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The map label for this gene is yrbE [C]

Identifier: 108761216

GI number: 108761216

Start: 297199

End: 297951

Strand: Direct

Name: yrbE [C]

Synonym: MXAN_0249

Alternate gene names: 108761216

Gene position: 297199-297951 (Clockwise)

Preceding gene: 108758566

Following gene: 108761013

Centisome position: 3.25

GC content: 69.59

Gene sequence:

>753_bases
ATGGACCGCGCGAAGGAGCGCCTGGAGTCACTGGGCGCCCTGTCGCGGATGACGGGGCAGGTGTTCAGTCGCGCGGTGCG
TCCGCCCTTTGACTGGCGCGGGCTCGTGTACCACACGGAGTCGCTGGGCGTGCGCTCGCTGCCCATCGCCCTGCTCACCG
CGATGTTCGCGGGGCTCGTCATCTCGTTGCAGTTCGGCTACTTCCTGTCGCGCTTCGGCGTGCAGTACACCGTGGGCCGC
GTGGTCATCCTCACGCTGTTCCGCGAGCTGGCGCCGGTGCTCACCGCGCTCACCGTGGGCGCGCGCATCGGCAGTGGCAT
CGCCGCGGAGCTGGGCGCGATGACGGTGACGGAGCAGGTGGACGCCATCCGCGCGCTGGGCGCCGACCCGCTGCGCAAGT
TGGTGGTGCCCCGCGTGCTGGCGTGCCTGATTGTGTTGCCGGTGCTCACCGTGTTCGCGGACGTCGTGGGCCTGGTGGCG
GGCGCGCTGGTGGTGAACATCCAGTACGCGATTACGCTCAACCTCTTCTTCCAGGGCGCGCTGGACGCGGTGCTGATGCC
GGACTTCGCCTCGGGTGTGTTCAAGGGCGCGGTGTTCGGACTCATCATCGGCCTGGTGGGCTGCTTCCGCGGCCTCACCG
TGGAGGGCGGCACGGAGGGCGTGGGCCGCGCCACCACCCAGACGGTGGCGACCACGTCCGTCTCCGTGTGCCTGGCGGAC
TTCTTCATCACCCAGCTCACGCTGAGCCTGTGA

Upstream 100 bases:

>100_bases
ACTTCGACGCGCTGCTGGCCGGCTTCGAATCGGAGCGCAAGGGATGACGACGCGGCAGCCCGAGGTGGACGCGGCGGCGG
CCTCCGGGCCCCCGAGCCTC

Downstream 100 bases:

>100_bases
CGTGCCATGCGCTCCTCGTCCCAGACGACTTCCGAGTTCGCGTTCCAGCCGCCCCGGCCGGGTGAGCAGCTCATCTATTT
CGAGCACCTGACGAAGGCGT

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MDRAKERLESLGALSRMTGQVFSRAVRPPFDWRGLVYHTESLGVRSLPIALLTAMFAGLVISLQFGYFLSRFGVQYTVGR
VVILTLFRELAPVLTALTVGARIGSGIAAELGAMTVTEQVDAIRALGADPLRKLVVPRVLACLIVLPVLTVFADVVGLVA
GALVVNIQYAITLNLFFQGALDAVLMPDFASGVFKGAVFGLIIGLVGCFRGLTVEGGTEGVGRATTQTVATTSVSVCLAD
FFITQLTLSL

Sequences:

>Translated_250_residues
MDRAKERLESLGALSRMTGQVFSRAVRPPFDWRGLVYHTESLGVRSLPIALLTAMFAGLVISLQFGYFLSRFGVQYTVGR
VVILTLFRELAPVLTALTVGARIGSGIAAELGAMTVTEQVDAIRALGADPLRKLVVPRVLACLIVLPVLTVFADVVGLVA
GALVVNIQYAITLNLFFQGALDAVLMPDFASGVFKGAVFGLIIGLVGCFRGLTVEGGTEGVGRATTQTVATTSVSVCLAD
FFITQLTLSL
>Mature_250_residues
MDRAKERLESLGALSRMTGQVFSRAVRPPFDWRGLVYHTESLGVRSLPIALLTAMFAGLVISLQFGYFLSRFGVQYTVGR
VVILTLFRELAPVLTALTVGARIGSGIAAELGAMTVTEQVDAIRALGADPLRKLVVPRVLACLIVLPVLTVFADVVGLVA
GALVVNIQYAITLNLFFQGALDAVLMPDFASGVFKGAVFGLIIGLVGCFRGLTVEGGTEGVGRATTQTVATTSVSVCLAD
FFITQLTLSL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=213, Percent_Identity=34.7417840375587, Blast_Score=117, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26468; Mature: 26468

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]