Click here to switch to the map view.

The map label for this gene is rimK [H]

Identifier: 108761153

GI number: 108761153

Start: 413402

End: 414391

Strand: Reverse

Name: rimK [H]

Synonym: MXAN_0352

Alternate gene names: 108761153

Gene position: 414391-413402 (Counterclockwise)

Preceding gene: 108757309

Following gene: 108757362

Centisome position: 4.53

GC content: 69.8

Gene sequence:

>990_bases
ATGTCTCCGCGCAAAGTGAAGCCGAAGAAGGTCCCGGTCCTGCCCGGGTCCCAGGCACCCGACCGTCCCGAACGGGCCCC
ACGGCGAGGGCACGCGAAGAAGACGGTTGTCATCCTGTCCCGCAAGCGCGCGCTGTACTCCACACGGAGGCTGGTGGCCG
CCATCCGCGCGCGGGGCCACCGCCCGTTGGTGCTGGACACGCTGCGTTGCTGCCTGCTGCTCGCGCAAGACGCACCGCGC
ATGACGTATCGCGGCGTGGAGGTGCGTGGCGTGGACGTGGTGGTGCCGCGCATCGGCGCGTCCATCACCGCCTATGGCCT
GGCGGTGGTGAACCACTTCGAGATGATGGGCGTGCCCGTCCTCAACCCGCCCACGTCCATCGCGCGCAGCCGCGACAAGC
TGCGCGCGCTGCAGTACCTGTCGCGCTCCGGGCTGGACATCCCCCGCACCGTCATGGCGCACGACCGCAGCAACGTGCGC
CGGCTGGTGGAGGAGGTCAACGGGCTGCCCGTCATCATCAAACTCATCAAGGGCACCCAGGGCGTGGGCGTGATGATTGC
CCACACGCTGCCGGAGGTGCAGACCATCCTCGACACCTTCTGGGACCTGGGACAGGAAATCGTGCTCCAGGAGTTCGTCG
CGGAGAGCGAGGGACGGGACGTGCGGGCCCTCGTCGTGGGTGACCGCGTGGTGGGCGCCATGCGGCGCAAGGCCAAGTCC
GGCGAGTTCCGCTCCAACATCCACCGCGGCGGCGAAGGGCAGGCAATCGAGCTGACCGCGCCCTACACGGAAGCAGCCGT
GCGGGCCGCGCGTGTCGTCGGGTTGGAGGTCGCGGGCGTGGACATGCTGGAGGGCCACGCCGGCCCCCGGCTGATGGAAA
TCAACTCCAGCCCGGGCTTCGAGGGCCTGGAGCGCGCCACGGGCATGGACATCGCGGGGGCCATCATCGACCACGCGCTG
AAGTACGCCGAGGCGAAGCGCGCCGGGTGA

Upstream 100 bases:

>100_bases
GGTGCAGAGGGGGAGCACTCATCTGCGCACGAGGATAGCAAAGGCCCCCCACGAGGCCCGCCCCTCGCGGGCGTCCGTGC
TAGGCTCTCGTGCCCCGCCC

Downstream 100 bases:

>100_bases
GCGTGAACCCGGGTCACGTGAGGTTGCTCGCCTGCTTTCGAGCAGACACACAGCCGGGGCAAGGCACCTTGCATGCTCCT
CAGGAACACAGGAATGCCTC

Product: ribosomal protein S6 modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSPRKVKPKKVPVLPGSQAPDRPERAPRRGHAKKTVVILSRKRALYSTRRLVAAIRARGHRPLVLDTLRCCLLLAQDAPR
MTYRGVEVRGVDVVVPRIGASITAYGLAVVNHFEMMGVPVLNPPTSIARSRDKLRALQYLSRSGLDIPRTVMAHDRSNVR
RLVEEVNGLPVIIKLIKGTQGVGVMIAHTLPEVQTILDTFWDLGQEIVLQEFVAESEGRDVRALVVGDRVVGAMRRKAKS
GEFRSNIHRGGEGQAIELTAPYTEAAVRAARVVGLEVAGVDMLEGHAGPRLMEINSSPGFEGLERATGMDIAGAIIDHAL
KYAEAKRAG

Sequences:

>Translated_329_residues
MSPRKVKPKKVPVLPGSQAPDRPERAPRRGHAKKTVVILSRKRALYSTRRLVAAIRARGHRPLVLDTLRCCLLLAQDAPR
MTYRGVEVRGVDVVVPRIGASITAYGLAVVNHFEMMGVPVLNPPTSIARSRDKLRALQYLSRSGLDIPRTVMAHDRSNVR
RLVEEVNGLPVIIKLIKGTQGVGVMIAHTLPEVQTILDTFWDLGQEIVLQEFVAESEGRDVRALVVGDRVVGAMRRKAKS
GEFRSNIHRGGEGQAIELTAPYTEAAVRAARVVGLEVAGVDMLEGHAGPRLMEINSSPGFEGLERATGMDIAGAIIDHAL
KYAEAKRAG
>Mature_328_residues
SPRKVKPKKVPVLPGSQAPDRPERAPRRGHAKKTVVILSRKRALYSTRRLVAAIRARGHRPLVLDTLRCCLLLAQDAPRM
TYRGVEVRGVDVVVPRIGASITAYGLAVVNHFEMMGVPVLNPPTSIARSRDKLRALQYLSRSGLDIPRTVMAHDRSNVRR
LVEEVNGLPVIIKLIKGTQGVGVMIAHTLPEVQTILDTFWDLGQEIVLQEFVAESEGRDVRALVVGDRVVGAMRRKAKSG
EFRSNIHRGGEGQAIELTAPYTEAAVRAARVVGLEVAGVDMLEGHAGPRLMEINSSPGFEGLERATGMDIAGAIIDHALK
YAEAKRAG

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG0189

COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

Organism=Homo sapiens, GI164663810, Length=231, Percent_Identity=27.7056277056277, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI134254462, Length=219, Percent_Identity=31.0502283105023, Blast_Score=97, Evalue=3e-20,
Organism=Escherichia coli, GI1787076, Length=281, Percent_Identity=45.9074733096085, Blast_Score=265, Evalue=4e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR004666 [H]

Pfam domain/function: PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 35877; Mature: 35746

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRKVKPKKVPVLPGSQAPDRPERAPRRGHAKKTVVILSRKRALYSTRRLVAAIRARGH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCC
RPLVLDTLRCCLLLAQDAPRMTYRGVEVRGVDVVVPRIGASITAYGLAVVNHFEMMGVPV
CCHHHHHHHHHHHHHCCCCCCEECCEEEECEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
LNPPTSIARSRDKLRALQYLSRSGLDIPRTVMAHDRSNVRRLVEEVNGLPVIIKLIKGTQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHCCCEEEHHHHCCCC
GVGVMIAHTLPEVQTILDTFWDLGQEIVLQEFVAESEGRDVRALVVGDRVVGAMRRKAKS
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCC
GEFRSNIHRGGEGQAIELTAPYTEAAVRAARVVGLEVAGVDMLEGHAGPRLMEINSSPGF
CHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHEEEECCCHHHCCCCCCEEEEECCCCCC
EGLERATGMDIAGAIIDHALKYAEAKRAG
CHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPRKVKPKKVPVLPGSQAPDRPERAPRRGHAKKTVVILSRKRALYSTRRLVAAIRARGH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCC
RPLVLDTLRCCLLLAQDAPRMTYRGVEVRGVDVVVPRIGASITAYGLAVVNHFEMMGVPV
CCHHHHHHHHHHHHHCCCCCCEECCEEEECEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
LNPPTSIARSRDKLRALQYLSRSGLDIPRTVMAHDRSNVRRLVEEVNGLPVIIKLIKGTQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHCCCEEEHHHHCCCC
GVGVMIAHTLPEVQTILDTFWDLGQEIVLQEFVAESEGRDVRALVVGDRVVGAMRRKAKS
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCC
GEFRSNIHRGGEGQAIELTAPYTEAAVRAARVVGLEVAGVDMLEGHAGPRLMEINSSPGF
CHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHEEEECCCHHHCCCCCCEEEEECCCCCC
EGLERATGMDIAGAIIDHALKYAEAKRAG
CHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Glu; Ribosomal protein S6 [C]

Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]

General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA