| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is gsiB [H]
Identifier: 108761036
GI number: 108761036
Start: 4628841
End: 4629302
Strand: Reverse
Name: gsiB [H]
Synonym: MXAN_3850
Alternate gene names: 108761036
Gene position: 4629302-4628841 (Counterclockwise)
Preceding gene: 108764022
Following gene: 108758684
Centisome position: 50.65
GC content: 69.7
Gene sequence:
>462_bases ATGTCGGACAAGGACAACAAGGGCAGCATGACGGTGGCCGAAGCGGGCCGGAAGGGTGGCGAGACGGTCCGGAACGAACG CGGTCGCGAGTTCTACGAGACGATCGGCCGCAAGGGCGGCGCCACGGTGAAGGCCGAGCGCGGTCGCTCCTTCTACGAGG AGATTGGCCGCAAGGGCGGCGAGACGGTGAAGGCCGAGCGCGGCGCCAAGTTCTACGAGGAGATCGGCAAGAAGGGTGGC GACAGGGTGAAGGCCACCCGGGGGCCGAACTTCTACGAGGAGATTGGCCGCAAGGGTGGGCAGAAGGTGAAGAAGCTCAT CGAAGAGGGCAAGCGGGCCGCGCGGGCCGCCATGGCGGCGCAGGAGGGCGCGGCAGGTGCTCCGCCCCAGGAGGGTGCGG CGCCGGCGCCATCCACCCCCCCTTCTTCCGGAGAGCCGGCGGGGCCGGGCCAGAACGAGTAG
Upstream 100 bases:
>100_bases GGTGTACGGAGCTTGCTTGCATCGGGGCGCTTCCGTCCCAAGGTTTCAGGCAAGGGGCACCAAGGCGAGGGCTGGGGTAG TCACGAGAGGAGATAGGGAA
Downstream 100 bases:
>100_bases CACCGCGAGCGTGGCGCCAGACTCGCGGACCGACTAAGAGGGCCGCGTGTACTTGGTCATCACGTTCCTCGAACAGTTGG AAGGAACCGAGCGGGCCATC
Product: putative general stress protein GsiB
Products: NA
Alternate protein names: General stress protein B [H]
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSDKDNKGSMTVAEAGRKGGETVRNERGREFYETIGRKGGATVKAERGRSFYEEIGRKGGETVKAERGAKFYEEIGKKGG DRVKATRGPNFYEEIGRKGGQKVKKLIEEGKRAARAAMAAQEGAAGAPPQEGAAPAPSTPPSSGEPAGPGQNE
Sequences:
>Translated_153_residues MSDKDNKGSMTVAEAGRKGGETVRNERGREFYETIGRKGGATVKAERGRSFYEEIGRKGGETVKAERGAKFYEEIGKKGG DRVKATRGPNFYEEIGRKGGQKVKKLIEEGKRAARAAMAAQEGAAGAPPQEGAAPAPSTPPSSGEPAGPGQNE >Mature_152_residues SDKDNKGSMTVAEAGRKGGETVRNERGREFYETIGRKGGATVKAERGRSFYEEIGRKGGETVKAERGAKFYEEIGKKGGD RVKATRGPNFYEEIGRKGGQKVKKLIEEGKRAARAAMAAQEGAAGAPPQEGAAPAPSTPPSSGEPAGPGQNE
Specific function: Involved in an adaptative response to nutrient deprivation other than sporulation [H]
COG id: COG3729
COG function: function code R; General stress protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019626 - InterPro: IPR000389 [H]
Pfam domain/function: PF10685 KGG; PF00477 LEA_5 [H]
EC number: NA
Molecular weight: Translated: 16127; Mature: 15996
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKDNKGSMTVAEAGRKGGETVRNERGREFYETIGRKGGATVKAERGRSFYEEIGRKGG CCCCCCCCCCHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCCEEHHHCHHHHHHHHHCCC ETVKAERGAKFYEEIGKKGGDRVKATRGPNFYEEIGRKGGQKVKKLIEEGKRAARAAMAA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH QEGAAGAPPQEGAAPAPSTPPSSGEPAGPGQNE HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDKDNKGSMTVAEAGRKGGETVRNERGREFYETIGRKGGATVKAERGRSFYEEIGRKGG CCCCCCCCCHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCCEEHHHCHHHHHHHHHCCC ETVKAERGAKFYEEIGKKGGDRVKATRGPNFYEEIGRKGGQKVKKLIEEGKRAARAAMAA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH QEGAAGAPPQEGAAPAPSTPPSSGEPAGPGQNE HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1378051; 9384377; 8012595 [H]