| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is topB [H]
Identifier: 108761008
GI number: 108761008
Start: 610214
End: 614896
Strand: Direct
Name: topB [H]
Synonym: MXAN_0535
Alternate gene names: 108761008
Gene position: 610214-614896 (Clockwise)
Preceding gene: 108758760
Following gene: 108763411
Centisome position: 6.68
GC content: 71.86
Gene sequence:
>4683_bases GTGCTGGCGGAGAAGCCCTCGGTGGCGCGCGACATCGCGCGGGTGCTGGGGGCGAACGAGCGCGGTGAGGGCTGGCTGCG CGGCAATGGCTACGTGGTGACGTGGGCCATCGGGCACCTGGTGGGCCTGGCGCAGCCCCATGAGATTCGCGCGGACTGGA AGAAGTGGAGCCGCGCGCTGCTGCCCATGCTCCCGGCGGACTGGCCGCTGGTCGTCTCCAAGGAGACGCGCAGCCAGTTC GAGGTGGTGAAGCAGGTGCTCAACGCGCCGGAGGTGTCCTCGGTGGTGTGCGCAACGGACGCGGGGCGCGAGGGCGAGCT TATCTTCCGGTACATCTACGACGCGGCGAAGTGCCGCAAGCCGGTACAGCGGCTGTGGGTGTCGTCGCTGACGGAGCGGG CCATCCAGGACGGCTTCCGCCGGCTCGCGGACGGCCGTGAATACGAAGCGCTGGCCGCCGCGGCCATGGGGCGCAGCCGG GCGGACTGGCTGGTGGGGATGAACCTGTCGCGCCTGTACACGCTGGCGCACGGGGGCCATGGAGAGATGCTGAGCGTGGG CCGGGTGCAGACGCCCACGCTGGCCATGGTGGTGGAGCGCGAGTTGGCCATCCGCGACTTCGTGCCGCGTGACTACCTGG AGCTCGTGGCCACCTTCGCGCCCAGGGCGAAGGGGGTTCCGCCGGACGCGCTGTACAAGGGCACGTGGTTCCGCTCGGGG CCGGATGGCAAGCCCGTGGCGCCCCCGGGCTTCGAGGGCGTGCGCGAGGCGCGGCGGCTGGATGCGAACGGCGTGGAGGC GCAGGCCATCATCGACCGGGTGCGCGCCGGGCGGGCCATCATCGAATCGCTGGAGTCGGAGGAGAAGAGGATGGCGCCTC CGCTCCTCTACGACTTGACGGAGTTGCAGCGGCACGCCAACCGGCTCCATGGCTTCAGCGCGCAGCGCACGCTGGAGGTG GCGCAGGCGCTCTACGAGAAGCACAAGCTGTTGAGCTATCCGCGCACCGCCAGCCGGCACCTGTCACGCACCGTGGCGGA CACGCTGCCGGAGGTGGTGAACGCCATTCGCGGGCCCTACGAGGAGGACCTGGCCGTCGGTACGGGGGCTCGGGCGCTGG GCAAGCGCTATGTGGATGACGCGAAGGTGACGGACCACCACGCCATCATCCCCACGCCCACGGCGCCGGGCGGGGTGCGG CTGTCTCCGGACGAGCAGCGCGTCTATGACCTGGTGTGCCGGCGTCTGCTCCAGGCGTGGCACGAGGACCACGTCTGGCG GGTCACCACGGTCATCACCGCGGTGACGTCGGCAGGGGCGCCGCCCGTGGTGGACCGCTTCCAGAGCACGGGCACCCAGG TGGAGCAGGTGGGCTGGAAGGTGCTGGACATTGGCGGCGGACAGAAGGCGCCGCGGCTGAAGTCGGAGGGGCGCAAGGGC GAGGACGCGGAGCGGGAGCCGGAGGACGAGCCCCAGACGCTGCCGTCGGGGTTGGCGCGCGCGCAGCCGCAGTCCGTGGA GGACGTGGAGGCGGTGAAGAAGCGCACGCGTCCGCCTCCCCGCTTCACGGATGCGACGCTGCTGACGGCCATGGAGTCGG CGGGGCGGGCGTTGGATGAGAAGGAGCTCGCGGACGCGATGCGCGAGACGGGCCTGGGGACTCCCGCCACCCGCGCGGCC ATCATCGAGGTGCTGCTGGACCGCGAGTACCTGCGCCGCCGGGGCAAGGTGATGGAGGCCACGGAGAAGGGCATCCATCT CATCCAGGTGGTGCACCCGGATGTGAAGACGCCGGCCATGACGGGCCAGTGGGAGGCGTGGCTCCAGCGCATCGAGCGCG GCGAAGGCCAGCTCGATGAGTTCATCCGTGGCATCGAGGCGTATGTCATCGAGGTGGTGGGCCATGGCGCCACCGCGCCG CAACGGCCTCCGCGCAACGAGGTGTTGGGGGCTCCACCTGGAGCAGGTTGGGGGCAGGGCGGCGCGGCGCAGGTGGCGAG CGAGGGCGCGGCCGCGGCGCACGGCGCTGGCGCGGGAGCGCGTGGCCCTGGCGGGCAGGGGGCGTTCGCGGAGTCCTCTG CTGAGCGTTTCGGGGATGCTTCGGCGGGGGGGGCGGGGCGTGGCCGGCAGGGGGCGTTCACGGAGGCTTCTGCCGAGCGC TTCGCGGATGCCGCGCCGGGTGTGCAGGGACAGGGACGCCCGGGCGCGCTCTCGGAGGCTTCGGAGCCGCTCTTCGGGAC GCGGCGGAGCAGGACCTCGGGCTCCGTGGGTCGCTCGGAGCCTCATGGCGAGCCGCTGTCCTCCACCATGTCACCGGGCG GAGGCGCGGCCTCGCGTCTTCCTCGGGCGGACGGCACAGGCTGGAACGCCGGGGCCTGGGAGAACACGGGCGCTGCTCGC GCTCCAGTGAACCGTGCGAGGACCCCGGCGTCAGCCGCGTCCACCGGGCAGCGGCCGGAGCGCGTGCGGCGCGCACCGAC GGCGCCCGAGGCGCTGCGTCCGCTGCTGAAGGAGGCGTTCGGCTTCTCGGACTTCCGGCCGTATCAGGAGGCCGTGTGCC GCGCGGCCACGGCGGGAGAGGACCTGCTGCTCGTGATGCCCACGGGCGCGGGCAAGTCGCTCTGCTATCAGTTGCCGGGT CTGGCGCGCGCAGGCACCACGCTGGTGGTGAGTCCGCTCATCGCGCTGATGGAGGACCAGGTGGCGCGGCTCCAGTCGCT CGGCTTCGCGGCGGACCGCATCCACTCCGGAAGAGACCGGGCCATGTCGCGGCAGGTGTGCGCGGACTACCTGGAGGACC GGCTCGACTTCCTGTTCATCGCGCCCGAGCGGCTCGGCGTTCCGGGCTTCGTGGAGTTCCTGGCGCGCCGCACGCCCGCG CTCATCGCGGTGGACGAGGCCCACTGCATCTCCCAGTGGGGACACGACTTCCGCCCGGACTATCGACTCCTGGGCGCGCG TTTGCCCCTGCTGCGCCCCGCGCCCGTGGTGGCGCTCACCGCCACCGCCACGCCGGACGTGCAGCGGGACATCGTTCAGC AGCTCGGCCTGCAAGGCCCCGGGGGCAAGGCGCGCACCTTCATTCACGGCTTCCGCCGCACCAACATCGCCATCGAGGTG CGGGAGCTGAACCCCGGCGCGCGCGGCGACGCCATCCAGGGATTGCTCGAGGACGAGGAGAACCGGCCCGCGATTGTCTA CGCGGCCACGCGCAAGCACGCCGAGCAGCTCGCGGACCAGCTCGCGGGCGAGTTCCCCGCGGCCGCCTATCACGCGGGGC TCCAGCCTTCGGAGCGAGATCGGGTGCAGGCCGAGTTCCTCCGGGGCTCGCTGGAGGTCATCGTGGCCACCACGGCGTTC GGCATGGGCATCGACAAGGCGGACGTGCGCACCGTCATCCACGCGGCGCTCCCCGCCAGCCTGGAGGGCTACTACCAGGA GCTGGGCCGCGCGGGCCGCGATGGGAAGCCGTCGCGCGCGGTGCTGCTGCATTCGTACATCGACCGGCGCACGCACGAGT TCTTCCACCGGCGCGACTACCCGGAGGCGTACGTGCTGGAGCGGCTGTTCAAGTCCACGGCGCCGCAGCTCGAGCCCAAG GCCGTGCTCCAGGGCCGCGTGCGAGGAGACCCCGAGGTCTTCGACAAGGCACTGGAGCAGCTCTGGATTCACGGCGGCGT CGTCATGACGCCTGACGAGACGGTGATGCGCGGGAAGCCGGGCTGGTCCGCGTCGTACTCGGCCCAGCGCGATCGCAAAC TGCTGCACCTGGAGCAGATGGGGCGCTACGCGGAGGCCCATGGCTGCCGCATGAAGCAGCTCGTGGGGCACTTCGGTGAC ACCCAGGATTCGGGTGAGCCGTGCGGCCTGTGTGATGTCTGCGCGCCGGAGGACTGCGCCACGCTGCGCTTCGCCGAGCC GACCTCCGCGGAGCGGCACTGGCTGGAGCGCATCCTGGAGTCGCTCCAGGAGCGGGACGGACAGGCCACCGGAAGGCTCC ACCGCGAGTTGTTTGGAGAGTCCCTGCCACGGCGCGACTTCGAGCGACTGGTGGGCGGACTGGTTCGCGCCGGGCTGACG CGCTTGGAGGTGGACTCGTTCGACAAGGACGGGCAGGTCATTTCGTTCCAGCGTCTCGCCCTGACGGACGAGGGCCGGCG CACGCGCGCGGTGGACCCCCAGCGAGTGGTCCTGCCGTTGCCCCTGGAGAAGGCCGCGAAGCGCAAGCGGGGCAAGGGCG CGGAGAAGGGCACCGCGAAGCGGGCCACGGCCAAGAAACGCACGGTCCGCGCCAAGGCCGGGGCCGCGACGCGGCGCACG GCATCCGAATCCGATGAGGAAGACTCGCCGACGCACTGGCGCGCGAACGCTCCCTCGAAGAGCACCGCCGGGGCGCCACG TGCGTCCCGGAGCACGGGGGCTCCGAGTGGCTCCGCGTCAGGCCGCCGCGCCGCGGCCGAGCCTTCTCCGAAGATGGTGG AGGCCTTGAAGGCCTGGCGGCTCGCGGAGGCGCGCAAGCGGCGGGTGCCTGCCTTCCGCATCCTCACGGACCGGGTGCTG GAGGCCATCGCGTCGGCCTGTCCGGAGAATGGCTCGGAGTTGATGGCCATCCACGGGGTGGGGCCCTCCCTCACGGAGCG CTACGGCGCGCAGATTCTTTCCCTCGTGGCGCGCAGGAGCTGA
Upstream 100 bases:
>100_bases CATGAGGTGGGAAGAGATGGGCGAGACGCCCCGGGAGGACAGGCGCGGAGGCAGGGACGGCGGTGCGAAGGCGTCCTCCG GTCGCTCCTCCCTGCTGGCC
Downstream 100 bases:
>100_bases GCCCGGACGCCTCGCGGAAGGAGGCGTCCTTCCCACGAAGGGAAGGGCGCTTCCCTCCGCGCGCCACGGCGATTCCAGCG CAAGTCCGGGTGCGGGGCGC
Product: RecQ family DNA topoisomerase III/ATP-dependent DNA helicase
Products: NA
Alternate protein names: DNA topoisomerase III [H]
Number of amino acids: Translated: 1560; Mature: 1560
Protein sequence:
>1560_residues MLAEKPSVARDIARVLGANERGEGWLRGNGYVVTWAIGHLVGLAQPHEIRADWKKWSRALLPMLPADWPLVVSKETRSQF EVVKQVLNAPEVSSVVCATDAGREGELIFRYIYDAAKCRKPVQRLWVSSLTERAIQDGFRRLADGREYEALAAAAMGRSR ADWLVGMNLSRLYTLAHGGHGEMLSVGRVQTPTLAMVVERELAIRDFVPRDYLELVATFAPRAKGVPPDALYKGTWFRSG PDGKPVAPPGFEGVREARRLDANGVEAQAIIDRVRAGRAIIESLESEEKRMAPPLLYDLTELQRHANRLHGFSAQRTLEV AQALYEKHKLLSYPRTASRHLSRTVADTLPEVVNAIRGPYEEDLAVGTGARALGKRYVDDAKVTDHHAIIPTPTAPGGVR LSPDEQRVYDLVCRRLLQAWHEDHVWRVTTVITAVTSAGAPPVVDRFQSTGTQVEQVGWKVLDIGGGQKAPRLKSEGRKG EDAEREPEDEPQTLPSGLARAQPQSVEDVEAVKKRTRPPPRFTDATLLTAMESAGRALDEKELADAMRETGLGTPATRAA IIEVLLDREYLRRRGKVMEATEKGIHLIQVVHPDVKTPAMTGQWEAWLQRIERGEGQLDEFIRGIEAYVIEVVGHGATAP QRPPRNEVLGAPPGAGWGQGGAAQVASEGAAAAHGAGAGARGPGGQGAFAESSAERFGDASAGGAGRGRQGAFTEASAER FADAAPGVQGQGRPGALSEASEPLFGTRRSRTSGSVGRSEPHGEPLSSTMSPGGGAASRLPRADGTGWNAGAWENTGAAR APVNRARTPASAASTGQRPERVRRAPTAPEALRPLLKEAFGFSDFRPYQEAVCRAATAGEDLLLVMPTGAGKSLCYQLPG LARAGTTLVVSPLIALMEDQVARLQSLGFAADRIHSGRDRAMSRQVCADYLEDRLDFLFIAPERLGVPGFVEFLARRTPA LIAVDEAHCISQWGHDFRPDYRLLGARLPLLRPAPVVALTATATPDVQRDIVQQLGLQGPGGKARTFIHGFRRTNIAIEV RELNPGARGDAIQGLLEDEENRPAIVYAATRKHAEQLADQLAGEFPAAAYHAGLQPSERDRVQAEFLRGSLEVIVATTAF GMGIDKADVRTVIHAALPASLEGYYQELGRAGRDGKPSRAVLLHSYIDRRTHEFFHRRDYPEAYVLERLFKSTAPQLEPK AVLQGRVRGDPEVFDKALEQLWIHGGVVMTPDETVMRGKPGWSASYSAQRDRKLLHLEQMGRYAEAHGCRMKQLVGHFGD TQDSGEPCGLCDVCAPEDCATLRFAEPTSAERHWLERILESLQERDGQATGRLHRELFGESLPRRDFERLVGGLVRAGLT RLEVDSFDKDGQVISFQRLALTDEGRRTRAVDPQRVVLPLPLEKAAKRKRGKGAEKGTAKRATAKKRTVRAKAGAATRRT ASESDEEDSPTHWRANAPSKSTAGAPRASRSTGAPSGSASGRRAAAEPSPKMVEALKAWRLAEARKRRVPAFRILTDRVL EAIASACPENGSELMAIHGVGPSLTERYGAQILSLVARRS
Sequences:
>Translated_1560_residues MLAEKPSVARDIARVLGANERGEGWLRGNGYVVTWAIGHLVGLAQPHEIRADWKKWSRALLPMLPADWPLVVSKETRSQF EVVKQVLNAPEVSSVVCATDAGREGELIFRYIYDAAKCRKPVQRLWVSSLTERAIQDGFRRLADGREYEALAAAAMGRSR ADWLVGMNLSRLYTLAHGGHGEMLSVGRVQTPTLAMVVERELAIRDFVPRDYLELVATFAPRAKGVPPDALYKGTWFRSG PDGKPVAPPGFEGVREARRLDANGVEAQAIIDRVRAGRAIIESLESEEKRMAPPLLYDLTELQRHANRLHGFSAQRTLEV AQALYEKHKLLSYPRTASRHLSRTVADTLPEVVNAIRGPYEEDLAVGTGARALGKRYVDDAKVTDHHAIIPTPTAPGGVR LSPDEQRVYDLVCRRLLQAWHEDHVWRVTTVITAVTSAGAPPVVDRFQSTGTQVEQVGWKVLDIGGGQKAPRLKSEGRKG EDAEREPEDEPQTLPSGLARAQPQSVEDVEAVKKRTRPPPRFTDATLLTAMESAGRALDEKELADAMRETGLGTPATRAA IIEVLLDREYLRRRGKVMEATEKGIHLIQVVHPDVKTPAMTGQWEAWLQRIERGEGQLDEFIRGIEAYVIEVVGHGATAP QRPPRNEVLGAPPGAGWGQGGAAQVASEGAAAAHGAGAGARGPGGQGAFAESSAERFGDASAGGAGRGRQGAFTEASAER FADAAPGVQGQGRPGALSEASEPLFGTRRSRTSGSVGRSEPHGEPLSSTMSPGGGAASRLPRADGTGWNAGAWENTGAAR APVNRARTPASAASTGQRPERVRRAPTAPEALRPLLKEAFGFSDFRPYQEAVCRAATAGEDLLLVMPTGAGKSLCYQLPG LARAGTTLVVSPLIALMEDQVARLQSLGFAADRIHSGRDRAMSRQVCADYLEDRLDFLFIAPERLGVPGFVEFLARRTPA LIAVDEAHCISQWGHDFRPDYRLLGARLPLLRPAPVVALTATATPDVQRDIVQQLGLQGPGGKARTFIHGFRRTNIAIEV RELNPGARGDAIQGLLEDEENRPAIVYAATRKHAEQLADQLAGEFPAAAYHAGLQPSERDRVQAEFLRGSLEVIVATTAF GMGIDKADVRTVIHAALPASLEGYYQELGRAGRDGKPSRAVLLHSYIDRRTHEFFHRRDYPEAYVLERLFKSTAPQLEPK AVLQGRVRGDPEVFDKALEQLWIHGGVVMTPDETVMRGKPGWSASYSAQRDRKLLHLEQMGRYAEAHGCRMKQLVGHFGD TQDSGEPCGLCDVCAPEDCATLRFAEPTSAERHWLERILESLQERDGQATGRLHRELFGESLPRRDFERLVGGLVRAGLT RLEVDSFDKDGQVISFQRLALTDEGRRTRAVDPQRVVLPLPLEKAAKRKRGKGAEKGTAKRATAKKRTVRAKAGAATRRT ASESDEEDSPTHWRANAPSKSTAGAPRASRSTGAPSGSASGRRAAAEPSPKMVEALKAWRLAEARKRRVPAFRILTDRVL EAIASACPENGSELMAIHGVGPSLTERYGAQILSLVARRS >Mature_1560_residues MLAEKPSVARDIARVLGANERGEGWLRGNGYVVTWAIGHLVGLAQPHEIRADWKKWSRALLPMLPADWPLVVSKETRSQF EVVKQVLNAPEVSSVVCATDAGREGELIFRYIYDAAKCRKPVQRLWVSSLTERAIQDGFRRLADGREYEALAAAAMGRSR ADWLVGMNLSRLYTLAHGGHGEMLSVGRVQTPTLAMVVERELAIRDFVPRDYLELVATFAPRAKGVPPDALYKGTWFRSG PDGKPVAPPGFEGVREARRLDANGVEAQAIIDRVRAGRAIIESLESEEKRMAPPLLYDLTELQRHANRLHGFSAQRTLEV AQALYEKHKLLSYPRTASRHLSRTVADTLPEVVNAIRGPYEEDLAVGTGARALGKRYVDDAKVTDHHAIIPTPTAPGGVR LSPDEQRVYDLVCRRLLQAWHEDHVWRVTTVITAVTSAGAPPVVDRFQSTGTQVEQVGWKVLDIGGGQKAPRLKSEGRKG EDAEREPEDEPQTLPSGLARAQPQSVEDVEAVKKRTRPPPRFTDATLLTAMESAGRALDEKELADAMRETGLGTPATRAA IIEVLLDREYLRRRGKVMEATEKGIHLIQVVHPDVKTPAMTGQWEAWLQRIERGEGQLDEFIRGIEAYVIEVVGHGATAP QRPPRNEVLGAPPGAGWGQGGAAQVASEGAAAAHGAGAGARGPGGQGAFAESSAERFGDASAGGAGRGRQGAFTEASAER FADAAPGVQGQGRPGALSEASEPLFGTRRSRTSGSVGRSEPHGEPLSSTMSPGGGAASRLPRADGTGWNAGAWENTGAAR APVNRARTPASAASTGQRPERVRRAPTAPEALRPLLKEAFGFSDFRPYQEAVCRAATAGEDLLLVMPTGAGKSLCYQLPG LARAGTTLVVSPLIALMEDQVARLQSLGFAADRIHSGRDRAMSRQVCADYLEDRLDFLFIAPERLGVPGFVEFLARRTPA LIAVDEAHCISQWGHDFRPDYRLLGARLPLLRPAPVVALTATATPDVQRDIVQQLGLQGPGGKARTFIHGFRRTNIAIEV RELNPGARGDAIQGLLEDEENRPAIVYAATRKHAEQLADQLAGEFPAAAYHAGLQPSERDRVQAEFLRGSLEVIVATTAF GMGIDKADVRTVIHAALPASLEGYYQELGRAGRDGKPSRAVLLHSYIDRRTHEFFHRRDYPEAYVLERLFKSTAPQLEPK AVLQGRVRGDPEVFDKALEQLWIHGGVVMTPDETVMRGKPGWSASYSAQRDRKLLHLEQMGRYAEAHGCRMKQLVGHFGD TQDSGEPCGLCDVCAPEDCATLRFAEPTSAERHWLERILESLQERDGQATGRLHRELFGESLPRRDFERLVGGLVRAGLT RLEVDSFDKDGQVISFQRLALTDEGRRTRAVDPQRVVLPLPLEKAAKRKRGKGAEKGTAKRATAKKRTVRAKAGAATRRT ASESDEEDSPTHWRANAPSKSTAGAPRASRSTGAPSGSASGRRAAAEPSPKMVEALKAWRLAEARKRRVPAFRILTDRVL EAIASACPENGSELMAIHGVGPSLTERYGAQILSLVARRS
Specific function: The reaction catalyzed by topoisomerases leads to the conversion of one topological isomer of DNA to another. TOP3 is a potent decatenase [H]
COG id: COG0550
COG function: function code L; Topoisomerase IA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Toprim domain [H]
Homologues:
Organism=Homo sapiens, GI51242947, Length=373, Percent_Identity=43.9678284182306, Blast_Score=259, Evalue=1e-68, Organism=Homo sapiens, GI51242943, Length=373, Percent_Identity=43.9678284182306, Blast_Score=259, Evalue=2e-68, Organism=Homo sapiens, GI148612816, Length=373, Percent_Identity=43.9678284182306, Blast_Score=258, Evalue=5e-68, Organism=Homo sapiens, GI4557365, Length=381, Percent_Identity=38.8451443569554, Blast_Score=255, Evalue=2e-67, Organism=Homo sapiens, GI14591902, Length=351, Percent_Identity=39.031339031339, Blast_Score=250, Evalue=6e-66, Organism=Homo sapiens, GI14591904, Length=351, Percent_Identity=39.031339031339, Blast_Score=250, Evalue=6e-66, Organism=Homo sapiens, GI169218196, Length=346, Percent_Identity=39.8843930635838, Blast_Score=225, Evalue=3e-58, Organism=Homo sapiens, GI110735439, Length=346, Percent_Identity=39.8843930635838, Blast_Score=225, Evalue=3e-58, Organism=Homo sapiens, GI284005309, Length=362, Percent_Identity=38.121546961326, Blast_Score=191, Evalue=4e-48, Organism=Homo sapiens, GI222352149, Length=350, Percent_Identity=23.4285714285714, Blast_Score=75, Evalue=6e-13, Organism=Escherichia coli, GI1788061, Length=665, Percent_Identity=33.2330827067669, Blast_Score=320, Evalue=6e-88, Organism=Escherichia coli, GI48994977, Length=337, Percent_Identity=45.9940652818991, Blast_Score=281, Evalue=2e-76, Organism=Escherichia coli, GI1787529, Length=668, Percent_Identity=23.2035928143713, Blast_Score=92, Evalue=4e-19, Organism=Escherichia coli, GI87082221, Length=382, Percent_Identity=23.8219895287958, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71987997, Length=355, Percent_Identity=39.1549295774648, Blast_Score=257, Evalue=4e-68, Organism=Caenorhabditis elegans, GI71987993, Length=355, Percent_Identity=39.1549295774648, Blast_Score=256, Evalue=5e-68, Organism=Caenorhabditis elegans, GI25145561, Length=351, Percent_Identity=39.6011396011396, Blast_Score=250, Evalue=4e-66, Organism=Caenorhabditis elegans, GI32564293, Length=378, Percent_Identity=38.8888888888889, Blast_Score=235, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17552866, Length=339, Percent_Identity=38.6430678466077, Blast_Score=221, Evalue=2e-57, Organism=Caenorhabditis elegans, GI32563869, Length=668, Percent_Identity=25.8982035928144, Blast_Score=117, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17508543, Length=114, Percent_Identity=35.0877192982456, Blast_Score=68, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323844, Length=367, Percent_Identity=39.5095367847411, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI24646066, Length=343, Percent_Identity=39.6501457725948, Blast_Score=254, Evalue=3e-67, Organism=Drosophila melanogaster, GI24664226, Length=488, Percent_Identity=33.8114754098361, Blast_Score=221, Evalue=3e-57, Organism=Drosophila melanogaster, GI24664230, Length=487, Percent_Identity=33.4702258726899, Blast_Score=212, Evalue=2e-54, Organism=Drosophila melanogaster, GI62472181, Length=487, Percent_Identity=33.4702258726899, Blast_Score=212, Evalue=2e-54, Organism=Drosophila melanogaster, GI21358123, Length=377, Percent_Identity=34.4827586206897, Blast_Score=185, Evalue=2e-46, Organism=Drosophila melanogaster, GI21355075, Length=396, Percent_Identity=22.979797979798, Blast_Score=77, Evalue=1e-13, Organism=Drosophila melanogaster, GI24584399, Length=361, Percent_Identity=22.9916897506925, Blast_Score=77, Evalue=1e-13, Organism=Drosophila melanogaster, GI28574962, Length=356, Percent_Identity=23.5955056179775, Blast_Score=68, Evalue=4e-11, Organism=Drosophila melanogaster, GI24666101, Length=330, Percent_Identity=26.0606060606061, Blast_Score=67, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003601 - InterPro: IPR013497 - InterPro: IPR013824 - InterPro: IPR013825 - InterPro: IPR000380 - InterPro: IPR003602 - InterPro: IPR005738 - InterPro: IPR006171 [H]
Pfam domain/function: PF01131 Topoisom_bac; PF01751 Toprim [H]
EC number: =5.99.1.2 [H]
Molecular weight: Translated: 169642; Mature: 169642
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS50967 HRDC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAEKPSVARDIARVLGANERGEGWLRGNGYVVTWAIGHLVGLAQPHEIRADWKKWSRAL CCCCCCHHHHHHHHHHCCCCCCCCEEECCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHH LPMLPADWPLVVSKETRSQFEVVKQVLNAPEVSSVVCATDAGREGELIFRYIYDAAKCRK HHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH PVQRLWVSSLTERAIQDGFRRLADGREYEALAAAAMGRSRADWLVGMNLSRLYTLAHGGH HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCC GEMLSVGRVQTPTLAMVVERELAIRDFVPRDYLELVATFAPRAKGVPPDALYKGTWFRSG CCEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCC PDGKPVAPPGFEGVREARRLDANGVEAQAIIDRVRAGRAIIESLESEEKRMAPPLLYDLT CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ELQRHANRLHGFSAQRTLEVAQALYEKHKLLSYPRTASRHLSRTVADTLPEVVNAIRGPY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC EEDLAVGTGARALGKRYVDDAKVTDHHAIIPTPTAPGGVRLSPDEQRVYDLVCRRLLQAW HHHHHHCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHH HEDHVWRVTTVITAVTSAGAPPVVDRFQSTGTQVEQVGWKVLDIGGGQKAPRLKSEGRKG CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCCEEEECCCCCCCCCHHHCCCCC EDAEREPEDEPQTLPSGLARAQPQSVEDVEAVKKRTRPPPRFTDATLLTAMESAGRALDE CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCH KELADAMRETGLGTPATRAAIIEVLLDREYLRRRGKVMEATEKGIHLIQVVHPDVKTPAM HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCC TGQWEAWLQRIERGEGQLDEFIRGIEAYVIEVVGHGATAPQRPPRNEVLGAPPGAGWGQG CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GAAQVASEGAAAAHGAGAGARGPGGQGAFAESSAERFGDASAGGAGRGRQGAFTEASAER CHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH FADAAPGVQGQGRPGALSEASEPLFGTRRSRTSGSVGRSEPHGEPLSSTMSPGGGAASRL HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHCC PRADGTGWNAGAWENTGAARAPVNRARTPASAASTGQRPERVRRAPTAPEALRPLLKEAF CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHHC GFSDFRPYQEAVCRAATAGEDLLLVMPTGAGKSLCYQLPGLARAGTTLVVSPLIALMEDQ CCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCHHCCHHHHHHHHHHHHHHH VARLQSLGFAADRIHSGRDRAMSRQVCADYLEDRLDFLFIAPERLGVPGFVEFLARRTPA HHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCEEEECHHHCCCCHHHHHHHHCCCC LIAVDEAHCISQWGHDFRPDYRLLGARLPLLRPAPVVALTATATPDVQRDIVQQLGLQGP EEEECHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCC GGKARTFIHGFRRTNIAIEVRELNPGARGDAIQGLLEDEENRPAIVYAATRKHAEQLADQ CCHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHH LAGEFPAAAYHAGLQPSERDRVQAEFLRGSLEVIVATTAFGMGIDKADVRTVIHAALPAS HHCCCCHHHHHCCCCCCHHHHHHHHHHHCCHHEEEEHHHHHCCCCHHHHHHHHHHHCCHH LEGYYQELGRAGRDGKPSRAVLLHSYIDRRTHEFFHRRDYPEAYVLERLFKSTAPQLEPK HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCH AVLQGRVRGDPEVFDKALEQLWIHGGVVMTPDETVMRGKPGWSASYSAQRDRKLLHLEQM HHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHH GRYAEAHGCRMKQLVGHFGDTQDSGEPCGLCDVCAPEDCATLRFAEPTSAERHWLERILE HHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH SLQERDGQATGRLHRELFGESLPRRDFERLVGGLVRAGLTRLEVDSFDKDGQVISFQRLA HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEHEE LTDEGRRTRAVDPQRVVLPLPLEKAAKRKRGKGAEKGTAKRATAKKRTVRAKAGAATRRT ECCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHC ASESDEEDSPTHWRANAPSKSTAGAPRASRSTGAPSGSASGRRAAAEPSPKMVEALKAWR CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LAEARKRRVPAFRILTDRVLEAIASACPENGSELMAIHGVGPSLTERYGAQILSLVARRS HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLAEKPSVARDIARVLGANERGEGWLRGNGYVVTWAIGHLVGLAQPHEIRADWKKWSRAL CCCCCCHHHHHHHHHHCCCCCCCCEEECCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHH LPMLPADWPLVVSKETRSQFEVVKQVLNAPEVSSVVCATDAGREGELIFRYIYDAAKCRK HHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH PVQRLWVSSLTERAIQDGFRRLADGREYEALAAAAMGRSRADWLVGMNLSRLYTLAHGGH HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCC GEMLSVGRVQTPTLAMVVERELAIRDFVPRDYLELVATFAPRAKGVPPDALYKGTWFRSG CCEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCC PDGKPVAPPGFEGVREARRLDANGVEAQAIIDRVRAGRAIIESLESEEKRMAPPLLYDLT CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ELQRHANRLHGFSAQRTLEVAQALYEKHKLLSYPRTASRHLSRTVADTLPEVVNAIRGPY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC EEDLAVGTGARALGKRYVDDAKVTDHHAIIPTPTAPGGVRLSPDEQRVYDLVCRRLLQAW HHHHHHCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHH HEDHVWRVTTVITAVTSAGAPPVVDRFQSTGTQVEQVGWKVLDIGGGQKAPRLKSEGRKG CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCCEEEECCCCCCCCCHHHCCCCC EDAEREPEDEPQTLPSGLARAQPQSVEDVEAVKKRTRPPPRFTDATLLTAMESAGRALDE CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCH KELADAMRETGLGTPATRAAIIEVLLDREYLRRRGKVMEATEKGIHLIQVVHPDVKTPAM HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCC TGQWEAWLQRIERGEGQLDEFIRGIEAYVIEVVGHGATAPQRPPRNEVLGAPPGAGWGQG CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GAAQVASEGAAAAHGAGAGARGPGGQGAFAESSAERFGDASAGGAGRGRQGAFTEASAER CHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH FADAAPGVQGQGRPGALSEASEPLFGTRRSRTSGSVGRSEPHGEPLSSTMSPGGGAASRL HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHCC PRADGTGWNAGAWENTGAARAPVNRARTPASAASTGQRPERVRRAPTAPEALRPLLKEAF CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHHC GFSDFRPYQEAVCRAATAGEDLLLVMPTGAGKSLCYQLPGLARAGTTLVVSPLIALMEDQ CCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCHHCCHHHHHHHHHHHHHHH VARLQSLGFAADRIHSGRDRAMSRQVCADYLEDRLDFLFIAPERLGVPGFVEFLARRTPA HHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCEEEECHHHCCCCHHHHHHHHCCCC LIAVDEAHCISQWGHDFRPDYRLLGARLPLLRPAPVVALTATATPDVQRDIVQQLGLQGP EEEECHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCC GGKARTFIHGFRRTNIAIEVRELNPGARGDAIQGLLEDEENRPAIVYAATRKHAEQLADQ CCHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHH LAGEFPAAAYHAGLQPSERDRVQAEFLRGSLEVIVATTAFGMGIDKADVRTVIHAALPAS HHCCCCHHHHHCCCCCCHHHHHHHHHHHCCHHEEEEHHHHHCCCCHHHHHHHHHHHCCHH LEGYYQELGRAGRDGKPSRAVLLHSYIDRRTHEFFHRRDYPEAYVLERLFKSTAPQLEPK HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCH AVLQGRVRGDPEVFDKALEQLWIHGGVVMTPDETVMRGKPGWSASYSAQRDRKLLHLEQM HHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHH GRYAEAHGCRMKQLVGHFGDTQDSGEPCGLCDVCAPEDCATLRFAEPTSAERHWLERILE HHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH SLQERDGQATGRLHRELFGESLPRRDFERLVGGLVRAGLTRLEVDSFDKDGQVISFQRLA HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEHEE LTDEGRRTRAVDPQRVVLPLPLEKAAKRKRGKGAEKGTAKRATAKKRTVRAKAGAATRRT ECCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHC ASESDEEDSPTHWRANAPSKSTAGAPRASRSTGAPSGSASGRRAAAEPSPKMVEALKAWR CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LAEARKRRVPAFRILTDRVLEAIASACPENGSELMAIHGVGPSLTERYGAQILSLVARRS HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA