| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760954
Identifier: 108760954
GI number: 108760954
Start: 5593616
End: 5594743
Strand: Reverse
Name: 108760954
Synonym: MXAN_4514
Alternate gene names: NA
Gene position: 5594743-5593616 (Counterclockwise)
Preceding gene: 108761986
Following gene: 108757143
Centisome position: 61.21
GC content: 66.67
Gene sequence:
>1128_bases ATGGTCAGGATTCTTCATTCAGCGGATTGGCAGATGGGCCTCCGAGCCCGTCATGTGGCTCATGTCGCGGAGGACGTCCG GAAGGCGAGACTGGAGGCCGCGAGCAACGTCATCAGCGCGGCCAACCGGTCGAAGGTGGATGCCGTCGTCCTGGCGGGTG ACATCTTCGAGCACAATGTCGTCGAGGACCGCGTCGTCCATGCGGTCATCAAGGTGCTCGCGGGCTCTCTCGCGCCCGTG TACGTCCTGCCCGGCAACCACGATGCGCTGACGCCGGATGCCGTCTTCCGCCGGGCCTCCTGGAATCAGCGCCCGGATCA CATCACCGTGCTGGATGGGAATGCGGCGGTGCCCATCCCGCACACCGATGCCGTGTTGCTCCCCGCGCCACTCCGCCAGA AGAAGGGTATGAAGGACCCCACCGCCGGCTGGGAGATGGCGTCCGGCCTGGACGTGATTCGCATCGGCGTGGCGCATGGC TCCCTGCGCATCGAAGGCAAGCACGCCGCGGACGACTTCCCCATCGCACTGGACGCGGCGGTCCGCGCTGGCCTCGACTA CCTGGCCTTGGGTCACTGGCATGGGCAGTACGTCCATGACGGTCGTACGGCCTACTCGGGAGCCCACGAGACGACGAAGT TCGGTGAGGTGGGCTCGGGGCAGGCACTGCTGGTGGAACTCTCGTCGCGGGGCGCCGTGCCCCGGCTGGAGCCGATTGCA ACAGGGGCGCTGACCTGGAGGACGGTGGAGCTGGACCTGAGTCAGGGCCACGAGCCGGAGGTGGCTCGGGCTCGGGAGCT CGTGGCGCAGCTGGCGCGCCCCGAAAGGGCGCTGCTGCGCATTCACACGACGGGATTTTCTTCCGAGGACGCCTCATCAG GGTTGGAGGCGTTCCGTGAGGAGCTTCAGGGGGGAGGGCTCCTTCATGTCTGCATCGAGCGCGAGGACATACCACGCGCG AAGGCAGAGGGGCGCCTCGCGGACATCGCAGGTTCGAGCAGTCTGGTCTCCTCGTTGCTGGATGGGCTGAACAAACCGGC CGCAGTTGGACCAGGTGCCACGCCGGAGCCCGTCAGGACCGCGGCCAGACAGTTGCTGTCAGAGCTGGTGATGGAGGTGT GGAAATGA
Upstream 100 bases:
>100_bases CGCCGGATAGGCGTGGCCCCTCCACGTCAGATCTCATGAAGCCAGTACTACCACCCTGGAGGTATGTGCGGCTCCGCGAC ACATCTGTACCGTCCTTTAA
Downstream 100 bases:
>100_bases TTTTGCGCAGGCTTTGCGTCCAGCACTTTCGCTGCTTCCGGAGCCCGGTGGACCTGCAAGGGCTGGGAACGGGCATCCAT GTCATCCATGCGCCCAATGA
Product: metallophosphoesterase
Products: NA
Alternate protein names: DNA Repair Exonuclease; Exonuclease; Exonuclease SbcD; Ser/Thr Protein Phosphatase Family Protein; Exonuclease SbcD Family Protein; Calcineurin-Like Phosphoesterase Family; Phosphoesterase; DNA Repair Exonuclease Or Phosphoesterase; DNA Repair Exonuclease SbcD
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MVRILHSADWQMGLRARHVAHVAEDVRKARLEAASNVISAANRSKVDAVVLAGDIFEHNVVEDRVVHAVIKVLAGSLAPV YVLPGNHDALTPDAVFRRASWNQRPDHITVLDGNAAVPIPHTDAVLLPAPLRQKKGMKDPTAGWEMASGLDVIRIGVAHG SLRIEGKHAADDFPIALDAAVRAGLDYLALGHWHGQYVHDGRTAYSGAHETTKFGEVGSGQALLVELSSRGAVPRLEPIA TGALTWRTVELDLSQGHEPEVARARELVAQLARPERALLRIHTTGFSSEDASSGLEAFREELQGGGLLHVCIEREDIPRA KAEGRLADIAGSSSLVSSLLDGLNKPAAVGPGATPEPVRTAARQLLSELVMEVWK
Sequences:
>Translated_375_residues MVRILHSADWQMGLRARHVAHVAEDVRKARLEAASNVISAANRSKVDAVVLAGDIFEHNVVEDRVVHAVIKVLAGSLAPV YVLPGNHDALTPDAVFRRASWNQRPDHITVLDGNAAVPIPHTDAVLLPAPLRQKKGMKDPTAGWEMASGLDVIRIGVAHG SLRIEGKHAADDFPIALDAAVRAGLDYLALGHWHGQYVHDGRTAYSGAHETTKFGEVGSGQALLVELSSRGAVPRLEPIA TGALTWRTVELDLSQGHEPEVARARELVAQLARPERALLRIHTTGFSSEDASSGLEAFREELQGGGLLHVCIEREDIPRA KAEGRLADIAGSSSLVSSLLDGLNKPAAVGPGATPEPVRTAARQLLSELVMEVWK >Mature_375_residues MVRILHSADWQMGLRARHVAHVAEDVRKARLEAASNVISAANRSKVDAVVLAGDIFEHNVVEDRVVHAVIKVLAGSLAPV YVLPGNHDALTPDAVFRRASWNQRPDHITVLDGNAAVPIPHTDAVLLPAPLRQKKGMKDPTAGWEMASGLDVIRIGVAHG SLRIEGKHAADDFPIALDAAVRAGLDYLALGHWHGQYVHDGRTAYSGAHETTKFGEVGSGQALLVELSSRGAVPRLEPIA TGALTWRTVELDLSQGHEPEVARARELVAQLARPERALLRIHTTGFSSEDASSGLEAFREELQGGGLLHVCIEREDIPRA KAEGRLADIAGSSSLVSSLLDGLNKPAAVGPGATPEPVRTAARQLLSELVMEVWK
Specific function: Unknown
COG id: COG0420
COG function: function code L; DNA repair exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40175; Mature: 40175
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRILHSADWQMGLRARHVAHVAEDVRKARLEAASNVISAANRSKVDAVVLAGDIFEHNV CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHH VEDRVVHAVIKVLAGSLAPVYVLPGNHDALTPDAVFRRASWNQRPDHITVLDGNAAVPIP HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEECCCEECCCC HTDAVLLPAPLRQKKGMKDPTAGWEMASGLDVIRIGVAHGSLRIEGKHAADDFPIALDAA CCCCEEECCCHHHHCCCCCCCCCHHHHCCCCEEEEEEECCEEEECCCCCCCCCCCHHHHH VRAGLDYLALGHWHGQYVHDGRTAYSGAHETTKFGEVGSGQALLVELSSRGAVPRLEPIA HHCCCHHEEEECCCCCEEECCCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHH TGALTWRTVELDLSQGHEPEVARARELVAQLARPERALLRIHTTGFSSEDASSGLEAFRE CCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHH ELQGGGLLHVCIEREDIPRAKAEGRLADIAGSSSLVSSLLDGLNKPAAVGPGATPEPVRT HHCCCCEEEEEECCCCCCCHHHCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH AARQLLSELVMEVWK HHHHHHHHHHHHHCC >Mature Secondary Structure MVRILHSADWQMGLRARHVAHVAEDVRKARLEAASNVISAANRSKVDAVVLAGDIFEHNV CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHH VEDRVVHAVIKVLAGSLAPVYVLPGNHDALTPDAVFRRASWNQRPDHITVLDGNAAVPIP HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEECCCEECCCC HTDAVLLPAPLRQKKGMKDPTAGWEMASGLDVIRIGVAHGSLRIEGKHAADDFPIALDAA CCCCEEECCCHHHHCCCCCCCCCHHHHCCCCEEEEEEECCEEEECCCCCCCCCCCHHHHH VRAGLDYLALGHWHGQYVHDGRTAYSGAHETTKFGEVGSGQALLVELSSRGAVPRLEPIA HHCCCHHEEEECCCCCEEECCCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHH TGALTWRTVELDLSQGHEPEVARARELVAQLARPERALLRIHTTGFSSEDASSGLEAFRE CCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHH ELQGGGLLHVCIEREDIPRAKAEGRLADIAGSSSLVSSLLDGLNKPAAVGPGATPEPVRT HHCCCCEEEEEECCCCCCCHHHCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH AARQLLSELVMEVWK HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA