Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is dsbE [C]

Identifier: 108760975

GI number: 108760975

Start: 345476

End: 346057

Strand: Direct

Name: dsbE [C]

Synonym: MXAN_0290

Alternate gene names: 108760975

Gene position: 345476-346057 (Clockwise)

Preceding gene: 108761980

Following gene: 108758396

Centisome position: 3.78

GC content: 65.81

Gene sequence:

>582_bases
ATGAAGCAGGTCTTCACCGCACTCGCGCTGGGCACGTTACTCATCGGGGCGCCCGCCCTCGCCGACGCGGAAGTTGGCAA
GCCCGCGCCGACCTTCACGCTGAAGGACGAGTCCGGCAAGGAGCACACGCTGGCGCAGTACAAGGGCAAGGTCGTGGTCC
TGGAGTGGACCAACCCCGAGTGCCCCTTCGTTCAGCGGCACTACAAGAACGACACGATGGTCACCACGCTGAAGGGCTTC
GACGCGAAGAAGGTGGTGTGGCTGGCGGTGGACTCCACCGCGCACAACACCCCGGAGAAGTCCGCGGCGTGGAAGAAGGA
TGAGGGCTTCCCCTACCCGGTTCTCCAGGACGCGAGCGGCACGGTAGGCAAGTCCTATGGCGCGAAGACGACGCCGCACA
TGTACGTCATCGACGAGACGGGCGTTGTCCGCTACGCGGGCGCCATCGACGATGACCCGCGCGGCAAGAACGCCAAGCCG
GCCAACCATGTGAAGACGGCGGTGGACGCGGTGGTGGGTGGCCAGCAGGTCCCGGCGAGCACCACCACGCCCTACGGCTG
CTCGGTGAAGTACAAGAGCTAG

Upstream 100 bases:

>100_bases
AAGCTGGGCAACGGCGCGAACGTCCTCTGCGCCGCGGGTTTCCCGAGTCACTGAAGTCGCGCTGTCTTCCCCGCAGTCCC
CAAAACGCTGGAGGAACGCC

Downstream 100 bases:

>100_bases
CGCTGGTTCGGCTGTGTGGATTCCCGAAGGCCCTCGTCCCTGCTGGGGCGGGGGCCTTCTGCTTGGGCGGCAGGCGACGG
CGCCATGGCAGGTGCCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Redoxin Superfamily; Thiol-Disulfide Isomerase; Thiol-Disulfide Isomerase/Thioredoxin; Thiol-Disulfide Isomerase Or Thioredoxin; Antioxidant AhpC/TSA Family; Alpha Amylase Domain-Containing Protein; Anti-Oxidant AhpCTSA Family Protein; Redoxin; Redoxin Domain Protein; Alkyl Hydroperoxide Reductase; Thiol-Disulfide Isomerase And Thioredoxin; Thiol-Disulfide Isomerase-Like Protein; Thiol-Disulfide Oxidoreductase ResA; Thioredoxin

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKQVFTALALGTLLIGAPALADAEVGKPAPTFTLKDESGKEHTLAQYKGKVVVLEWTNPECPFVQRHYKNDTMVTTLKGF
DAKKVVWLAVDSTAHNTPEKSAAWKKDEGFPYPVLQDASGTVGKSYGAKTTPHMYVIDETGVVRYAGAIDDDPRGKNAKP
ANHVKTAVDAVVGGQQVPASTTTPYGCSVKYKS

Sequences:

>Translated_193_residues
MKQVFTALALGTLLIGAPALADAEVGKPAPTFTLKDESGKEHTLAQYKGKVVVLEWTNPECPFVQRHYKNDTMVTTLKGF
DAKKVVWLAVDSTAHNTPEKSAAWKKDEGFPYPVLQDASGTVGKSYGAKTTPHMYVIDETGVVRYAGAIDDDPRGKNAKP
ANHVKTAVDAVVGGQQVPASTTTPYGCSVKYKS
>Mature_193_residues
MKQVFTALALGTLLIGAPALADAEVGKPAPTFTLKDESGKEHTLAQYKGKVVVLEWTNPECPFVQRHYKNDTMVTTLKGF
DAKKVVWLAVDSTAHNTPEKSAAWKKDEGFPYPVLQDASGTVGKSYGAKTTPHMYVIDETGVVRYAGAIDDDPRGKNAKP
ANHVKTAVDAVVGGQQVPASTTTPYGCSVKYKS

Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20712; Mature: 20712

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVFTALALGTLLIGAPALADAEVGKPAPTFTLKDESGKEHTLAQYKGKVVVLEWTNPE
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCEEEEEECCCC
CPFVQRHYKNDTMVTTLKGFDAKKVVWLAVDSTAHNTPEKSAAWKKDEGFPYPVLQDASG
CCHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCC
TVGKSYGAKTTPHMYVIDETGVVRYAGAIDDDPRGKNAKPANHVKTAVDAVVGGQQVPAS
CCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
TTTPYGCSVKYKS
CCCCCCEEEEECC
>Mature Secondary Structure
MKQVFTALALGTLLIGAPALADAEVGKPAPTFTLKDESGKEHTLAQYKGKVVVLEWTNPE
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCEEEEEECCCC
CPFVQRHYKNDTMVTTLKGFDAKKVVWLAVDSTAHNTPEKSAAWKKDEGFPYPVLQDASG
CCHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCC
TVGKSYGAKTTPHMYVIDETGVVRYAGAIDDDPRGKNAKPANHVKTAVDAVVGGQQVPAS
CCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
TTTPYGCSVKYKS
CCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA