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The map label for this gene is carD [H]

Identifier: 108760592

GI number: 108760592

Start: 6986642

End: 6987592

Strand: Direct

Name: carD [H]

Synonym: MXAN_5622

Alternate gene names: 108760592

Gene position: 6986642-6987592 (Clockwise)

Preceding gene: 108761391

Following gene: 108759309

Centisome position: 76.44

GC content: 70.45

Gene sequence:

>951_bases
ATGCCTGAAGGGTCCGCGTCACTCCAGCTCGCGGTTGGCGACCGGGTCGTCTATCCGAACCAGGGGGTCTGCCGCGTCTC
CGCCATCGATGTGAAGGAAGTGGCGGGACAGAAGCTCACCTTCGTCACGATGCGCCGCGAAGAGGATGGCGCCGTCGTGA
TGGTCCCCGAGGGCAAGGTGCTCGCCATCGGCGTGCGCAAGGTCGCATCCGCCGAGGACGTGGAGGCCATCTTCACCTTC
CTCCGCTCGGACAGCGACAAGGCCGACCTCGACTGGAAGCAGCGAGCCCGCACCAACCTGGACCGGATGACCCAAGGCGG
CATCATGGGTCTGGCCGAGGTGGTGAAGGGGCTCCAGGTTCTCAGTGAGCTGCGCCCGTTGCCGACCAAGGAGCGCGAGC
TCTACGACAATGCCCGGCACCTGCTGGTGACGGAGGTCGCCGCCGCGCTGGGCACTGCCGAGGTCAACGCCGAGGACGCC
ATCGACATCGTCCTCTTCCCGCCCGGCCGCGAGCGCCCCAAGCGCACCGCAGCCGAGTTCCAGCGCGAGGAAGGCGACCT
GGACCTGGACAGCGATTTGCTGGGCCTGGACAGCGACCTGGACCTGCCGTCCGACGAGGAGCCCTCCGAGCCGTCCGAGG
AGGAGTCCAGCGAGGAAGGCGAGTCCGAGGAGGCCGCGTCCTCCGAGGAGAGCGCCCCCAAGAAGCGCGGCCGTCCGCCC
AAGGCCAAGACGGAGGCGCCCGAGGGCGCCGAGCCCCCTGCTCCGAAGAAGCGCGGCCGTCCGCCCAAGCCCAAGCCGGA
AGCCACGGCGGAGGGCGCCGAGCCCCCTGCTCCGAAGAAACGTGGCCGCCCGCCCAAGCCCAAGCCGCCCGAGGTGGAAG
GCGCCGCGCCCGCCGCGCCGAAGAAGCGCGGCCGTCCGCCCAAGGTCAAGCCGCCCGAGGGTGAGAGCTGA

Upstream 100 bases:

>100_bases
GCGGCAATCCACCGGTAAACTCGTGGCGTCCGACGTGGCTCGGTGCTAAGCCCAGGCCTGTTCCGACGTTCAGCCCACCA
ACCTCACCCGTGAGGGGGAC

Downstream 100 bases:

>100_bases
CAGCCCCATGGACCGACGGGCCCCTGCACATGGGGCCCTTCCGCCGAGGTGACGCCCCGTGATTCGCGTCGTGACGCTGG
ACCCCTTCGACGACAAGCAG

Product: transcriptional regulator CarD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MPEGSASLQLAVGDRVVYPNQGVCRVSAIDVKEVAGQKLTFVTMRREEDGAVVMVPEGKVLAIGVRKVASAEDVEAIFTF
LRSDSDKADLDWKQRARTNLDRMTQGGIMGLAEVVKGLQVLSELRPLPTKERELYDNARHLLVTEVAAALGTAEVNAEDA
IDIVLFPPGRERPKRTAAEFQREEGDLDLDSDLLGLDSDLDLPSDEEPSEPSEEESSEEGESEEAASSEESAPKKRGRPP
KAKTEAPEGAEPPAPKKRGRPPKPKPEATAEGAEPPAPKKRGRPPKPKPPEVEGAAPAAPKKRGRPPKVKPPEGES

Sequences:

>Translated_316_residues
MPEGSASLQLAVGDRVVYPNQGVCRVSAIDVKEVAGQKLTFVTMRREEDGAVVMVPEGKVLAIGVRKVASAEDVEAIFTF
LRSDSDKADLDWKQRARTNLDRMTQGGIMGLAEVVKGLQVLSELRPLPTKERELYDNARHLLVTEVAAALGTAEVNAEDA
IDIVLFPPGRERPKRTAAEFQREEGDLDLDSDLLGLDSDLDLPSDEEPSEPSEEESSEEGESEEAASSEESAPKKRGRPP
KAKTEAPEGAEPPAPKKRGRPPKPKPEATAEGAEPPAPKKRGRPPKPKPPEVEGAAPAAPKKRGRPPKVKPPEGES
>Mature_315_residues
PEGSASLQLAVGDRVVYPNQGVCRVSAIDVKEVAGQKLTFVTMRREEDGAVVMVPEGKVLAIGVRKVASAEDVEAIFTFL
RSDSDKADLDWKQRARTNLDRMTQGGIMGLAEVVKGLQVLSELRPLPTKERELYDNARHLLVTEVAAALGTAEVNAEDAI
DIVLFPPGRERPKRTAAEFQREEGDLDLDSDLLGLDSDLDLPSDEEPSEPSEEESSEEGESEEAASSEESAPKKRGRPPK
AKTEAPEGAEPPAPKKRGRPPKPKPEATAEGAEPPAPKKRGRPPKPKPPEVEGAAPAAPKKRGRPPKVKPPEGES

Specific function: Unknown

COG id: COG1329

COG function: function code K; Transcriptional regulators, similar to M. xanthus CarD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003711 [H]

Pfam domain/function: PF02559 CarD_TRCF [H]

EC number: NA

Molecular weight: Translated: 34030; Mature: 33898

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEGSASLQLAVGDRVVYPNQGVCRVSAIDVKEVAGQKLTFVTMRREEDGAVVMVPEGKV
CCCCCCEEEEEECCEEECCCCCEEEEEECCHHHHCCCEEEEEEEEECCCCCEEEECCCCE
LAIGVRKVASAEDVEAIFTFLRSDSDKADLDWKQRARTNLDRMTQGGIMGLAEVVKGLQV
EEEEHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LSELRPLPTKERELYDNARHLLVTEVAAALGTAEVNAEDAIDIVLFPPGRERPKRTAAEF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHH
QREEGDLDLDSDLLGLDSDLDLPSDEEPSEPSEEESSEEGESEEAASSEESAPKKRGRPP
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCCHHHCHHHCCCCC
KAKTEAPEGAEPPAPKKRGRPPKPKPEATAEGAEPPAPKKRGRPPKPKPPEVEGAAPAAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KKRGRPPKVKPPEGES
HHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PEGSASLQLAVGDRVVYPNQGVCRVSAIDVKEVAGQKLTFVTMRREEDGAVVMVPEGKV
CCCCCEEEEEECCEEECCCCCEEEEEECCHHHHCCCEEEEEEEEECCCCCEEEECCCCE
LAIGVRKVASAEDVEAIFTFLRSDSDKADLDWKQRARTNLDRMTQGGIMGLAEVVKGLQV
EEEEHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LSELRPLPTKERELYDNARHLLVTEVAAALGTAEVNAEDAIDIVLFPPGRERPKRTAAEF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHH
QREEGDLDLDSDLLGLDSDLDLPSDEEPSEPSEEESSEEGESEEAASSEESAPKKRGRPP
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCCHHHCHHHCCCCC
KAKTEAPEGAEPPAPKKRGRPPKPKPEATAEGAEPPAPKKRGRPPKPKPPEVEGAAPAAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KKRGRPPKVKPPEGES
HHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]