| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is plsC [H]
Identifier: 108761281
GI number: 108761281
Start: 3872898
End: 3873692
Strand: Reverse
Name: plsC [H]
Synonym: MXAN_3330
Alternate gene names: 108761281
Gene position: 3873692-3872898 (Counterclockwise)
Preceding gene: 108762434
Following gene: 108761841
Centisome position: 42.38
GC content: 67.8
Gene sequence:
>795_bases ATGCGCAAGCTCTTTTGCATTTTCGTGGCGGGCGTCTGGACGCTCTTCTGTTTCCCCCTTGCCATCTTGGCGATGCTGCT CACGCTCAACCCATCGCGCTCCGTCTGGGTGGCGCGCGAGCTCTGGTCGCCCGTGCTGCTGTGGGCAGGGGGCGCGAAGC TGGAAGTCATCGGCCAGGAGAACGTGGACCCGAATCGGCCCACCATCTACGTGGCCAACCACCAGTCCACCATCGACATC CCGGCGCACTTCCTGGCCGTCCCCATCCCTTTCCGCTACGTCGCCAAGACGCAGCTCAAGTGGGTGCCCCTTATCGGCTG GTACCTCGCGCTCGCAGGCCACGTTTTCATCAACCGGTCCAACCGCTCCAAGGCCATCGCCTCGCTCAACGCGGCAGCGG CCAAGATTCGCGGCGGCACCAGCATCTTCCTGTATCCGGAAGGCACCCGCTCGACGGACGGCCGCGTCCTGCCCTTCAAG AAGGGCCCCTTCGCCCTGGCGCTGAAGGCCCGCGTCCCCGTCTGCCCCGTCACCATCGAGGGCTCCGGCGACCTGATGCC CAAGTCCACCTGGAACATCACCCCCGGTCCCATCCGCGTGAAGATTGGCAAGCCCATCGACACGACCACGTTCGCCGAGA ACGACCGCGAAGGGCTGGCCCGAGCCGTCCGCGCCGTCATCATCGCGGACAGCCTGTCCCTCGGGGGCAAGGGCGGCGAC GTGGATGACGCCGTGGCCGCCGCGGGCGCCGAGGGCGTCAGCGACGCGCGCGCCCGAGCCCTCTCCTCCCCCTGA
Upstream 100 bases:
>100_bases TCGCCGCCTGACCGTCTGGCCAGGGAGCTTCGGCGGGCAAGCCCGCGGGCCCGGGCACCTTCCGGCCCTGAACATCGGCC CCCAGGAGGCGGGCTGAGGG
Downstream 100 bases:
>100_bases GACGCCTCTCCGAGATGACCATTCGCCACCTCCGTTCCCGTCCCTGGATTCGCGCCGCGGTACTCGGCGTGGGCCTCCTG ACTGGTTGCAGCACCACCTC
Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase family protein
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MRKLFCIFVAGVWTLFCFPLAILAMLLTLNPSRSVWVARELWSPVLLWAGGAKLEVIGQENVDPNRPTIYVANHQSTIDI PAHFLAVPIPFRYVAKTQLKWVPLIGWYLALAGHVFINRSNRSKAIASLNAAAAKIRGGTSIFLYPEGTRSTDGRVLPFK KGPFALALKARVPVCPVTIEGSGDLMPKSTWNITPGPIRVKIGKPIDTTTFAENDREGLARAVRAVIIADSLSLGGKGGD VDDAVAAAGAEGVSDARARALSSP
Sequences:
>Translated_264_residues MRKLFCIFVAGVWTLFCFPLAILAMLLTLNPSRSVWVARELWSPVLLWAGGAKLEVIGQENVDPNRPTIYVANHQSTIDI PAHFLAVPIPFRYVAKTQLKWVPLIGWYLALAGHVFINRSNRSKAIASLNAAAAKIRGGTSIFLYPEGTRSTDGRVLPFK KGPFALALKARVPVCPVTIEGSGDLMPKSTWNITPGPIRVKIGKPIDTTTFAENDREGLARAVRAVIIADSLSLGGKGGD VDDAVAAAGAEGVSDARARALSSP >Mature_264_residues MRKLFCIFVAGVWTLFCFPLAILAMLLTLNPSRSVWVARELWSPVLLWAGGAKLEVIGQENVDPNRPTIYVANHQSTIDI PAHFLAVPIPFRYVAKTQLKWVPLIGWYLALAGHVFINRSNRSKAIASLNAAAAKIRGGTSIFLYPEGTRSTDGRVLPFK KGPFALALKARVPVCPVTIEGSGDLMPKSTWNITPGPIRVKIGKPIDTTTFAENDREGLARAVRAVIIADSLSLGGKGGD VDDAVAAAGAEGVSDARARALSSP
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=232, Percent_Identity=31.0344827586207, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI15100175, Length=232, Percent_Identity=31.0344827586207, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI6041665, Length=252, Percent_Identity=27.3809523809524, Blast_Score=96, Evalue=3e-20, Organism=Escherichia coli, GI1789395, Length=203, Percent_Identity=29.5566502463054, Blast_Score=89, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17568319, Length=198, Percent_Identity=27.2727272727273, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17564032, Length=181, Percent_Identity=28.7292817679558, Blast_Score=93, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6320151, Length=212, Percent_Identity=33.0188679245283, Blast_Score=121, Evalue=9e-29, Organism=Drosophila melanogaster, GI281364648, Length=241, Percent_Identity=29.8755186721992, Blast_Score=107, Evalue=8e-24, Organism=Drosophila melanogaster, GI24582856, Length=241, Percent_Identity=29.8755186721992, Blast_Score=107, Evalue=8e-24, Organism=Drosophila melanogaster, GI24582854, Length=241, Percent_Identity=29.8755186721992, Blast_Score=107, Evalue=8e-24, Organism=Drosophila melanogaster, GI24641614, Length=196, Percent_Identity=30.1020408163265, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24641612, Length=196, Percent_Identity=30.1020408163265, Blast_Score=85, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 28338; Mature: 28338
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLFCIFVAGVWTLFCFPLAILAMLLTLNPSRSVWVARELWSPVLLWAGGAKLEVIGQE CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCEEEEECCCEEEEEECC NVDPNRPTIYVANHQSTIDIPAHFLAVPIPFRYVAKTQLKWVPLIGWYLALAGHVFINRS CCCCCCCEEEEECCCCEEECCCEEEEECCCHHHHHHCCCEEEHHHHHHHHHHCEEEEECC NRSKAIASLNAAAAKIRGGTSIFLYPEGTRSTDGRVLPFKKGPFALALKARVPVCPVTIE CCCHHHHHHHHHHHEECCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEC GSGDLMPKSTWNITPGPIRVKIGKPIDTTTFAENDREGLARAVRAVIIADSLSLGGKGGD CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCC VDDAVAAAGAEGVSDARARALSSP HHHHHHHCCCCCCCHHHHHHCCCC >Mature Secondary Structure MRKLFCIFVAGVWTLFCFPLAILAMLLTLNPSRSVWVARELWSPVLLWAGGAKLEVIGQE CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCEEEEECCCEEEEEECC NVDPNRPTIYVANHQSTIDIPAHFLAVPIPFRYVAKTQLKWVPLIGWYLALAGHVFINRS CCCCCCCEEEEECCCCEEECCCEEEEECCCHHHHHHCCCEEEHHHHHHHHHHCEEEEECC NRSKAIASLNAAAAKIRGGTSIFLYPEGTRSTDGRVLPFKKGPFALALKARVPVCPVTIE CCCHHHHHHHHHHHEECCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEC GSGDLMPKSTWNITPGPIRVKIGKPIDTTTFAENDREGLARAVRAVIIADSLSLGGKGGD CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCC VDDAVAAAGAEGVSDARARALSSP HHHHHHHCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]