| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is baeB [H]
Identifier: 108760697
GI number: 108760697
Start: 2899940
End: 2900596
Strand: Reverse
Name: baeB [H]
Synonym: MXAN_2490
Alternate gene names: 108760697
Gene position: 2900596-2899940 (Counterclockwise)
Preceding gene: 108761041
Following gene: 108761332
Centisome position: 31.74
GC content: 68.19
Gene sequence:
>657_bases ATGCGTGAACCGTACGTGCGGCAGCTCAAGCTCGGGCCCATGGACAACTTCGTCTACCTGGTGGGGCCCCGGGACTCAGA CGAGGTGGTGGTGGTGGACCCCGCGTGGGACGTGGACGCCATCGCGGAGGCGGTGAAGGCGGATGGAAAGCGCGTGGTGG GCGCGTTCGTCTCGCACTGTCACTTCGACCACATCAACGGACTGCCCGACCTGCTGTCGATGTGGGACGTGCCCGTGTAC GCGCAGCGGGAGGAGGTCCAGTTCTCGCCGGAGCTACGCGAGCTGGGCGGCGCGCTGCGGCCCGTGGGGCCCGGCGACGA CGTGCGCGTGGGCTCGCAGGTGTTCCATGCGCTGCACACGCCGGGGCACACGCCGGGCTCGCACTGCCTGCTGGCTGGCG ATGCGCTGGTCTCCGGGGACACCGTGTTCATCAACGGCTGCGGCCGGTGCGACTTGAAGGGCGGCAACCCGGAGGACATG TACCGCTCCCTGTCCCAGGTGCTGGCGAAGGTGCCCGACACGGCGAAGCTGTTTCCGGGCCACGACTACGCGGACGTCCC GGTGACGTCCATGGAGGCGGTGCGGAAGAAGAACCCGTACTTCGCCTTCGACAACGTGGATGCCTTCGTCGCGTTCCGAA TGCGGCCGAGGAAGTAG
Upstream 100 bases:
>100_bases GATCGCGAATCGTTCGTCCAGGGCCCGGAAAGAGGGAATCGGCCCGCGCCTTCAAACCCTGGACGTTAGAGTGGAGCCTG AAGCGGAGGAGGATATCGCG
Downstream 100 bases:
>100_bases CCGGGCCTGACATGCCGCGCGGCGGTGACCGGTGTCGAGCGTCCAACGGGCGTTCACACCGAGGTCACGTTTCCGGTGAG TGCGTGCCTGTCTATTGAAT
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MREPYVRQLKLGPMDNFVYLVGPRDSDEVVVVDPAWDVDAIAEAVKADGKRVVGAFVSHCHFDHINGLPDLLSMWDVPVY AQREEVQFSPELRELGGALRPVGPGDDVRVGSQVFHALHTPGHTPGSHCLLAGDALVSGDTVFINGCGRCDLKGGNPEDM YRSLSQVLAKVPDTAKLFPGHDYADVPVTSMEAVRKKNPYFAFDNVDAFVAFRMRPRK
Sequences:
>Translated_218_residues MREPYVRQLKLGPMDNFVYLVGPRDSDEVVVVDPAWDVDAIAEAVKADGKRVVGAFVSHCHFDHINGLPDLLSMWDVPVY AQREEVQFSPELRELGGALRPVGPGDDVRVGSQVFHALHTPGHTPGSHCLLAGDALVSGDTVFINGCGRCDLKGGNPEDM YRSLSQVLAKVPDTAKLFPGHDYADVPVTSMEAVRKKNPYFAFDNVDAFVAFRMRPRK >Mature_218_residues MREPYVRQLKLGPMDNFVYLVGPRDSDEVVVVDPAWDVDAIAEAVKADGKRVVGAFVSHCHFDHINGLPDLLSMWDVPVY AQREEVQFSPELRELGGALRPVGPGDDVRVGSQVFHALHTPGHTPGSHCLLAGDALVSGDTVFINGCGRCDLKGGNPEDM YRSLSQVLAKVPDTAKLFPGHDYADVPVTSMEAVRKKNPYFAFDNVDAFVAFRMRPRK
Specific function: Probably involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=200, Percent_Identity=30.5, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI21703352, Length=179, Percent_Identity=36.3128491620112, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI116642887, Length=179, Percent_Identity=36.3128491620112, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI14150041, Length=192, Percent_Identity=31.25, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI46361987, Length=210, Percent_Identity=30.952380952381, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI94538320, Length=178, Percent_Identity=26.4044943820225, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI94538322, Length=178, Percent_Identity=26.4044943820225, Blast_Score=74, Evalue=8e-14, Organism=Escherichia coli, GI1787158, Length=186, Percent_Identity=29.0322580645161, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786406, Length=170, Percent_Identity=28.8235294117647, Blast_Score=65, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17538952, Length=212, Percent_Identity=26.4150943396226, Blast_Score=77, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6324614, Length=214, Percent_Identity=24.2990654205607, Blast_Score=64, Evalue=1e-11, Organism=Drosophila melanogaster, GI221330176, Length=209, Percent_Identity=28.7081339712919, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI21356335, Length=188, Percent_Identity=30.3191489361702, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24667703, Length=188, Percent_Identity=30.3191489361702, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24667711, Length=188, Percent_Identity=30.3191489361702, Blast_Score=85, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 23959; Mature: 23959
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREPYVRQLKLGPMDNFVYLVGPRDSDEVVVVDPAWDVDAIAEAVKADGKRVVGAFVSHC CCCCCCHHEECCCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHH HFDHINGLPDLLSMWDVPVYAQREEVQFSPELRELGGALRPVGPGDDVRVGSQVFHALHT HHHHCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC PGHTPGSHCLLAGDALVSGDTVFINGCGRCDLKGGNPEDMYRSLSQVLAKVPDTAKLFPG CCCCCCCCEEEECCEEECCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCCCEECCC HDYADVPVTSMEAVRKKNPYFAFDNVDAFVAFRMRPRK CCCCCCCCHHHHHHHHCCCEEEECCCCEEEEEEECCCC >Mature Secondary Structure MREPYVRQLKLGPMDNFVYLVGPRDSDEVVVVDPAWDVDAIAEAVKADGKRVVGAFVSHC CCCCCCHHEECCCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHH HFDHINGLPDLLSMWDVPVYAQREEVQFSPELRELGGALRPVGPGDDVRVGSQVFHALHT HHHHCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC PGHTPGSHCLLAGDALVSGDTVFINGCGRCDLKGGNPEDMYRSLSQVLAKVPDTAKLFPG CCCCCCCCEEEECCEEECCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCCCEECCC HDYADVPVTSMEAVRKKNPYFAFDNVDAFVAFRMRPRK CCCCCCCCHHHHHHHHCCCEEEECCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA