| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is leuS [H]
Identifier: 108761325
GI number: 108761325
Start: 5943324
End: 5945819
Strand: Reverse
Name: leuS [H]
Synonym: MXAN_4745
Alternate gene names: 108761325
Gene position: 5945819-5943324 (Counterclockwise)
Preceding gene: 108763466
Following gene: 108757452
Centisome position: 65.05
GC content: 67.51
Gene sequence:
>2496_bases ATGAACGAGCGTTACGAGCCGCAGGCGATTGAAGGTAAGTGGCAGACCCGTTGGGACGACGCGGGCATCTTCCGGGCAGG CAGCCGCCCCGGTGCACCCAAGAAGTACGTGCTCGAGATGCTGCCGTACCCCAGCGGGAAGATGCACATGGGGCATGTCC GCAACTACCTGCTCGGGGACGTGTACGCGCGTTACTTCCGGATGAAGGGCTTCGACGTGCTGCATCCCATGGGCTGGGAT GCGCTCGGCCTGCCGGCCGAGAACGCGGCCATCAAGGACGGCGTGCACCCGGCGGTGCGCACGGCCGAGAACATCGCGTC CTTCAAGAAGGAAATCAAAAGCCTGGGCTACTGCTACGACTGGGATCGCGAGGTCAACACCAGCGATCCCGAGTACTACC GCTGGAATCAGTGGTTCTTCATCCAGATGCTGGAGCGTGGGCTCGTCTATCGCCGCTTCAGCAAGGTGAACTGGTGTACG GGCTGCCACACCGTCATCGCCAACGAGCAGGTGAAGGACGGCGTCTGCGAGCGCTGCGACTCCCCCGTGGTGGACAAGGA GATGCCCGAGTGGGCGTTCCGCATCACCCGGTTCTCGCAGGAGTTGCTGGACGCGCTGGACACGCTCAAGGAGTGGCCCC ACCGCATCACCGCCGCGCAGCGGAACTGGATTGGCCGTTCGGACGGTGCCGAGGCCGACTTCCGCGTGCAGGGGCACGAC ACCGCGCTGCGCGTGTTCACCACCCGCATCGACACCATCTTCGGCTGCACCTACGTGGTGCTGGCGCCGGACCACGAGTT GGTGGCCCAGGTGACGACGCCGGAGCGCCGCGCGGAGGTGGAAGCCTTCGCCAAGCGCATGGCCGCGCAGTCCAAGACGG AGCGCCTGGGCGAGGGCACGGAGAAGGAGGGCGTCTTTACTGGCGCCTACGCGGAGAATCCCTTCACCGGCCAGGCGGTC CCCATCTGGATCGCCAACTTCGTGCTGAGCGACTACGGCACCGGCGCGGTGATGAGCGTGCCCGCGCATGACGAGCGCGA CTTCGCCTTCGCGCGCAAGTACAGCCTGCCTGTGAAGGTCGTCATCCAGCCCGCGTCCGGTGACAAGCTCCCGCCGGGTG ACAAGCTGGAGGCGGCCTATACGGAGTACGGCGTGCTGGAGGACTCGGGCGCCTACACGGGCCAGACATCCGAGCAGGCG CGTCAGGCCATGGCCGCGTTGCTGGAGAAGGACGGCAAGGGCAAGGCGACGGTGACGTACCGCCAGAAGGACTGGGGCTT CAGCCGCCAGCGCTACTGGGGCACGCCCATCCCCATCGTCTACTGCGAGAAGTGCGACCCGGACCGCAATGGCATCCCGG TGCCGGTGGCGCAGCTGCCCGTGCGCCTGCCGGAGATCGACACCCAGGCGGTGCTCACCGGCAAGGGTGAGCCGCCGCTG GCGAAGGTGGCCTCGTGGGTGAACACCTCGTGTCCGAAGTGCGGCGGGCCTGCCCGGCGCGAGGCGGAGACGATGGACAC CTTCGTTGACTCCTGCTGGTACTTCGCGCGCTACCTGTCGCCGCACTACGACGCCGCGCCGTTCGACCCGAAGGAGGCCC AGCGCTTCCTGCCCGTGGACATCTACGTGGGGGGGCCCGAGCACGCGGTGATGCACCTGCTCTATTTCCGCTTCTGGACG CGGGTGATGAAGCTGTTGGGGCTGAGCCCCGTGGATGAGCCCGTCAAGCGCCTCATCACCCAGGGCATCGTCAACGGGCC GGATGGCCGGAAGATGTCCAAGCGCTGGGGCAACGTGGTGGCGCCTGCCTCCATCGTCCAGAAGTACGGCGCGGACACGG CGCGGGCCTACGTGTTGTTCGCGGGCCCGCCAGAGCGGGACTTCGACTGGTCCGATGAGCAGGTGGAGGGCGTGTACCGC TTCCTCAAGCGCGTCTGGGCGCTGGCCGCCACGCACCAGGCGGCGGCCGCGGGTGCCACCCATGACGGGCCCTACGAGGG CAAGGCGCTGGAGATCCTCCGCGCCGCCCACAAGACGCTGAAGCGGGTGGGGGAGGCCATCGAGCGCCTGTCCTTCAACA CGGCCATCGCCGGCATCATGGAAGGCCTCAACGCGCTCTACGCACTGGGGACACCTGAAACGGCCGCGGAGAAGGCCGCC ATGGCGGAGGCCGTGCGGTTGCTGGCGGTTGTGCTCACGCCGTTCACGCCGCACATCGCGGACGAAATCGCGGAGGCCTA TGGCAGCAAGGACTTCACCGTCGCGCAGTCCTGGCCGGAGTTCGATCCGGCGCTGGTGGTGGACGACGTCATCCCCTACG CCGTGCAGGTGAACGGCAAGCTGCGCGCGGAGATTCGCGTGGCGGCGGACGCGGCGGAGGCGGATGTTCGCGCCGCGGCA GAAGCGGACGAAAAGGTCCAGGTGGCCCTGGCGGGGAAGACGCTGCGCAAGTTCGTCTTCGTCCCCAAGCGCCTCGTGAA CTTCGTCGCGACCTGA
Upstream 100 bases:
>100_bases CAGCCGATCCTGGGGCCGCCGTCCGTCCGGGACGGATTTCTCCGGGCGAGACTGTTGCCTGGGGCACGTCCCTCCTCTAA GAGACTCGATGGGTATGGTG
Downstream 100 bases:
>100_bases GCGGGGATCCGGGTGCCGGCCGAGGTCCTCGTCATGTGTGGTGCATGTGGGCGGCCCCAACCCGCGGGCCGCCCGCGGTG CATTGCCTGCGAGGCCGTGC
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 831; Mature: 831
Protein sequence:
>831_residues MNERYEPQAIEGKWQTRWDDAGIFRAGSRPGAPKKYVLEMLPYPSGKMHMGHVRNYLLGDVYARYFRMKGFDVLHPMGWD ALGLPAENAAIKDGVHPAVRTAENIASFKKEIKSLGYCYDWDREVNTSDPEYYRWNQWFFIQMLERGLVYRRFSKVNWCT GCHTVIANEQVKDGVCERCDSPVVDKEMPEWAFRITRFSQELLDALDTLKEWPHRITAAQRNWIGRSDGAEADFRVQGHD TALRVFTTRIDTIFGCTYVVLAPDHELVAQVTTPERRAEVEAFAKRMAAQSKTERLGEGTEKEGVFTGAYAENPFTGQAV PIWIANFVLSDYGTGAVMSVPAHDERDFAFARKYSLPVKVVIQPASGDKLPPGDKLEAAYTEYGVLEDSGAYTGQTSEQA RQAMAALLEKDGKGKATVTYRQKDWGFSRQRYWGTPIPIVYCEKCDPDRNGIPVPVAQLPVRLPEIDTQAVLTGKGEPPL AKVASWVNTSCPKCGGPARREAETMDTFVDSCWYFARYLSPHYDAAPFDPKEAQRFLPVDIYVGGPEHAVMHLLYFRFWT RVMKLLGLSPVDEPVKRLITQGIVNGPDGRKMSKRWGNVVAPASIVQKYGADTARAYVLFAGPPERDFDWSDEQVEGVYR FLKRVWALAATHQAAAAGATHDGPYEGKALEILRAAHKTLKRVGEAIERLSFNTAIAGIMEGLNALYALGTPETAAEKAA MAEAVRLLAVVLTPFTPHIADEIAEAYGSKDFTVAQSWPEFDPALVVDDVIPYAVQVNGKLRAEIRVAADAAEADVRAAA EADEKVQVALAGKTLRKFVFVPKRLVNFVAT
Sequences:
>Translated_831_residues MNERYEPQAIEGKWQTRWDDAGIFRAGSRPGAPKKYVLEMLPYPSGKMHMGHVRNYLLGDVYARYFRMKGFDVLHPMGWD ALGLPAENAAIKDGVHPAVRTAENIASFKKEIKSLGYCYDWDREVNTSDPEYYRWNQWFFIQMLERGLVYRRFSKVNWCT GCHTVIANEQVKDGVCERCDSPVVDKEMPEWAFRITRFSQELLDALDTLKEWPHRITAAQRNWIGRSDGAEADFRVQGHD TALRVFTTRIDTIFGCTYVVLAPDHELVAQVTTPERRAEVEAFAKRMAAQSKTERLGEGTEKEGVFTGAYAENPFTGQAV PIWIANFVLSDYGTGAVMSVPAHDERDFAFARKYSLPVKVVIQPASGDKLPPGDKLEAAYTEYGVLEDSGAYTGQTSEQA RQAMAALLEKDGKGKATVTYRQKDWGFSRQRYWGTPIPIVYCEKCDPDRNGIPVPVAQLPVRLPEIDTQAVLTGKGEPPL AKVASWVNTSCPKCGGPARREAETMDTFVDSCWYFARYLSPHYDAAPFDPKEAQRFLPVDIYVGGPEHAVMHLLYFRFWT RVMKLLGLSPVDEPVKRLITQGIVNGPDGRKMSKRWGNVVAPASIVQKYGADTARAYVLFAGPPERDFDWSDEQVEGVYR FLKRVWALAATHQAAAAGATHDGPYEGKALEILRAAHKTLKRVGEAIERLSFNTAIAGIMEGLNALYALGTPETAAEKAA MAEAVRLLAVVLTPFTPHIADEIAEAYGSKDFTVAQSWPEFDPALVVDDVIPYAVQVNGKLRAEIRVAADAAEADVRAAA EADEKVQVALAGKTLRKFVFVPKRLVNFVAT >Mature_831_residues MNERYEPQAIEGKWQTRWDDAGIFRAGSRPGAPKKYVLEMLPYPSGKMHMGHVRNYLLGDVYARYFRMKGFDVLHPMGWD ALGLPAENAAIKDGVHPAVRTAENIASFKKEIKSLGYCYDWDREVNTSDPEYYRWNQWFFIQMLERGLVYRRFSKVNWCT GCHTVIANEQVKDGVCERCDSPVVDKEMPEWAFRITRFSQELLDALDTLKEWPHRITAAQRNWIGRSDGAEADFRVQGHD TALRVFTTRIDTIFGCTYVVLAPDHELVAQVTTPERRAEVEAFAKRMAAQSKTERLGEGTEKEGVFTGAYAENPFTGQAV PIWIANFVLSDYGTGAVMSVPAHDERDFAFARKYSLPVKVVIQPASGDKLPPGDKLEAAYTEYGVLEDSGAYTGQTSEQA RQAMAALLEKDGKGKATVTYRQKDWGFSRQRYWGTPIPIVYCEKCDPDRNGIPVPVAQLPVRLPEIDTQAVLTGKGEPPL AKVASWVNTSCPKCGGPARREAETMDTFVDSCWYFARYLSPHYDAAPFDPKEAQRFLPVDIYVGGPEHAVMHLLYFRFWT RVMKLLGLSPVDEPVKRLITQGIVNGPDGRKMSKRWGNVVAPASIVQKYGADTARAYVLFAGPPERDFDWSDEQVEGVYR FLKRVWALAATHQAAAAGATHDGPYEGKALEILRAAHKTLKRVGEAIERLSFNTAIAGIMEGLNALYALGTPETAAEKAA MAEAVRLLAVVLTPFTPHIADEIAEAYGSKDFTVAQSWPEFDPALVVDDVIPYAVQVNGKLRAEIRVAADAAEADVRAAA EADEKVQVALAGKTLRKFVFVPKRLVNFVAT
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=882, Percent_Identity=33.9002267573696, Blast_Score=475, Evalue=1e-134, Organism=Escherichia coli, GI1786861, Length=877, Percent_Identity=44.6978335233751, Blast_Score=691, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=190, Percent_Identity=24.2105263157895, Blast_Score=68, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71997517, Length=800, Percent_Identity=28.5, Blast_Score=305, Evalue=9e-83, Organism=Caenorhabditis elegans, GI71997510, Length=800, Percent_Identity=28.5, Blast_Score=304, Evalue=1e-82, Organism=Caenorhabditis elegans, GI212645227, Length=324, Percent_Identity=29.0123456790123, Blast_Score=117, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6323414, Length=862, Percent_Identity=35.0348027842227, Blast_Score=504, Evalue=1e-143, Organism=Saccharomyces cerevisiae, GI6321531, Length=871, Percent_Identity=21.8140068886338, Blast_Score=121, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6319395, Length=692, Percent_Identity=22.8323699421965, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6325217, Length=140, Percent_Identity=30.7142857142857, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI21355409, Length=858, Percent_Identity=32.0512820512821, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI17864482, Length=676, Percent_Identity=22.9289940828402, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI24653289, Length=676, Percent_Identity=22.9289940828402, Blast_Score=107, Evalue=3e-23,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 92678; Mature: 92678
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERYEPQAIEGKWQTRWDDAGIFRAGSRPGAPKKYVLEMLPYPSGKMHMGHVRNYLLGD CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHH VYARYFRMKGFDVLHPMGWDALGLPAENAAIKDGVHPAVRTAENIASFKKEIKSLGYCYD HHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEC WDREVNTSDPEYYRWNQWFFIQMLERGLVYRRFSKVNWCTGCHTVIANEQVKDGVCERCD CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHCCCHHHHHHHHHCC SPVVDKEMPEWAFRITRFSQELLDALDTLKEWPHRITAAQRNWIGRSDGAEADFRVQGHD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC TALRVFTTRIDTIFGCTYVVLAPDHELVAQVTTPERRAEVEAFAKRMAAQSKTERLGEGT CEEHHHHHHHHHHHCCEEEEECCCHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC EKEGVFTGAYAENPFTGQAVPIWIANFVLSDYGTGAVMSVPAHDERDFAFARKYSLPVKV CCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHCCCCEEE VIQPASGDKLPPGDKLEAAYTEYGVLEDSGAYTGQTSEQARQAMAALLEKDGKGKATVTY EEEECCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE RQKDWGFSRQRYWGTPIPIVYCEKCDPDRNGIPVPVAQLPVRLPEIDTQAVLTGKGEPPL ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCH AKVASWVNTSCPKCGGPARREAETMDTFVDSCWYFARYLSPHYDAAPFDPKEAQRFLPVD HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCEEEEE IYVGGPEHAVMHLLYFRFWTRVMKLLGLSPVDEPVKRLITQGIVNGPDGRKMSKRWGNVV EEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCC APASIVQKYGADTARAYVLFAGPPERDFDWSDEQVEGVYRFLKRVWALAATHQAAAAGAT CHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HDGPYEGKALEILRAAHKTLKRVGEAIERLSFNTAIAGIMEGLNALYALGTPETAAEKAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH MAEAVRLLAVVLTPFTPHIADEIAEAYGSKDFTVAQSWPEFDPALVVDDVIPYAVQVNGK HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEHHCCCCEEEEECCE LRAEIRVAADAAEADVRAAAEADEKVQVALAGKTLRKFVFVPKRLVNFVAT EEEEEEEECCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNERYEPQAIEGKWQTRWDDAGIFRAGSRPGAPKKYVLEMLPYPSGKMHMGHVRNYLLGD CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHH VYARYFRMKGFDVLHPMGWDALGLPAENAAIKDGVHPAVRTAENIASFKKEIKSLGYCYD HHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEC WDREVNTSDPEYYRWNQWFFIQMLERGLVYRRFSKVNWCTGCHTVIANEQVKDGVCERCD CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHCCCHHHHHHHHHCC SPVVDKEMPEWAFRITRFSQELLDALDTLKEWPHRITAAQRNWIGRSDGAEADFRVQGHD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC TALRVFTTRIDTIFGCTYVVLAPDHELVAQVTTPERRAEVEAFAKRMAAQSKTERLGEGT CEEHHHHHHHHHHHCCEEEEECCCHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC EKEGVFTGAYAENPFTGQAVPIWIANFVLSDYGTGAVMSVPAHDERDFAFARKYSLPVKV CCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHCCCCEEE VIQPASGDKLPPGDKLEAAYTEYGVLEDSGAYTGQTSEQARQAMAALLEKDGKGKATVTY EEEECCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE RQKDWGFSRQRYWGTPIPIVYCEKCDPDRNGIPVPVAQLPVRLPEIDTQAVLTGKGEPPL ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCH AKVASWVNTSCPKCGGPARREAETMDTFVDSCWYFARYLSPHYDAAPFDPKEAQRFLPVD HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCEEEEE IYVGGPEHAVMHLLYFRFWTRVMKLLGLSPVDEPVKRLITQGIVNGPDGRKMSKRWGNVV EEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCC APASIVQKYGADTARAYVLFAGPPERDFDWSDEQVEGVYRFLKRVWALAATHQAAAAGAT CHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HDGPYEGKALEILRAAHKTLKRVGEAIERLSFNTAIAGIMEGLNALYALGTPETAAEKAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH MAEAVRLLAVVLTPFTPHIADEIAEAYGSKDFTVAQSWPEFDPALVVDDVIPYAVQVNGK HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEHHCCCCEEEEECCE LRAEIRVAADAAEADVRAAAEADEKVQVALAGKTLRKFVFVPKRLVNFVAT EEEEEEEECCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA