINSWEDVEFRSAIEATGRKKLILTALWTEACLTFPALDALKAGYEIYVVADAVGGTSVAAHEAGLRR
IEQAGGKIISVPQLFCELQRDWSRKETVPAFMDLFIQTGGTAGIQFSYDWSE

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=170, Percent_Identity=31.1764705882353, Blast_Score=107, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23437; Mature: 23306

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASEPIRDPVKDQLLTPKNSAFVVIDYQPVQVNSIASMDRQLLVNNIVGAAKAAVVYGLP
CCCCCCCCCHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCH
IVHSTVNVKTGLNKPPIPQLRKVLEKFPTYDRTTINSWEDVEFRSAIEATGRKKLILTAL
HHHCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHH
WTEACLTFPALDALKAGYEIYVVADAVGGTSVAAHEAGLRRIEQAGGKIISVPQLFCELQ
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHH
RDWSRKETVPAFMDLFIQTGGTAGIQFSYDWSE
HHHCHHCCHHHHHHHHHHCCCCCCEEEEECCCC
>Mature Secondary Structure 
ASEPIRDPVKDQLLTPKNSAFVVIDYQPVQVNSIASMDRQLLVNNIVGAAKAAVVYGLP
CCCCCCCCHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCH
IVHSTVNVKTGLNKPPIPQLRKVLEKFPTYDRTTINSWEDVEFRSAIEATGRKKLILTAL
HHHCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHH
WTEACLTFPALDALKAGYEIYVVADAVGGTSVAAHEAGLRRIEQAGGKIISVPQLFCELQ
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHH
RDWSRKETVPAFMDLFIQTGGTAGIQFSYDWSE
HHHCHHCCHHHHHHHHHHCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]