| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is mhpC [H]
Identifier: 108761042
GI number: 108761042
Start: 267544
End: 268734
Strand: Direct
Name: mhpC [H]
Synonym: MXAN_0220
Alternate gene names: 108761042
Gene position: 267544-268734 (Clockwise)
Preceding gene: 108757512
Following gene: 108758562
Centisome position: 2.93
GC content: 69.86
Gene sequence:
>1191_bases ATGAGCACCTCCCGCGCATTCACGGCCCTGCTCCTCGCGGCGGGGCTCTCCTCCGCCGGTTGCGTGCGCTCGTACGCGCA CCAGCCCGCGCTCTCCTTCCAGGATTTGGACTACACCTCCGAGGGCTCGAAGCAGCCCTGGCCGGTGAAACGGATTCCGC TTCCGCGCACCGCGAATCAGTACGGCATGGCCGTGGTGCCACAGATTGCCTACGTCGACATGCCCGGCAGCGGCCCGGAC GCGAAGGCCGTCGTCTTCATCCACGGCCTGGGTTCGTACCTGAAGTTCTGGCGGGCGCAGCTGGACGCCTTCCAGAAGCA GGGCTACCGCGTCATCGCGGTGGACCTGCCCGGCTACGGCAAGTCCGACAAGCCCGGCACCTTCCCGTACACCATGGAGG CCATGGCGGACGCGGTGCTGGAGTTGGTGGACGGCCTGGGCCTGGACAAGCCCGTGCTCGCCGGTCACTCCATGGGCGGG CAGACGTCGCTCTCCTTCGCCATCCGCTACCCGGAGTCGCTGAGCGGGCTGGTGCTGGCGTCGCCCGCCGGCTTCGAGAA GTTCAGCTGGCGGGAGAAGGAGTGGTTCGCGCGGGCGATGAGCTCCGAGTTCATCAAGTCCGCGCCGGAGGCCAGCATCT GGGGCAGCGTGCGCCAGGCCAACTTCATGCACTGGCGGCCGGAGTTGGAGTGGCTGATTGAGGAGCGCGTGCGGCTGGCG AAGTCGCCCGAGTTCGACGCCTACGCCTACGCCAACGTGCGCACGGTGCGAGGCCTGTCCCACAACGACTTCGTGCGCGA CAACCTGCACCGCGTCACCGTGCCCACCGTCATCATCTACGGCACGGATGACCGGCTCATCCCCAGCCCCTTCCTCCACG GCGGAGAGACGCGCGGCATCATGGAGTACGGCGCGTCCCACATTCCCGGCGCGAAGCTGGTGGCGCTGGAGGGCTGTGGG CACACCGTGCAGCTCGACTGTGCGGAGCGCTTCAACGAGGCGGCCTTCGCCTTCGTCCGTGACGCGGCGGCGGGGCGCAT CGAGGTGCCGTCCGCTCCCGCGAAGGAGGAGGCGCCGCGGCCGGAGTCTCCTCCCGCGCCGGCGTCCGAGCCGCTCACGC CGGAGAGCCTGCCTCCGCCCACGCCGGGCCAGGAAGGCGAGCCGACGCCGGGCGTGCTGCCCCAGCCGTAG
Upstream 100 bases:
>100_bases CGGGCTACCTGTTCCGGGGCAGCTTCTACGACGGCTCGCCCACCATCCGGACCAATCCCTTCTCCGTCTTCACCACCTTC ACCTGGTACGCGTTCTGACC
Downstream 100 bases:
>100_bases TGGGGTGGTGAGCCGGTCCACCTCCACCCTTTCGCGAGGGTGGAGGTGCCGGGTGCGGATGACTACGGGATGGTGTGGTT GACCACCATGTCGTACTGAA
Product: alpha/beta fold family hydrolase
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSTSRAFTALLLAAGLSSAGCVRSYAHQPALSFQDLDYTSEGSKQPWPVKRIPLPRTANQYGMAVVPQIAYVDMPGSGPD AKAVVFIHGLGSYLKFWRAQLDAFQKQGYRVIAVDLPGYGKSDKPGTFPYTMEAMADAVLELVDGLGLDKPVLAGHSMGG QTSLSFAIRYPESLSGLVLASPAGFEKFSWREKEWFARAMSSEFIKSAPEASIWGSVRQANFMHWRPELEWLIEERVRLA KSPEFDAYAYANVRTVRGLSHNDFVRDNLHRVTVPTVIIYGTDDRLIPSPFLHGGETRGIMEYGASHIPGAKLVALEGCG HTVQLDCAERFNEAAFAFVRDAAAGRIEVPSAPAKEEAPRPESPPAPASEPLTPESLPPPTPGQEGEPTPGVLPQP
Sequences:
>Translated_396_residues MSTSRAFTALLLAAGLSSAGCVRSYAHQPALSFQDLDYTSEGSKQPWPVKRIPLPRTANQYGMAVVPQIAYVDMPGSGPD AKAVVFIHGLGSYLKFWRAQLDAFQKQGYRVIAVDLPGYGKSDKPGTFPYTMEAMADAVLELVDGLGLDKPVLAGHSMGG QTSLSFAIRYPESLSGLVLASPAGFEKFSWREKEWFARAMSSEFIKSAPEASIWGSVRQANFMHWRPELEWLIEERVRLA KSPEFDAYAYANVRTVRGLSHNDFVRDNLHRVTVPTVIIYGTDDRLIPSPFLHGGETRGIMEYGASHIPGAKLVALEGCG HTVQLDCAERFNEAAFAFVRDAAAGRIEVPSAPAKEEAPRPESPPAPASEPLTPESLPPPTPGQEGEPTPGVLPQP >Mature_395_residues STSRAFTALLLAAGLSSAGCVRSYAHQPALSFQDLDYTSEGSKQPWPVKRIPLPRTANQYGMAVVPQIAYVDMPGSGPDA KAVVFIHGLGSYLKFWRAQLDAFQKQGYRVIAVDLPGYGKSDKPGTFPYTMEAMADAVLELVDGLGLDKPVLAGHSMGGQ TSLSFAIRYPESLSGLVLASPAGFEKFSWREKEWFARAMSSEFIKSAPEASIWGSVRQANFMHWRPELEWLIEERVRLAK SPEFDAYAYANVRTVRGLSHNDFVRDNLHRVTVPTVIIYGTDDRLIPSPFLHGGETRGIMEYGASHIPGAKLVALEGCGH TVQLDCAERFNEAAFAFVRDAAAGRIEVPSAPAKEEAPRPESPPAPASEPLTPESLPPPTPGQEGEPTPGVLPQP
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mhpC alpha/beta hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI27597073, Length=133, Percent_Identity=35.3383458646617, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI189027141, Length=263, Percent_Identity=24.7148288973384, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI218777837, Length=294, Percent_Identity=23.469387755102, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI218777840, Length=285, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI13376164, Length=285, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI87081721, Length=291, Percent_Identity=26.4604810996564, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787244, Length=238, Percent_Identity=26.890756302521, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25146278, Length=297, Percent_Identity=30.3030303030303, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI32566936, Length=314, Percent_Identity=27.3885350318471, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17558492, Length=314, Percent_Identity=27.3885350318471, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17554012, Length=139, Percent_Identity=33.0935251798561, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24586387, Length=331, Percent_Identity=24.4712990936556, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24586391, Length=331, Percent_Identity=24.4712990936556, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24586389, Length=331, Percent_Identity=24.4712990936556, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24586385, Length=331, Percent_Identity=24.4712990936556, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 43052; Mature: 42921
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00380 RHODANESE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSRAFTALLLAAGLSSAGCVRSYAHQPALSFQDLDYTSEGSKQPWPVKRIPLPRTANQ CCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YGMAVVPQIAYVDMPGSGPDAKAVVFIHGLGSYLKFWRAQLDAFQKQGYRVIAVDLPGYG CCCEEECEEEEEECCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC KSDKPGTFPYTMEAMADAVLELVDGLGLDKPVLAGHSMGGQTSLSFAIRYPESLSGLVLA CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCEEEE SPAGFEKFSWREKEWFARAMSSEFIKSAPEASIWGSVRQANFMHWRPELEWLIEERVRLA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCHHHHHHHHHHHHHH KSPEFDAYAYANVRTVRGLSHNDFVRDNLHRVTVPTVIIYGTDDRLIPSPFLHGGETRGI CCCCCCEEEEECCCEECCCCCCCHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCH MEYGASHIPGAKLVALEGCGHTVQLDCAERFNEAAFAFVRDAAAGRIEVPSAPAKEEAPR HHHCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC PESPPAPASEPLTPESLPPPTPGQEGEPTPGVLPQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STSRAFTALLLAAGLSSAGCVRSYAHQPALSFQDLDYTSEGSKQPWPVKRIPLPRTANQ CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YGMAVVPQIAYVDMPGSGPDAKAVVFIHGLGSYLKFWRAQLDAFQKQGYRVIAVDLPGYG CCCEEECEEEEEECCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC KSDKPGTFPYTMEAMADAVLELVDGLGLDKPVLAGHSMGGQTSLSFAIRYPESLSGLVLA CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCEEEE SPAGFEKFSWREKEWFARAMSSEFIKSAPEASIWGSVRQANFMHWRPELEWLIEERVRLA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCHHHHHHHHHHHHHH KSPEFDAYAYANVRTVRGLSHNDFVRDNLHRVTVPTVIIYGTDDRLIPSPFLHGGETRGI CCCCCCEEEEECCCEECCCCCCCHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCH MEYGASHIPGAKLVALEGCGHTVQLDCAERFNEAAFAFVRDAAAGRIEVPSAPAKEEAPR HHHCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC PESPPAPASEPLTPESLPPPTPGQEGEPTPGVLPQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA