Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108760596

Identifier: 108760596

GI number: 108760596

Start: 2140770

End: 2142578

Strand: Direct

Name: 108760596

Synonym: MXAN_1811

Alternate gene names: NA

Gene position: 2140770-2142578 (Clockwise)

Preceding gene: 108757862

Following gene: 108759730

Centisome position: 23.42

GC content: 71.75

Gene sequence:

>1809_bases
GTGCTGGCACTGGGGTGTTCCCGGCCGTGGAAGCGGGAAGACTCCAGGACGTGGGAGGGTTGCTGCCAGGGGGCTGACGC
GTGCCTTGCGCTGCTGCAGGAGCTCCACGGGCCCGACACAGGGGAGAAGTGGCTGCCGCCGGAGCAGGCGTGTGCGGCCT
GGAAACTGGGGCGCGAGGGAGAGGGCGTCGTCCCTCGGCTGATTCCGCTGCTTCGGCACCCAGAGCGTCGCGTGCGCGGC
GGTGCAGCGCAGGCGCTGGCGAATATGGGGGAGAAGGCCACGGGCGCCTTACCTGCGCTCATTGAGGCGTATGAGCGGGA
GCCCGGTGGGCTGGCCCTGCACGCGCTCTCCTCACTTGATGACGAGAGAGCAGCGCCAGCCATTGTGCGCCACCTCCTGG
AGTCGCCCACGTCGGCGCTGGAGCACCTCGGCCCGACATTGGCCCCGGTGCTGTTTGACGCGCTGGAGAACCCGGAGTCG
AGCTGGGAGGCGCTGGTGCTGGTGCGCCACGTCCTCTCCCGGCGAGCCTCCATGCACACGGAGACCTTCGTCCCGCGCCT
GCGGACGCTCCTCGCGCGGGAGCTGGAGGAGTCCACGCTGCGGCGCCCACCCGGGACGTCCTGCCCGTCGGCGCCTGCGC
CAGGCTGCGAGGCGGTTTTCGACGCATGCACCCCACGAGCGGCGTACGTGGCGTCCGTGCTGGCGGCCCACGCGCGCGAA
GGGGCGAAGGGCGAGCCCGAGGCGCTGCAGGCGCTACAGCGGGCGGACGTGCGCCTCACGCCCGTGGCGCTGCAGGCGCT
GGTGGCCTTCAGGAGTCCTGCTGCGGTGCCGGGCGTCCTTGAGCAGCTCGCCGTGCCTGAATGCCGCGCCCGGGCCCTTG
CGAGCCTCGTGTCCCTGGGGGACGTGGCGCGGCCAGCCGCGACGGAGCCGCTGCTGCGGCTGCTGGCCACGGGGAAGGAG
GGCTGGGAGCGCGCACGGGCCGCAGAGGCCCTTGGACGCGTGGGAGACGCAGCCGCCTTCGAGGCGCTGCGCCAGGCGGT
GGACGCGCCGCACAGCGAAGTCCAGGCCGCGGCGGTTGATGCGCTGGGCAGCTACGCCTTCCGGGAGCATGCGGAGGAGC
TGGGGCCGCTGCTCCAGCGGGTGGGGACGACGCACGCCTCGCCGGTGGCGCGGAGCCACGCGAGGTTGGCCATGCAAGGC
CTCGCCGAACAGGAGGTGCAGCATGCGGAGTCCATCGACTGCGCCCGCATTATTCCTGGACGTAGCGGGGGGTGGACGCT
GAATGAGGGACACACCTCTGTCCAGTTGCACTGGGACAAGCCGAAGGCGCCCCCACAGGGGAGTCCCTGCGCAGCCGTGC
CGGGTGGGGACTCCGCATCCGTCCTCGAAGCTATGGGGGAGGCGTGCCTCGTCGGATGGGACGACGGGGAGTTTGGGGGC
ACGCTGGAAGTGCATGAAGCCGGGCGGGTGACGGTGCTGGAGGAGCCCCGGGCCAACCCCCTGGTAGTCGTGCGGATGCA
CGACGCCCTCGTGGTTGTGGAGGGCCTCGCACACATGTATTTCGGGGCAGGGCGTCTGGTGCGTGTCGACGCCTCCGAGG
GGCGGTGGCGTGCCACGCCTTGGGTGACTCTCCCAGGCGCGCCGATGGCATACGCACTGGATGAAGCGGGGGACTTGGTG
GTGGGGACGACGGACCAGCGACTCGACGCATTCGTGTGTGGCCGGGCTGGCACCTTCGCACCCGCCCACGTGGTGCGCGT
CACGAGGGACGGGCGCCTGGCCCCCGTCGAGCCGGATGGACGGCACTGA

Upstream 100 bases:

>100_bases
GTCCCTTCCCAGTGAAGGGGGAATGAGAGGCGATGACATGGAGAGAGAGTTGAAGTCTGGGCGTCCCCGCTGGCTGACCG
GGCTCGTGTGCGTGGCGGTG

Downstream 100 bases:

>100_bases
CGCTACCGCGTGAGAAAGGGCGCCCCTCCTGGGATAGGAGGGGGCCTGTCGGGCGGGAAGGTTTCAGGCGCGCCGCGTCC
GCGAGCGGAACTCGCTGGCC

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MLALGCSRPWKREDSRTWEGCCQGADACLALLQELHGPDTGEKWLPPEQACAAWKLGREGEGVVPRLIPLLRHPERRVRG
GAAQALANMGEKATGALPALIEAYEREPGGLALHALSSLDDERAAPAIVRHLLESPTSALEHLGPTLAPVLFDALENPES
SWEALVLVRHVLSRRASMHTETFVPRLRTLLARELEESTLRRPPGTSCPSAPAPGCEAVFDACTPRAAYVASVLAAHARE
GAKGEPEALQALQRADVRLTPVALQALVAFRSPAAVPGVLEQLAVPECRARALASLVSLGDVARPAATEPLLRLLATGKE
GWERARAAEALGRVGDAAAFEALRQAVDAPHSEVQAAAVDALGSYAFREHAEELGPLLQRVGTTHASPVARSHARLAMQG
LAEQEVQHAESIDCARIIPGRSGGWTLNEGHTSVQLHWDKPKAPPQGSPCAAVPGGDSASVLEAMGEACLVGWDDGEFGG
TLEVHEAGRVTVLEEPRANPLVVVRMHDALVVVEGLAHMYFGAGRLVRVDASEGRWRATPWVTLPGAPMAYALDEAGDLV
VGTTDQRLDAFVCGRAGTFAPAHVVRVTRDGRLAPVEPDGRH

Sequences:

>Translated_602_residues
MLALGCSRPWKREDSRTWEGCCQGADACLALLQELHGPDTGEKWLPPEQACAAWKLGREGEGVVPRLIPLLRHPERRVRG
GAAQALANMGEKATGALPALIEAYEREPGGLALHALSSLDDERAAPAIVRHLLESPTSALEHLGPTLAPVLFDALENPES
SWEALVLVRHVLSRRASMHTETFVPRLRTLLARELEESTLRRPPGTSCPSAPAPGCEAVFDACTPRAAYVASVLAAHARE
GAKGEPEALQALQRADVRLTPVALQALVAFRSPAAVPGVLEQLAVPECRARALASLVSLGDVARPAATEPLLRLLATGKE
GWERARAAEALGRVGDAAAFEALRQAVDAPHSEVQAAAVDALGSYAFREHAEELGPLLQRVGTTHASPVARSHARLAMQG
LAEQEVQHAESIDCARIIPGRSGGWTLNEGHTSVQLHWDKPKAPPQGSPCAAVPGGDSASVLEAMGEACLVGWDDGEFGG
TLEVHEAGRVTVLEEPRANPLVVVRMHDALVVVEGLAHMYFGAGRLVRVDASEGRWRATPWVTLPGAPMAYALDEAGDLV
VGTTDQRLDAFVCGRAGTFAPAHVVRVTRDGRLAPVEPDGRH
>Mature_602_residues
MLALGCSRPWKREDSRTWEGCCQGADACLALLQELHGPDTGEKWLPPEQACAAWKLGREGEGVVPRLIPLLRHPERRVRG
GAAQALANMGEKATGALPALIEAYEREPGGLALHALSSLDDERAAPAIVRHLLESPTSALEHLGPTLAPVLFDALENPES
SWEALVLVRHVLSRRASMHTETFVPRLRTLLARELEESTLRRPPGTSCPSAPAPGCEAVFDACTPRAAYVASVLAAHARE
GAKGEPEALQALQRADVRLTPVALQALVAFRSPAAVPGVLEQLAVPECRARALASLVSLGDVARPAATEPLLRLLATGKE
GWERARAAEALGRVGDAAAFEALRQAVDAPHSEVQAAAVDALGSYAFREHAEELGPLLQRVGTTHASPVARSHARLAMQG
LAEQEVQHAESIDCARIIPGRSGGWTLNEGHTSVQLHWDKPKAPPQGSPCAAVPGGDSASVLEAMGEACLVGWDDGEFGG
TLEVHEAGRVTVLEEPRANPLVVVRMHDALVVVEGLAHMYFGAGRLVRVDASEGRWRATPWVTLPGAPMAYALDEAGDLV
VGTTDQRLDAFVCGRAGTFAPAHVVRVTRDGRLAPVEPDGRH

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63957; Mature: 63957

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALGCSRPWKREDSRTWEGCCQGADACLALLQELHGPDTGEKWLPPEQACAAWKLGREG
CCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
EGVVPRLIPLLRHPERRVRGGAAQALANMGEKATGALPALIEAYEREPGGLALHALSSLD
CCCHHHHHHHHHCCHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHHCCCCCEEHHHHHHCC
DERAAPAIVRHLLESPTSALEHLGPTLAPVLFDALENPESSWEALVLVRHVLSRRASMHT
HHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ETFVPRLRTLLARELEESTLRRPPGTSCPSAPAPGCEAVFDACTPRAAYVASVLAAHARE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHC
GAKGEPEALQALQRADVRLTPVALQALVAFRSPAAVPGVLEQLAVPECRARALASLVSLG
CCCCCHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
DVARPAATEPLLRLLATGKEGWERARAAEALGRVGDAAAFEALRQAVDAPHSEVQAAAVD
HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH
ALGSYAFREHAEELGPLLQRVGTTHASPVARSHARLAMQGLAEQEVQHAESIDCARIIPG
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
RSGGWTLNEGHTSVQLHWDKPKAPPQGSPCAAVPGGDSASVLEAMGEACLVGWDDGEFGG
CCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCC
TLEVHEAGRVTVLEEPRANPLVVVRMHDALVVVEGLAHMYFGAGRLVRVDASEGRWRATP
EEEEECCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCEECCC
WVTLPGAPMAYALDEAGDLVVGTTDQRLDAFVCGRAGTFAPAHVVRVTRDGRLAPVEPDG
EEECCCCCHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCC
RH
CC
>Mature Secondary Structure
MLALGCSRPWKREDSRTWEGCCQGADACLALLQELHGPDTGEKWLPPEQACAAWKLGREG
CCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
EGVVPRLIPLLRHPERRVRGGAAQALANMGEKATGALPALIEAYEREPGGLALHALSSLD
CCCHHHHHHHHHCCHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHHCCCCCEEHHHHHHCC
DERAAPAIVRHLLESPTSALEHLGPTLAPVLFDALENPESSWEALVLVRHVLSRRASMHT
HHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ETFVPRLRTLLARELEESTLRRPPGTSCPSAPAPGCEAVFDACTPRAAYVASVLAAHARE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHC
GAKGEPEALQALQRADVRLTPVALQALVAFRSPAAVPGVLEQLAVPECRARALASLVSLG
CCCCCHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
DVARPAATEPLLRLLATGKEGWERARAAEALGRVGDAAAFEALRQAVDAPHSEVQAAAVD
HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH
ALGSYAFREHAEELGPLLQRVGTTHASPVARSHARLAMQGLAEQEVQHAESIDCARIIPG
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
RSGGWTLNEGHTSVQLHWDKPKAPPQGSPCAAVPGGDSASVLEAMGEACLVGWDDGEFGG
CCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCC
TLEVHEAGRVTVLEEPRANPLVVVRMHDALVVVEGLAHMYFGAGRLVRVDASEGRWRATP
EEEEECCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCEECCC
WVTLPGAPMAYALDEAGDLVVGTTDQRLDAFVCGRAGTFAPAHVVRVTRDGRLAPVEPDG
EEECCCCCHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCC
RH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA