| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760850
Identifier: 108760850
GI number: 108760850
Start: 2268514
End: 2270091
Strand: Direct
Name: 108760850
Synonym: MXAN_1934
Alternate gene names: NA
Gene position: 2268514-2270091 (Clockwise)
Preceding gene: 108761736
Following gene: 108760669
Centisome position: 24.82
GC content: 71.29
Gene sequence:
>1578_bases ATGTCGTTGCCCTCCCACGAGGTGGGATTCCACTCCCCGTCGGGCTCGGACCCAGGGCGGGCAGACGAACGCTTCACACC TTGCGTCCGGGAACGCGGGCGGGAAGAGTCGGTCGCGCCTGTGTCCGTCCCCCTCCCTGCCACGCCCGCTGATTCCATCC CGACACCCGAGCCCACGTCCCTGACGCCCGGGGCCACGCCCCAAGAGGCGCCGGTCCGGAACTGGATGCGCTGGGTGCTA GGGGCAGTGGCGCTGCTGCCTGGCCTCATCGCGGTGGTGCAGTTGGGCCGCATCCACCCGGATGAGGTGTACCAGTCGCT GGAGCCCGCCTGGTGGCGAGTCCACGGCTACGGCGTCCTGGCCTGGGAGTGGCATGACGGCCTCCGCAACTGGGCTGTGC CCGGCGTCCTGGCGGGCTTCCTCAAGCTGGCGGACCTGCTGGGCATCACCCATCCGCGGGCCTATCGCGTCGTGGTGGCC ATTCCGCAGGTGGCCTTGCACGCCTGGAGTCTCTGGGCCGCGTACCGCTTCGCCCAGCGCCGAGCGGGGACCGCGGGTGG CCTGCTGTCGACGTTGCTCGTGGGGCTCTACGGCCCACTGCTCGTCTTCGCGGGGCGCACCATGGCCGAGTCGATTTCCG CCTCGCTGCTCATCGTCGCCGTGGAGGCGCTGGACCGGAGAGCGCAGCTCTCAAGGGCAGGACTCGTGGGTGGCATGGCC CTGGGGCTGGCGGTGGTGGCCCGTTACCCGTCGGCCATCTTCGTCCTGGCGGCGCTGGTGTGGTTGGCGGCGGCGAGGCG GTGGCGACTGCTCGCCTTCACGTGCGCTGGAGGACTGGGCGTGGCGGTGGCGCTCGGCGCGCTGGACTGGGCGACGTGGG GCTCGCCGTTCCACTCCTTTATCGCCTATGCCCGCTTCAACGTCTTTTCGGGCAAGGCCGCGGCTCAGTTCGGAGCTGAC GCACCCAGCTTCTACGTGAAGCCGCTACTCACCGCCGTGCCGCTCTGGGCCTGGGCCGCCGTGCCCGTGGGAATCGCCGC GCTTCGCCAGCACCGCGCCCTGTCCCTGCCGCTGTGGTGCGCCGCCGTGTACACCGGCGTGCTCCTGGCCACCGCGCACA AGGAGGAGCGCTTCCTCTATCCCGGCCTGGTGCTGGGCGTGCTGGCCGCGGCGCCACCCGTGGCGGCGGGCCTCGTCCAG CTTGCTCGGCCAACCGGGCGGTGGGGCCTGGCCGGACTCGCGCTGGCCGCGAGCATGACCGCGGCCGCCTTCTTCCCTCC CGGGGACCTGCGGGCAGACCAGTTCCGCGCGATTGTCGCCGCCACCCGGGGCAATGCGCGGGGGCTGCTCATCGTCAATG AGGGCTTGTGGGGCTCGGGCGGCTACTTCTACCTGGGGAAGCGGATTCCCTGGCTCACCTGTGACTGGCCCCACGACGGC GCGTTCGAACGTGCGCTGCGGGACAGGACGTTCAACCGCGCCGTCACCTTCGAGGACCGCGCGCTCGCCGAGCTCCAGGC CGGCGGCTTCCAAATCGTCCGGAAGGTGGGCCGCGAGACGATTCTCTCCCGCGAGTAG
Upstream 100 bases:
>100_bases CTGTCCGGTCATGTCGTCGAACTTCTGTGGGCGCCATTTGCGGGCGAGAACGAGGTAGCTCATGGGGGGCGTCATCTAAA CACGGCGGCGTGAATGATCC
Downstream 100 bases:
>100_bases GGAAGGGGAGCGGCCAGCCCGCAAAGGCGAAGAGCCGGTGTCCTTGACAGGACACCGGCTCTTCAAAAGGACGGCCGGGA CACACGCGGAAGTACGCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MSLPSHEVGFHSPSGSDPGRADERFTPCVRERGREESVAPVSVPLPATPADSIPTPEPTSLTPGATPQEAPVRNWMRWVL GAVALLPGLIAVVQLGRIHPDEVYQSLEPAWWRVHGYGVLAWEWHDGLRNWAVPGVLAGFLKLADLLGITHPRAYRVVVA IPQVALHAWSLWAAYRFAQRRAGTAGGLLSTLLVGLYGPLLVFAGRTMAESISASLLIVAVEALDRRAQLSRAGLVGGMA LGLAVVARYPSAIFVLAALVWLAAARRWRLLAFTCAGGLGVAVALGALDWATWGSPFHSFIAYARFNVFSGKAAAQFGAD APSFYVKPLLTAVPLWAWAAVPVGIAALRQHRALSLPLWCAAVYTGVLLATAHKEERFLYPGLVLGVLAAAPPVAAGLVQ LARPTGRWGLAGLALAASMTAAAFFPPGDLRADQFRAIVAATRGNARGLLIVNEGLWGSGGYFYLGKRIPWLTCDWPHDG AFERALRDRTFNRAVTFEDRALAELQAGGFQIVRKVGRETILSRE
Sequences:
>Translated_525_residues MSLPSHEVGFHSPSGSDPGRADERFTPCVRERGREESVAPVSVPLPATPADSIPTPEPTSLTPGATPQEAPVRNWMRWVL GAVALLPGLIAVVQLGRIHPDEVYQSLEPAWWRVHGYGVLAWEWHDGLRNWAVPGVLAGFLKLADLLGITHPRAYRVVVA IPQVALHAWSLWAAYRFAQRRAGTAGGLLSTLLVGLYGPLLVFAGRTMAESISASLLIVAVEALDRRAQLSRAGLVGGMA LGLAVVARYPSAIFVLAALVWLAAARRWRLLAFTCAGGLGVAVALGALDWATWGSPFHSFIAYARFNVFSGKAAAQFGAD APSFYVKPLLTAVPLWAWAAVPVGIAALRQHRALSLPLWCAAVYTGVLLATAHKEERFLYPGLVLGVLAAAPPVAAGLVQ LARPTGRWGLAGLALAASMTAAAFFPPGDLRADQFRAIVAATRGNARGLLIVNEGLWGSGGYFYLGKRIPWLTCDWPHDG AFERALRDRTFNRAVTFEDRALAELQAGGFQIVRKVGRETILSRE >Mature_524_residues SLPSHEVGFHSPSGSDPGRADERFTPCVRERGREESVAPVSVPLPATPADSIPTPEPTSLTPGATPQEAPVRNWMRWVLG AVALLPGLIAVVQLGRIHPDEVYQSLEPAWWRVHGYGVLAWEWHDGLRNWAVPGVLAGFLKLADLLGITHPRAYRVVVAI PQVALHAWSLWAAYRFAQRRAGTAGGLLSTLLVGLYGPLLVFAGRTMAESISASLLIVAVEALDRRAQLSRAGLVGGMAL GLAVVARYPSAIFVLAALVWLAAARRWRLLAFTCAGGLGVAVALGALDWATWGSPFHSFIAYARFNVFSGKAAAQFGADA PSFYVKPLLTAVPLWAWAAVPVGIAALRQHRALSLPLWCAAVYTGVLLATAHKEERFLYPGLVLGVLAAAPPVAAGLVQL ARPTGRWGLAGLALAASMTAAAFFPPGDLRADQFRAIVAATRGNARGLLIVNEGLWGSGGYFYLGKRIPWLTCDWPHDGA FERALRDRTFNRAVTFEDRALAELQAGGFQIVRKVGRETILSRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI25153605, Length=304, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56319; Mature: 56188
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPSHEVGFHSPSGSDPGRADERFTPCVRERGREESVAPVSVPLPATPADSIPTPEPTS CCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCC LTPGATPQEAPVRNWMRWVLGAVALLPGLIAVVQLGRIHPDEVYQSLEPAWWRVHGYGVL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCEEE AWEWHDGLRNWAVPGVLAGFLKLADLLGITHPRAYRVVVAIPQVALHAWSLWAAYRFAQR EEEHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH RAGTAGGLLSTLLVGLYGPLLVFAGRTMAESISASLLIVAVEALDRRAQLSRAGLVGGMA HCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLAVVARYPSAIFVLAALVWLAAARRWRLLAFTCAGGLGVAVALGALDWATWGSPFHSF HHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHH IAYARFNVFSGKAAAQFGADAPSFYVKPLLTAVPLWAWAAVPVGIAALRQHRALSLPLWC HHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AAVYTGVLLATAHKEERFLYPGLVLGVLAAAPPVAAGLVQLARPTGRWGLAGLALAASMT HHHHHHHHHHHCCCCCCEECHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH AAAFFPPGDLRADQFRAIVAATRGNARGLLIVNEGLWGSGGYFYLGKRIPWLTCDWPHDG HHEECCCCCCCHHHHHHHHEEECCCCCEEEEEECCCCCCCCEEEECCCCCEEEECCCCCH AFERALRDRTFNRAVTFEDRALAELQAGGFQIVRKVGRETILSRE HHHHHHHHCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLPSHEVGFHSPSGSDPGRADERFTPCVRERGREESVAPVSVPLPATPADSIPTPEPTS CCCCCCCCCCCCCCCCCCCCCHHCCHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCC LTPGATPQEAPVRNWMRWVLGAVALLPGLIAVVQLGRIHPDEVYQSLEPAWWRVHGYGVL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCEEE AWEWHDGLRNWAVPGVLAGFLKLADLLGITHPRAYRVVVAIPQVALHAWSLWAAYRFAQR EEEHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH RAGTAGGLLSTLLVGLYGPLLVFAGRTMAESISASLLIVAVEALDRRAQLSRAGLVGGMA HCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLAVVARYPSAIFVLAALVWLAAARRWRLLAFTCAGGLGVAVALGALDWATWGSPFHSF HHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHH IAYARFNVFSGKAAAQFGADAPSFYVKPLLTAVPLWAWAAVPVGIAALRQHRALSLPLWC HHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AAVYTGVLLATAHKEERFLYPGLVLGVLAAAPPVAAGLVQLARPTGRWGLAGLALAASMT HHHHHHHHHHHCCCCCCEECHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH AAAFFPPGDLRADQFRAIVAATRGNARGLLIVNEGLWGSGGYFYLGKRIPWLTCDWPHDG HHEECCCCCCCHHHHHHHHEEECCCCCEEEEEECCCCCCCCEEEECCCCCEEEECCCCCH AFERALRDRTFNRAVTFEDRALAELQAGGFQIVRKVGRETILSRE HHHHHHHHCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA