| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is trxB [H]
Identifier: 108760871
GI number: 108760871
Start: 2291813
End: 2292775
Strand: Direct
Name: trxB [H]
Synonym: MXAN_1954
Alternate gene names: 108760871
Gene position: 2291813-2292775 (Clockwise)
Preceding gene: 108759979
Following gene: 108758343
Centisome position: 25.08
GC content: 67.39
Gene sequence:
>963_bases GTGGCGGAGGAGAAGATCAACAAGGTGACCATCATCGGCTCGGGGCCCGCGGGCTACACCGCGGCCATCTACGCCGCGCG CGCCAACCTGCAGCCGGTGGTGTTCGCCGGGGGCCCCACCCTGGAGCACCCGCAGCGGGTGCCGGGCGGCCAGCTCATGG TGACCACCGACGTGGAGAACTACCCGGGCTTTCCGGAGGCCATCACCGGCCCGGAGCTGATGGATCGCTTCCAGAAGCAG GCAGAGCGTTTCGGCACCACCATCCACATGGAGAACGTGGTGAAGGTGGACTTCTCCCAGCGCCCCTTCCTCATCCAGGG GGAGAGCGTCAGCTGCCGCTCGGAGACGGTCATCATCTCCACCGGCGCTACCGCCAAGTGGCTGGGCGTCAAGGGCGAGG ACACCTACAAGAACCGCGGCGTCTCCGCGTGCGCCACCTGCGACGGTGCCTTCTTCAAGAAGCAGGACGTGCTGGTGGTG GGCGGCGGTGACACGGCGATGGAGGAGGCGACGTACCTGGCGAAAATCGTCAACCACGTCACCCTCATCCACCGCCGCGA CACGCTGCGCGCCTCCAAGGTGATGCAGGAGCGCGCCCGCCAGAATCCGAAAATCTCCTTCATGTGGGACTCCGCGGTGG AGGAGGTCCTCGGCGACGCGAAGGGGATGAATGGCGCGGTGGTGCGCAACCTGAAGACGGGTGACAGCCAGCAGGTGAAG GCGACCGGCCTGTTCGTGGCCATTGGCCACACGCCCAACACGGAGCTGTTCCAGGGCGTGCTGGAGACGCACCAGGGCGG CTACCTCAAGACGGTGCCGGGCTCCACGCGCACCAACATCGAGGGCGTGTTCGCCTGCGGTGACGTGCAGGACCACTACT ACCGCCAGGCCATCACCGCGGCGGGCACGGGCTGCATGGCCGCCATCGACGCGGAGCGCTGGCTCATCGAGCACGGCGAG TAG
Upstream 100 bases:
>100_bases CAACCTTCTTGAGGACTGCGGCATCCATGAGGCCAGCTTCGTATCACGCGCCCGAGGCGCTCTGGTACCTTGGGGCCATC AACGAGATTTGGGAGGAGTC
Downstream 100 bases:
>100_bases TCCACCCGCTCGCGCGGCTCCGCTGAGCATTCCCAGGCCGGCCCCTTCCCGGGGCCGGCCTTTCCATTCCCGCGAAGGAC GCAGCAATCCCCATGAGCTC
Product: thioredoxin-disulfide reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MAEEKINKVTIIGSGPAGYTAAIYAARANLQPVVFAGGPTLEHPQRVPGGQLMVTTDVENYPGFPEAITGPELMDRFQKQ AERFGTTIHMENVVKVDFSQRPFLIQGESVSCRSETVIISTGATAKWLGVKGEDTYKNRGVSACATCDGAFFKKQDVLVV GGGDTAMEEATYLAKIVNHVTLIHRRDTLRASKVMQERARQNPKISFMWDSAVEEVLGDAKGMNGAVVRNLKTGDSQQVK ATGLFVAIGHTPNTELFQGVLETHQGGYLKTVPGSTRTNIEGVFACGDVQDHYYRQAITAAGTGCMAAIDAERWLIEHGE
Sequences:
>Translated_320_residues MAEEKINKVTIIGSGPAGYTAAIYAARANLQPVVFAGGPTLEHPQRVPGGQLMVTTDVENYPGFPEAITGPELMDRFQKQ AERFGTTIHMENVVKVDFSQRPFLIQGESVSCRSETVIISTGATAKWLGVKGEDTYKNRGVSACATCDGAFFKKQDVLVV GGGDTAMEEATYLAKIVNHVTLIHRRDTLRASKVMQERARQNPKISFMWDSAVEEVLGDAKGMNGAVVRNLKTGDSQQVK ATGLFVAIGHTPNTELFQGVLETHQGGYLKTVPGSTRTNIEGVFACGDVQDHYYRQAITAAGTGCMAAIDAERWLIEHGE >Mature_319_residues AEEKINKVTIIGSGPAGYTAAIYAARANLQPVVFAGGPTLEHPQRVPGGQLMVTTDVENYPGFPEAITGPELMDRFQKQA ERFGTTIHMENVVKVDFSQRPFLIQGESVSCRSETVIISTGATAKWLGVKGEDTYKNRGVSACATCDGAFFKKQDVLVVG GGDTAMEEATYLAKIVNHVTLIHRRDTLRASKVMQERARQNPKISFMWDSAVEEVLGDAKGMNGAVVRNLKTGDSQQVKA TGLFVAIGHTPNTELFQGVLETHQGGYLKTVPGSTRTNIEGVFACGDVQDHYYRQAITAAGTGCMAAIDAERWLIEHGE
Specific function: Component of the thioredoxin-thioredoxin reductase system which may be involved in biosynthesis of penicillins and cephalosporins and may be important in determining the thiol- disulfide redox balance [H]
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=323, Percent_Identity=50.4643962848297, Blast_Score=315, Evalue=2e-87, Organism=Escherichia coli, GI87081763, Length=332, Percent_Identity=33.433734939759, Blast_Score=151, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6320560, Length=315, Percent_Identity=48.2539682539683, Blast_Score=313, Evalue=3e-86, Organism=Saccharomyces cerevisiae, GI6321898, Length=315, Percent_Identity=46.6666666666667, Blast_Score=303, Evalue=3e-83,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 34626; Mature: 34494
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEKINKVTIIGSGPAGYTAAIYAARANLQPVVFAGGPTLEHPQRVPGGQLMVTTDVEN CCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCC YPGFPEAITGPELMDRFQKQAERFGTTIHMENVVKVDFSQRPFLIQGESVSCRSETVIIS CCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCEEEEECCCCCEEEECCCCCCCCCEEEEE TGATAKWLGVKGEDTYKNRGVSACATCDGAFFKKQDVLVVGGGDTAMEEATYLAKIVNHV CCCCEEEEECCCCCCHHHCCCEEEEECCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHH TLIHRRDTLRASKVMQERARQNPKISFMWDSAVEEVLGDAKGMNGAVVRNLKTGDSQQVK HEEECHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCEEE ATGLFVAIGHTPNTELFQGVLETHQGGYLKTVPGSTRTNIEGVFACGDVQDHYYRQAITA EEEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHH AGTGCMAAIDAERWLIEHGE CCCCEEEEECHHHHEEECCC >Mature Secondary Structure AEEKINKVTIIGSGPAGYTAAIYAARANLQPVVFAGGPTLEHPQRVPGGQLMVTTDVEN CCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCC YPGFPEAITGPELMDRFQKQAERFGTTIHMENVVKVDFSQRPFLIQGESVSCRSETVIIS CCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCEEEEECCCCCEEEECCCCCCCCCEEEEE TGATAKWLGVKGEDTYKNRGVSACATCDGAFFKKQDVLVVGGGDTAMEEATYLAKIVNHV CCCCEEEEECCCCCCHHHCCCEEEEECCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHH TLIHRRDTLRASKVMQERARQNPKISFMWDSAVEEVLGDAKGMNGAVVRNLKTGDSQQVK HEEECHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCEEE ATGLFVAIGHTPNTELFQGVLETHQGGYLKTVPGSTRTNIEGVFACGDVQDHYYRQAITA EEEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHH AGTGCMAAIDAERWLIEHGE CCCCEEEEECHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8349555; 8423136 [H]