| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is malF [H]
Identifier: 108760888
GI number: 108760888
Start: 6697789
End: 6699969
Strand: Direct
Name: malF [H]
Synonym: MXAN_5378
Alternate gene names: 108760888
Gene position: 6697789-6699969 (Clockwise)
Preceding gene: 108763267
Following gene: 108762278
Centisome position: 73.28
GC content: 68.73
Gene sequence:
>2181_bases GTGAGCCGGTGGCTCGGCCTGGCGCTGCTCGCCACGGCGCTGAGCGCGCACGCGGCGCCTGCGGCGGAGAAGCCGCTGAA GCTGTGGCACGCGTACCGCGGCGGCGAGGAGATGGCGCTCGTCCAGGCCACGGAGCTCTTCACCTCGAAGACGGGCGTCC AGGTGGAGCTGCTCGCCCTGCCCTACGACGCCTACGCTGCCAAGCTGACCAACGCCATTCCCCATGGCGTGGGCCCGGAC GTCTTCATCTTCAACCACGAGCGGCTGCTCAACTTCCACGCGATGCACCTGGTGGCTCCCGCCAGTGGCCTGGCGCGCGA GGACTACTTCCCCAACGCCGTGGAGGCGCTGGAGGTGGATGGCCAGGTGTACGGCTATCCCATGTCGCTCAAGTCGCTAG CGCTCTACGTCAATACGAAGCTCGTGCCCCAGCCGCCAGAGACGACGGACGCGCTGCTGGCGATGCTGCCCGCGCTGTCG GACGCGGACGCGGGCCGCTTCGGGCTGGCCTACGAGAGCGGCGACTTCTACTTCCACGCGGGGTTCCTCTTCGGCTTCGG CGGCGAGCTGTTCGATGCAAACGGCCGCGCGAGCTTCGACACACAGGGGATGGCCCGTTCCCTGGCCTTTGTGAAGGACC TGCAGGACCAGCGCTTCATTCCCCAGGAGGCATCGGGCGCGCTGGTGAAGAGCCTCTTCAACGACGGCCGTGCCGCCATG ATCATCAGCGGGCCGTGGTTCGCTGGGGAGATTGCCCCCCAGGTGGACTACCGCGTGGTGGGGCTGCCGGCGGTGAGCAC CACGAACATCCCCATCCGCCCCTTCCTGGGCGTGGAGACGGCCTACGTATCCGCGCGCTCCGAGCGAGCGGAGCAGGCCC AGGCGCTGGCGCGCTTCATCTCCCTGGGCGAGGCCTCTCGCGTGCGAGCCATGGTGGGCCGGCAGATTCCGGCGGACGTG GCCGCGTACACGCTGAAGGAGGTGCGGGAGGACACGCTCATCTCCTCCTTCCGCGAGGCGGCCCGCCACGCCACGCCCAT GCCCAACACGCTGGAGATGGCGCGCGTCTGGGAGCCCATGAAGCTGGCGCTGCGCGCGGTGCTCCAGGGCGGCACCGCGC CCCAGGACGCCGGCGCGCTGGCGGACCGGCGCTACCGCGCGCTGCACCGCGAGCGCCCTCCCGACGCCAGCCCTCTGCCC TGGCTGGGATTGGTGGGCGCCATGGCGCTGGGCGGCTCCGTCTGGGTCCTGCGGCGCCCGGCGGCGACGCTGCCTTTCAA GCAGCGGTACCCTGACGTGGCGCAGGCGGTGGCGTACATCACCCCCGCGGCGACTGGCGTGGCGCTGCTGGTGTTCGTCC CCTTCGCGGTGGGTCTCAGCCTGTCGCTGTTCCACCACGAGGCGGGGGGATACGCCTTCGTGGGCCTGGCCAACTTCGTG GATATCCTGGCCAGCCGCGGCTACAGCATCACCGAGCCCCTCTCCTTCTATTTCACGCTGGCCGTGACGCTACTGTGGGC GGTGGTCAACGTGGTGCTCCACGTCAGCATCGGCCTGTTCCTGGCGCTGCTGTTGAAGGATCCGCTGCTGAAGCTGCGGG GTGTCTACCGGGTGCTGCTCATCATCCCCTGGGCCGTGCCCAACTACATCACCGCGCTCATGTGGAAGGGCATGTTCCAC CGGCAGTTCGGCGCCATCAACGGCCTGCTGGTCGCCCTGGACCTGGAGCCGGTGAGCTGGTTCACGCGCTTCTCCACAGC CTTCGCGGCCAACGTGGTCACCAACACCTGGCTGGGGTTTCCCTTCATGATGGTGGTGGCGCTGGGCGCGCTCCAGTCCA TCCCCCAGGAGCTCTACGAAGCCGCGGAGGTGGACGGCGCGAGCAAGTGGACGCAGTTCCGCCGCATCACCCTGCCGCTG CTGAGGCCCGCCATGCTGCCCGCCGTCATCTTGGGCAGCGTGTGGACCTTCAACATGTTCAACATCATCTACCTGGTGTC CGGCGGGGAGCCGGGCGGCGGCACCGACATCCTGGTGTCCGAGGCCTACCGTTGGGCCTTCCAGCGCAACGAGCAGTACG GCTTCGCGGCGGCGTACTCGGTCCTCATCTTCGTGGTGCTGCTGGTCTGGTCCGCCTTCACCAGGCGATTGATGCGGTCG TCCTCGGAGGTGATGGGATGA
Upstream 100 bases:
>100_bases TGCACCTGGCCCCCGTGGCGGACGCGCTGCACGTCTTCTCCAAGGACGGCGCGAAGGCGCTGCGCCATCCGGAGCAGCGC GCCGCGCTGGAGATCGCGTC
Downstream 100 bases:
>100_bases ACCGCCCCTCGCGCATGAAGATGGCCGCCATCCACGCCGGACTGACGCTGCTGTGCATGGCCACGCTCTACCCGGTGCTC TGGGTGGTGAAGATGGCGCT
Product: putative sugar ABC transporter permease/periplasmic sugar-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 726; Mature: 725
Protein sequence:
>726_residues MSRWLGLALLATALSAHAAPAAEKPLKLWHAYRGGEEMALVQATELFTSKTGVQVELLALPYDAYAAKLTNAIPHGVGPD VFIFNHERLLNFHAMHLVAPASGLAREDYFPNAVEALEVDGQVYGYPMSLKSLALYVNTKLVPQPPETTDALLAMLPALS DADAGRFGLAYESGDFYFHAGFLFGFGGELFDANGRASFDTQGMARSLAFVKDLQDQRFIPQEASGALVKSLFNDGRAAM IISGPWFAGEIAPQVDYRVVGLPAVSTTNIPIRPFLGVETAYVSARSERAEQAQALARFISLGEASRVRAMVGRQIPADV AAYTLKEVREDTLISSFREAARHATPMPNTLEMARVWEPMKLALRAVLQGGTAPQDAGALADRRYRALHRERPPDASPLP WLGLVGAMALGGSVWVLRRPAATLPFKQRYPDVAQAVAYITPAATGVALLVFVPFAVGLSLSLFHHEAGGYAFVGLANFV DILASRGYSITEPLSFYFTLAVTLLWAVVNVVLHVSIGLFLALLLKDPLLKLRGVYRVLLIIPWAVPNYITALMWKGMFH RQFGAINGLLVALDLEPVSWFTRFSTAFAANVVTNTWLGFPFMMVVALGALQSIPQELYEAAEVDGASKWTQFRRITLPL LRPAMLPAVILGSVWTFNMFNIIYLVSGGEPGGGTDILVSEAYRWAFQRNEQYGFAAAYSVLIFVVLLVWSAFTRRLMRS SSEVMG
Sequences:
>Translated_726_residues MSRWLGLALLATALSAHAAPAAEKPLKLWHAYRGGEEMALVQATELFTSKTGVQVELLALPYDAYAAKLTNAIPHGVGPD VFIFNHERLLNFHAMHLVAPASGLAREDYFPNAVEALEVDGQVYGYPMSLKSLALYVNTKLVPQPPETTDALLAMLPALS DADAGRFGLAYESGDFYFHAGFLFGFGGELFDANGRASFDTQGMARSLAFVKDLQDQRFIPQEASGALVKSLFNDGRAAM IISGPWFAGEIAPQVDYRVVGLPAVSTTNIPIRPFLGVETAYVSARSERAEQAQALARFISLGEASRVRAMVGRQIPADV AAYTLKEVREDTLISSFREAARHATPMPNTLEMARVWEPMKLALRAVLQGGTAPQDAGALADRRYRALHRERPPDASPLP WLGLVGAMALGGSVWVLRRPAATLPFKQRYPDVAQAVAYITPAATGVALLVFVPFAVGLSLSLFHHEAGGYAFVGLANFV DILASRGYSITEPLSFYFTLAVTLLWAVVNVVLHVSIGLFLALLLKDPLLKLRGVYRVLLIIPWAVPNYITALMWKGMFH RQFGAINGLLVALDLEPVSWFTRFSTAFAANVVTNTWLGFPFMMVVALGALQSIPQELYEAAEVDGASKWTQFRRITLPL LRPAMLPAVILGSVWTFNMFNIIYLVSGGEPGGGTDILVSEAYRWAFQRNEQYGFAAAYSVLIFVVLLVWSAFTRRLMRS SSEVMG >Mature_725_residues SRWLGLALLATALSAHAAPAAEKPLKLWHAYRGGEEMALVQATELFTSKTGVQVELLALPYDAYAAKLTNAIPHGVGPDV FIFNHERLLNFHAMHLVAPASGLAREDYFPNAVEALEVDGQVYGYPMSLKSLALYVNTKLVPQPPETTDALLAMLPALSD ADAGRFGLAYESGDFYFHAGFLFGFGGELFDANGRASFDTQGMARSLAFVKDLQDQRFIPQEASGALVKSLFNDGRAAMI ISGPWFAGEIAPQVDYRVVGLPAVSTTNIPIRPFLGVETAYVSARSERAEQAQALARFISLGEASRVRAMVGRQIPADVA AYTLKEVREDTLISSFREAARHATPMPNTLEMARVWEPMKLALRAVLQGGTAPQDAGALADRRYRALHRERPPDASPLPW LGLVGAMALGGSVWVLRRPAATLPFKQRYPDVAQAVAYITPAATGVALLVFVPFAVGLSLSLFHHEAGGYAFVGLANFVD ILASRGYSITEPLSFYFTLAVTLLWAVVNVVLHVSIGLFLALLLKDPLLKLRGVYRVLLIIPWAVPNYITALMWKGMFHR QFGAINGLLVALDLEPVSWFTRFSTAFAANVVTNTWLGFPFMMVVALGALQSIPQELYEAAEVDGASKWTQFRRITLPLL RPAMLPAVILGSVWTFNMFNIIYLVSGGEPGGGTDILVSEAYRWAFQRNEQYGFAAAYSVLIFVVLLVWSAFTRRLMRSS SEVMG
Specific function: Part of the binding-protein-dependent transport system for maltose; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side. Note=A substantial portion of it protrudes into the periplasmic space [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790465, Length=244, Percent_Identity=38.5245901639344, Blast_Score=165, Evalue=1e-41, Organism=Escherichia coli, GI1787570, Length=248, Percent_Identity=32.6612903225806, Blast_Score=113, Evalue=5e-26, Organism=Escherichia coli, GI1790466, Length=410, Percent_Identity=26.5853658536585, Blast_Score=101, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 79302; Mature: 79171
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRWLGLALLATALSAHAAPAAEKPLKLWHAYRGGEEMALVQATELFTSKTGVQVELLAL CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCEEEEEEE PYDAYAAKLTNAIPHGVGPDVFIFNHERLLNFHAMHLVAPASGLAREDYFPNAVEALEVD CCHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCC GQVYGYPMSLKSLALYVNTKLVPQPPETTDALLAMLPALSDADAGRFGLAYESGDFYFHA CEEEECCCCHHHEEEEEECEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEE GFLFGFGGELFDANGRASFDTQGMARSLAFVKDLQDQRFIPQEASGALVKSLFNDGRAAM EEHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEE IISGPWFAGEIAPQVDYRVVGLPAVSTTNIPIRPFLGVETAYVSARSERAEQAQALARFI EEECCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLGEASRVRAMVGRQIPADVAAYTLKEVREDTLISSFREAARHATPMPNTLEMARVWEPM HCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH KLALRAVLQGGTAPQDAGALADRRYRALHRERPPDASPLPWLGLVGAMALGGSVWVLRRP HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECC AATLPFKQRYPDVAQAVAYITPAATGVALLVFVPFAVGLSLSLFHHEAGGYAFVGLANFV CCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHHH DILASRGYSITEPLSFYFTLAVTLLWAVVNVVLHVSIGLFLALLLKDPLLKLRGVYRVLL HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH IIPWAVPNYITALMWKGMFHRQFGAINGLLVALDLEPVSWFTRFSTAFAANVVTNTWLGF HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH PFMMVVALGALQSIPQELYEAAEVDGASKWTQFRRITLPLLRPAMLPAVILGSVWTFNMF HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE NIIYLVSGGEPGGGTDILVSEAYRWAFQRNEQYGFAAAYSVLIFVVLLVWSAFTRRLMRS EEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SSEVMG HHHCCC >Mature Secondary Structure SRWLGLALLATALSAHAAPAAEKPLKLWHAYRGGEEMALVQATELFTSKTGVQVELLAL CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCEEEEEEE PYDAYAAKLTNAIPHGVGPDVFIFNHERLLNFHAMHLVAPASGLAREDYFPNAVEALEVD CCHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCC GQVYGYPMSLKSLALYVNTKLVPQPPETTDALLAMLPALSDADAGRFGLAYESGDFYFHA CEEEECCCCHHHEEEEEECEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEE GFLFGFGGELFDANGRASFDTQGMARSLAFVKDLQDQRFIPQEASGALVKSLFNDGRAAM EEHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEE IISGPWFAGEIAPQVDYRVVGLPAVSTTNIPIRPFLGVETAYVSARSERAEQAQALARFI EEECCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLGEASRVRAMVGRQIPADVAAYTLKEVREDTLISSFREAARHATPMPNTLEMARVWEPM HCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH KLALRAVLQGGTAPQDAGALADRRYRALHRERPPDASPLPWLGLVGAMALGGSVWVLRRP HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECC AATLPFKQRYPDVAQAVAYITPAATGVALLVFVPFAVGLSLSLFHHEAGGYAFVGLANFV CCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHHH DILASRGYSITEPLSFYFTLAVTLLWAVVNVVLHVSIGLFLALLLKDPLLKLRGVYRVLL HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH IIPWAVPNYITALMWKGMFHRQFGAINGLLVALDLEPVSWFTRFSTAFAANVVTNTWLGF HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH PFMMVVALGALQSIPQELYEAAEVDGASKWTQFRRITLPLLRPAMLPAVILGSVWTFNMF HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE NIIYLVSGGEPGGGTDILVSEAYRWAFQRNEQYGFAAAYSVLIFVVLLVWSAFTRRLMRS EEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SSEVMG HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2674653 [H]