Click here to switch to the map view.

The map label for this gene is 108761212

Identifier: 108761212

GI number: 108761212

Start: 5589134

End: 5589841

Strand: Reverse

Name: 108761212

Synonym: MXAN_4511

Alternate gene names: NA

Gene position: 5589841-5589134 (Counterclockwise)

Preceding gene: 108757143

Following gene: 108759760

Centisome position: 61.16

GC content: 61.16

Gene sequence:

>708_bases
ATGCGCAGAGCGAAGCGCCCGTACGTGATTTGCCACATGGTGCCCTCCATCGATGGGCGCATTGTCACGAGGAACTGGAA
GCTCTCGTCGCGCGCCCTGTCCGAGTACGAGCGGACGGCGGAGACGTTCGACGCCGATGGCTGGATGATTGGGCGGATTT
CGATGGAACCCTACGCGGGGAAGGCGAAGGTCCCGGTACGCAAGTCAGGCCAGCCGATTCCAAGGACGGACTTCATCGCG
AGGCGTGACGCGGAGTCCTACGCCATCGCGCTGGACCCCACGGGCAAGCTCACCTGGAAGTTTGGCTCCATCGATGACGA
GCACGTCATCACCATTCTCACGGAGCAGGTCTCTGACGACTACCTGGCCTTCCTCCAGTCGAAGGGCGTCTCTTACCTGT
TTGGCGGCAAGACGGAGCTGAACTTGACGAGGGTGCTCGAAAAGCTCCGTAAGGACTTCGGCATCAAGCGGTTGCTCCTG
GAGGGCGGTGGGAAGATCAACGGCTCCTTCCTGGCAGAGGACCTCATCGACGAGCTGAGTGTCTTGGTGGCGCCCATCGC
GGATGGTTCCATCGGAACGCCTTCTCTGTTCGATGCGGGCGAGGGAAGGGGCCCGGCCCGTCATCTCAAGCTGGTCTCCT
GCGAGCCGCGGAAGAGCGACATGCTCTGGCTGAAGTACAAGGTGCGCAAATCAGAATCGAAAAGGTGA

Upstream 100 bases:

>100_bases
GGGGCACCCCCGCCGCTGGAAAGCCGTTTGAGGCGGTCCCAGGGGCTCGTCAGGAAGACGTCACCCTGACGACCGCGCCC
AGAGTCCGAGGAGACAGCAG

Downstream 100 bases:

>100_bases
TGAGCAGAAGGGGCGGGGTGGACTGCCACGTTAGCGGCGCCATGTGTCACGGGCGCCGTCAGCGGAGCCCAGGGGCGTGG
TGCGGAGCTCGGAGGGGGGC

Product: riboflavin biosynthesis protein RibD domain-containing protein

Products: NA

Alternate protein names: Bifunctional Deaminase-Reductase Domain Protein; Deaminase-Reductase Domain-Containing Protein; Pyrimidine Reductase; Riboflavin-Specific Deaminase; Bifunctional Deaminase-Reductase Domain-Containing Protein; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase Protein; Ribd Domain Protein; Pyrimidine Reductase Riboflavin Biosynthesis; 5-Amino-6-(5-Phosphoribosylamino) Uracil Reductase; RibD-Family Protein

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRRAKRPYVICHMVPSIDGRIVTRNWKLSSRALSEYERTAETFDADGWMIGRISMEPYAGKAKVPVRKSGQPIPRTDFIA
RRDAESYAIALDPTGKLTWKFGSIDDEHVITILTEQVSDDYLAFLQSKGVSYLFGGKTELNLTRVLEKLRKDFGIKRLLL
EGGGKINGSFLAEDLIDELSVLVAPIADGSIGTPSLFDAGEGRGPARHLKLVSCEPRKSDMLWLKYKVRKSESKR

Sequences:

>Translated_235_residues
MRRAKRPYVICHMVPSIDGRIVTRNWKLSSRALSEYERTAETFDADGWMIGRISMEPYAGKAKVPVRKSGQPIPRTDFIA
RRDAESYAIALDPTGKLTWKFGSIDDEHVITILTEQVSDDYLAFLQSKGVSYLFGGKTELNLTRVLEKLRKDFGIKRLLL
EGGGKINGSFLAEDLIDELSVLVAPIADGSIGTPSLFDAGEGRGPARHLKLVSCEPRKSDMLWLKYKVRKSESKR
>Mature_235_residues
MRRAKRPYVICHMVPSIDGRIVTRNWKLSSRALSEYERTAETFDADGWMIGRISMEPYAGKAKVPVRKSGQPIPRTDFIA
RRDAESYAIALDPTGKLTWKFGSIDDEHVITILTEQVSDDYLAFLQSKGVSYLFGGKTELNLTRVLEKLRKDFGIKRLLL
EGGGKINGSFLAEDLIDELSVLVAPIADGSIGTPSLFDAGEGRGPARHLKLVSCEPRKSDMLWLKYKVRKSESKR

Specific function: Unknown

COG id: COG1985

COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26349; Mature: 26349

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAKRPYVICHMVPSIDGRIVTRNWKLSSRALSEYERTAETFDADGWMIGRISMEPYAG
CCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
KAKVPVRKSGQPIPRTDFIARRDAESYAIALDPTGKLTWKFGSIDDEHVITILTEQVSDD
CCCCCCCCCCCCCCCCCHHECCCCCCEEEEECCCCEEEEEECCCCCCCEEEEEEHHHCHH
YLAFLQSKGVSYLFGGKTELNLTRVLEKLRKDFGIKRLLLEGGGKINGSFLAEDLIDELS
HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEECCCCEECHHHHHHHHHHHHH
VLVAPIADGSIGTPSLFDAGEGRGPARHLKLVSCEPRKSDMLWLKYKVRKSESKR
HHEEECCCCCCCCCCCCCCCCCCCCHHEEEEEECCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MRRAKRPYVICHMVPSIDGRIVTRNWKLSSRALSEYERTAETFDADGWMIGRISMEPYAG
CCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
KAKVPVRKSGQPIPRTDFIARRDAESYAIALDPTGKLTWKFGSIDDEHVITILTEQVSDD
CCCCCCCCCCCCCCCCCHHECCCCCCEEEEECCCCEEEEEECCCCCCCEEEEEEHHHCHH
YLAFLQSKGVSYLFGGKTELNLTRVLEKLRKDFGIKRLLLEGGGKINGSFLAEDLIDELS
HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEECCCCEECHHHHHHHHHHHHH
VLVAPIADGSIGTPSLFDAGEGRGPARHLKLVSCEPRKSDMLWLKYKVRKSESKR
HHEEECCCCCCCCCCCCCCCCCCCCHHEEEEEECCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA