| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760992
Identifier: 108760992
GI number: 108760992
Start: 6266793
End: 6268469
Strand: Reverse
Name: 108760992
Synonym: MXAN_5013
Alternate gene names: NA
Gene position: 6268469-6266793 (Counterclockwise)
Preceding gene: 108758917
Following gene: 108761279
Centisome position: 68.58
GC content: 62.43
Gene sequence:
>1677_bases TTGAATTGCGACAGTCGTTCTGCTGCATATGTTGCACAGTGGCACGCAGCTGCGGGCTGCGCGGTGGGGCTCATGCAAAA GCTGTCAATGACTGTCGTGATGCTGTGCGGAACGCTCGTGTCAGGGTGCCAGGGAGGAGAGGAGGAGCAGCCGGCCCTCG AACAGTCAGGTGGCCCCGGTATCGCGGCGTCTGTCGCGTCCTCAAGTCAGGCGGTCGTCTCTCCGGCCCTCGCGGCATCG CTCTCGTGTGTCGAGACGTACGTCAATGCGGGGACCTGCGACTGGGCGCACTGGAGTGAGATGTGGGAGACCTGCGAGAC CTACGAGCACCCCGAACTTGAGGACGGAGTCTTCCTTGAGGCAGTGCAGGTAGAAGACTGCACGGTGGCCAACTGGTCTA CGTTGCGCGCACAGCTTCTCGCACCGCGCACGCCTTTCGTCAGCGTGCGCGACAGTTGCAATGGGGAGTCCCAGATGATC TACGAGGCCGCGTCCAACGGCTGCCACTCGTTGGATGCAGCCGCGGGCGCATCCTTTTTTGACGTACCGATCGGCAAGAG CGTGACGCTCCATTCTGGCGCGCACTGCACTGGAGACTCGGTCGCCGTCGAGACCGACGCGAGCCTCTGTGAGACTTCGT TCGACAGTGGTGCAATCGCGAACGATAACGTGCGCGCGTTCCGAATCAGCGACATCGAGGCACCCTCGTCGCCGTACCGA TATACCTGCGCCGACGATGAGCCGACGTGCGTCCAGAACTTCAACAGCAGACTGGGAGGCATCAACAAGAAGCTCACCGT CCGCGCCGTCCGGATGACCCTCGCTGGCAGGGCAACTCCCTCGATGGACGCCATCAAGAGAACCATCGGTAACCTGAGCG ACCACTTCTCCGTCGCGTCTCGTGGTCAGGTCCGCCTGGACCTCATCGGTTCGCAGACCGTGAGCGTGACTTCCCAGAAC TGCAAGATTGCCAAGCAGCAGGCCAGACAGAAGTCCAATTCGAACGCAGACCTGACCGTGTATGTACTGCCTGGCGGGAT GTGCGATACCTCGAACGGCGGGGGGCGCAGCGTCTACATCAAAGGCAACCTGTTCCGGGACTACGCCCACGAGGTGGGGC ACGTCCTCGGGCTCGGGCACGGCAACCGGCGCGATTCCACGACGGGCAAGCAGGTGAGGTCTGCCGACTCGAGCACGTAC ATGGGCAAGTTTGCGTCAGACAACTACAACCTCCCACAGCTCCACTGGTTGGGGTGGACCCAGAAGGAGGAGCTCGTCAA GGTCAACTCGGCCATCGACAACGGTGGTTCCATTGACGTCACGCTCCGTCCGGTGGGCGCCAATGCCCACAGCACCAGCA GCCTCCCTCTAGGCGCGGTCTGGGAAGTTCCCGACACCGAGCAGCGGCTGTTCATCGCCGTGCCAAAGGCGCGGACCAAC AGCTCGAACGAGATTGAGGGCGGCACGGTGTTCGTGTACCGCGGCTCCAGGGCCGTGGGCTGCACGGGCATCTGCCTGGG AACGCTTCAGTTGGCGCGGTTCAGCGCCAAATCGAACAACGAACACGAAGCGACCGGCATCTTCGTCAAGCCGGTGGCCT ACACCAGCCATTTCATCCAGGAAGACGGAAAGCGCATCGAGGTGTTCTCCTCCGTCACGCTGCGCATCAGGCGGTAG
Upstream 100 bases:
>100_bases AGGCAAAACGCGTAAAACACTTCGCACCTCGAAGAGCGTCGGCCGCGTAACCCACTGACAAACCAGCCCCGCTGGCATCA CCCATGGGTTGGCCTATTGA
Downstream 100 bases:
>100_bases GGGCAGTCCGTGACTGAAACCGGTGCGTGCTGAGCACCAGCACCTCGTCTCTCGCGGCGGTATGCTGCGCCGCGAGAGCG GGGCGCTTTTCCCCTCACCT
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MNCDSRSAAYVAQWHAAAGCAVGLMQKLSMTVVMLCGTLVSGCQGGEEEQPALEQSGGPGIAASVASSSQAVVSPALAAS LSCVETYVNAGTCDWAHWSEMWETCETYEHPELEDGVFLEAVQVEDCTVANWSTLRAQLLAPRTPFVSVRDSCNGESQMI YEAASNGCHSLDAAAGASFFDVPIGKSVTLHSGAHCTGDSVAVETDASLCETSFDSGAIANDNVRAFRISDIEAPSSPYR YTCADDEPTCVQNFNSRLGGINKKLTVRAVRMTLAGRATPSMDAIKRTIGNLSDHFSVASRGQVRLDLIGSQTVSVTSQN CKIAKQQARQKSNSNADLTVYVLPGGMCDTSNGGGRSVYIKGNLFRDYAHEVGHVLGLGHGNRRDSTTGKQVRSADSSTY MGKFASDNYNLPQLHWLGWTQKEELVKVNSAIDNGGSIDVTLRPVGANAHSTSSLPLGAVWEVPDTEQRLFIAVPKARTN SSNEIEGGTVFVYRGSRAVGCTGICLGTLQLARFSAKSNNEHEATGIFVKPVAYTSHFIQEDGKRIEVFSSVTLRIRR
Sequences:
>Translated_558_residues MNCDSRSAAYVAQWHAAAGCAVGLMQKLSMTVVMLCGTLVSGCQGGEEEQPALEQSGGPGIAASVASSSQAVVSPALAAS LSCVETYVNAGTCDWAHWSEMWETCETYEHPELEDGVFLEAVQVEDCTVANWSTLRAQLLAPRTPFVSVRDSCNGESQMI YEAASNGCHSLDAAAGASFFDVPIGKSVTLHSGAHCTGDSVAVETDASLCETSFDSGAIANDNVRAFRISDIEAPSSPYR YTCADDEPTCVQNFNSRLGGINKKLTVRAVRMTLAGRATPSMDAIKRTIGNLSDHFSVASRGQVRLDLIGSQTVSVTSQN CKIAKQQARQKSNSNADLTVYVLPGGMCDTSNGGGRSVYIKGNLFRDYAHEVGHVLGLGHGNRRDSTTGKQVRSADSSTY MGKFASDNYNLPQLHWLGWTQKEELVKVNSAIDNGGSIDVTLRPVGANAHSTSSLPLGAVWEVPDTEQRLFIAVPKARTN SSNEIEGGTVFVYRGSRAVGCTGICLGTLQLARFSAKSNNEHEATGIFVKPVAYTSHFIQEDGKRIEVFSSVTLRIRR >Mature_558_residues MNCDSRSAAYVAQWHAAAGCAVGLMQKLSMTVVMLCGTLVSGCQGGEEEQPALEQSGGPGIAASVASSSQAVVSPALAAS LSCVETYVNAGTCDWAHWSEMWETCETYEHPELEDGVFLEAVQVEDCTVANWSTLRAQLLAPRTPFVSVRDSCNGESQMI YEAASNGCHSLDAAAGASFFDVPIGKSVTLHSGAHCTGDSVAVETDASLCETSFDSGAIANDNVRAFRISDIEAPSSPYR YTCADDEPTCVQNFNSRLGGINKKLTVRAVRMTLAGRATPSMDAIKRTIGNLSDHFSVASRGQVRLDLIGSQTVSVTSQN CKIAKQQARQKSNSNADLTVYVLPGGMCDTSNGGGRSVYIKGNLFRDYAHEVGHVLGLGHGNRRDSTTGKQVRSADSSTY MGKFASDNYNLPQLHWLGWTQKEELVKVNSAIDNGGSIDVTLRPVGANAHSTSSLPLGAVWEVPDTEQRLFIAVPKARTN SSNEIEGGTVFVYRGSRAVGCTGICLGTLQLARFSAKSNNEHEATGIFVKPVAYTSHFIQEDGKRIEVFSSVTLRIRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59612; Mature: 59612
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCDSRSAAYVAQWHAAAGCAVGLMQKLSMTVVMLCGTLVSGCQGGEEEQPALEQSGGPG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC IAASVASSSQAVVSPALAASLSCVETYVNAGTCDWAHWSEMWETCETYEHPELEDGVFLE EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE AVQVEDCTVANWSTLRAQLLAPRTPFVSVRDSCNGESQMIYEAASNGCHSLDAAAGASFF EEEECCCEECCHHHHHHHHHCCCCCEEEECCCCCCCHHEEEEHHCCCCCCCHHHCCCCEE DVPIGKSVTLHSGAHCTGDSVAVETDASLCETSFDSGAIANDNVRAFRISDIEAPSSPYR ECCCCCEEEEECCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCE YTCADDEPTCVQNFNSRLGGINKKLTVRAVRMTLAGRATPSMDAIKRTIGNLSDHFSVAS EEECCCCCHHHHHHHHHHCCCCCEEEEEEEEEHHCCCCCCCHHHHHHHHCCCHHHHHHCC RGQVRLDLIGSQTVSVTSQNCKIAKQQARQKSNSNADLTVYVLPGGMCDTSNGGGRSVYI CCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCCEEEEE KGNLFRDYAHEVGHVLGLGHGNRRDSTTGKQVRSADSSTYMGKFASDNYNLPQLHWLGWT ECCHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCEEEECCCC QKEELVKVNSAIDNGGSIDVTLRPVGANAHSTSSLPLGAVWEVPDTEQRLFIAVPKARTN CHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCC SSNEIEGGTVFVYRGSRAVGCTGICLGTLQLARFSAKSNNEHEATGIFVKPVAYTSHFIQ CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHH EDGKRIEVFSSVTLRIRR CCCCEEEEEEEEEEEEEC >Mature Secondary Structure MNCDSRSAAYVAQWHAAAGCAVGLMQKLSMTVVMLCGTLVSGCQGGEEEQPALEQSGGPG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC IAASVASSSQAVVSPALAASLSCVETYVNAGTCDWAHWSEMWETCETYEHPELEDGVFLE EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE AVQVEDCTVANWSTLRAQLLAPRTPFVSVRDSCNGESQMIYEAASNGCHSLDAAAGASFF EEEECCCEECCHHHHHHHHHCCCCCEEEECCCCCCCHHEEEEHHCCCCCCCHHHCCCCEE DVPIGKSVTLHSGAHCTGDSVAVETDASLCETSFDSGAIANDNVRAFRISDIEAPSSPYR ECCCCCEEEEECCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCE YTCADDEPTCVQNFNSRLGGINKKLTVRAVRMTLAGRATPSMDAIKRTIGNLSDHFSVAS EEECCCCCHHHHHHHHHHCCCCCEEEEEEEEEHHCCCCCCCHHHHHHHHCCCHHHHHHCC RGQVRLDLIGSQTVSVTSQNCKIAKQQARQKSNSNADLTVYVLPGGMCDTSNGGGRSVYI CCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCCEEEEE KGNLFRDYAHEVGHVLGLGHGNRRDSTTGKQVRSADSSTYMGKFASDNYNLPQLHWLGWT ECCHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCEEEECCCC QKEELVKVNSAIDNGGSIDVTLRPVGANAHSTSSLPLGAVWEVPDTEQRLFIAVPKARTN CHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCC SSNEIEGGTVFVYRGSRAVGCTGICLGTLQLARFSAKSNNEHEATGIFVKPVAYTSHFIQ CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHH EDGKRIEVFSSVTLRIRR CCCCEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA