| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is kynA [H]
Identifier: 108761141
GI number: 108761141
Start: 832589
End: 833437
Strand: Reverse
Name: kynA [H]
Synonym: MXAN_0731
Alternate gene names: 108761141
Gene position: 833437-832589 (Counterclockwise)
Preceding gene: 108759656
Following gene: 108758309
Centisome position: 9.12
GC content: 69.02
Gene sequence:
>849_bases ATGAGCGCGTCCATCGATTACAGTCACGCCGAAAAACTACGACTCGAACTGGCAGAACCCCTCTTCAACCCCCTCTTGAA GAAGTGGGTGGGCAAGGGCGAGCTCGATTACGAGGTCTACCTCAAGACGCCCACGCTGCTGTCGCTGCAGGCGCCGGACG GCGAGCGCGTCGCCCACGACGAGCTGATGTTCCAGGTGGTGCACCAGGCGCAGGAGCTCTGGCTGAAGCTGGCCTCGCGC GAGGCGGTGGAAGTCGTAGCCGAGCTGGACCGGGACGCGCTGTGGGCCGCCTCGTCGCGGCTGGAGCGCATCTGCCGGGT GCTCCAGGCGGTGAAGCAGGAGCTGGCCATCCTGGAGACGATGACGCCGGACACCTACCAGGTCATCCGGCGCAGCCTGG GCAACGGCAGCGGCCAGGAGTCCCCCGGCTACAACATGCTGCGGCGGGTAGCGCTGGGGCTGGAAGGCGCCCTGGACCGG CTGCTCGCGCGGCGCGGGCTGGCGCTGGCGTCCGTGTACACCTCGGGTGGCCCGGACGACTTGAAGCGAATCTGCGAGCA GTTGGTGGACATGGACGAGGCCTTCCAGGGCTGGCTCCATGCGCACTTCCAGCTGGTGCGCCGCACCATTGGCGTGGACC GCACCGTGAAAGCGCTGGACGGCCTGCCCACGCAGGTGCTCGCGGGGCGGATGATGCTGCCGCTGTTCCGCCAGCTCTGG GACGTGCGGCTGGAGCTGACGTCCGGGTGGCAGCGCGAGGGCGGCATCGCCCCGGGTGCCAACCGGGCCCCTCCAGGCGG CGGCTGCCCCATGGCGCACGCGGCCAGAATGCAGGTGGAACAGCCATGA
Upstream 100 bases:
>100_bases GCTCCCACCAGCTGAACGCCGGATGACATGCCCGCGGGTCCCGTTGGGACGGGGCCCGCGATTCCACACCTTCCGAGCTC CCCCCACTCAGGAGGGCCGT
Downstream 100 bases:
>100_bases AGGGGGAGGCCACGGCCCTGGCTTCCACCCCTCGCGCACTGCTTCACCTGCTGTACAACGGCGCCCGCGCCGTGGACGTC CTGGAGGCCTCCCTGGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSASIDYSHAEKLRLELAEPLFNPLLKKWVGKGELDYEVYLKTPTLLSLQAPDGERVAHDELMFQVVHQAQELWLKLASR EAVEVVAELDRDALWAASSRLERICRVLQAVKQELAILETMTPDTYQVIRRSLGNGSGQESPGYNMLRRVALGLEGALDR LLARRGLALASVYTSGGPDDLKRICEQLVDMDEAFQGWLHAHFQLVRRTIGVDRTVKALDGLPTQVLAGRMMLPLFRQLW DVRLELTSGWQREGGIAPGANRAPPGGGCPMAHAARMQVEQP
Sequences:
>Translated_282_residues MSASIDYSHAEKLRLELAEPLFNPLLKKWVGKGELDYEVYLKTPTLLSLQAPDGERVAHDELMFQVVHQAQELWLKLASR EAVEVVAELDRDALWAASSRLERICRVLQAVKQELAILETMTPDTYQVIRRSLGNGSGQESPGYNMLRRVALGLEGALDR LLARRGLALASVYTSGGPDDLKRICEQLVDMDEAFQGWLHAHFQLVRRTIGVDRTVKALDGLPTQVLAGRMMLPLFRQLW DVRLELTSGWQREGGIAPGANRAPPGGGCPMAHAARMQVEQP >Mature_281_residues SASIDYSHAEKLRLELAEPLFNPLLKKWVGKGELDYEVYLKTPTLLSLQAPDGERVAHDELMFQVVHQAQELWLKLASRE AVEVVAELDRDALWAASSRLERICRVLQAVKQELAILETMTPDTYQVIRRSLGNGSGQESPGYNMLRRVALGLEGALDRL LARRGLALASVYTSGGPDDLKRICEQLVDMDEAFQGWLHAHFQLVRRTIGVDRTVKALDGLPTQVLAGRMMLPLFRQLWD VRLELTSGWQREGGIAPGANRAPPGGGCPMAHAARMQVEQP
Specific function: Catalyzes the oxidative cleavage of the L-tryptophan (L- Trp) pyrrole ring [H]
COG id: COG3483
COG function: function code E; Tryptophan 2,3-dioxygenase (vermilion)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tryptophan 2,3-dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004981 [H]
Pfam domain/function: PF03301 Trp_dioxygenase [H]
EC number: =1.13.11.11 [H]
Molecular weight: Translated: 31414; Mature: 31282
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASIDYSHAEKLRLELAEPLFNPLLKKWVGKGELDYEVYLKTPTLLSLQAPDGERVAHD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCHHHHH ELMFQVVHQAQELWLKLASREAVEVVAELDRDALWAASSRLERICRVLQAVKQELAILET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTPDTYQVIRRSLGNGSGQESPGYNMLRRVALGLEGALDRLLARRGLALASVYTSGGPDD CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHH LKRICEQLVDMDEAFQGWLHAHFQLVRRTIGVDRTVKALDGLPTQVLAGRMMLPLFRQLW HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH DVRLELTSGWQREGGIAPGANRAPPGGGCPMAHAARMQVEQP HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure SASIDYSHAEKLRLELAEPLFNPLLKKWVGKGELDYEVYLKTPTLLSLQAPDGERVAHD CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCHHHHH ELMFQVVHQAQELWLKLASREAVEVVAELDRDALWAASSRLERICRVLQAVKQELAILET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTPDTYQVIRRSLGNGSGQESPGYNMLRRVALGLEGALDRLLARRGLALASVYTSGGPDD CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHH LKRICEQLVDMDEAFQGWLHAHFQLVRRTIGVDRTVKALDGLPTQVLAGRMMLPLFRQLW HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH DVRLELTSGWQREGGIAPGANRAPPGGGCPMAHAARMQVEQP HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]