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The map label for this gene is ynfA [C]

Identifier: 108760580

GI number: 108760580

Start: 5440712

End: 5441041

Strand: Reverse

Name: ynfA [C]

Synonym: MXAN_4406

Alternate gene names: 108760580

Gene position: 5441041-5440712 (Counterclockwise)

Preceding gene: 108757058

Following gene: 108757560

Centisome position: 59.53

GC content: 68.48

Gene sequence:

>330_bases
GTGAATCTGCTGTACGCCTTCGGGCTCTTCGTTCTCACCGCGGTGGCCGAGGTGGTGGGCTGCTATCTGCCCTACCTCTG
GCTCCGTCAGGGGAAGTCACCCCTGCTCCTCGTGCCCGCGGCGGGGAGCCTCGCCGTCTTCGCATGGCTGCTCACGCTGC
ATCCGACAGGCGCGGCCCGCACCTATGCGGCTTACGGCGGGGTGTACATCGCCGTGGCGCTCGTCTGGCTGTGGCTCGTG
GAAGGGGAGCGACCCACGACGTGGGACCTCGTGGGCGCGCTCGTCGCCATCCTGGGGATGGCGATCATCGTGCTCGGACC
TCGCAGGTAG

Upstream 100 bases:

>100_bases
TCGGCGCATGGACTCGGACACGCGGCAACACCTCGGCAACCTCCACGGAACGGCAGCGCCAGCGAAGGCCTGACCCGCGC
GTCACGAAAGGTTCCTCACC

Downstream 100 bases:

>100_bases
CGAGGGCCTGCTTCAACATGCCGCGCGGGACGGACTACGCGGCCCAGCGCTGGAGGCTGCCCTCCACGTACTTCGCCCGG
CAGGCGCGCCGCTGGACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MNLLYAFGLFVLTAVAEVVGCYLPYLWLRQGKSPLLLVPAAGSLAVFAWLLTLHPTGAARTYAAYGGVYIAVALVWLWLV
EGERPTTWDLVGALVAILGMAIIVLGPRR

Sequences:

>Translated_109_residues
MNLLYAFGLFVLTAVAEVVGCYLPYLWLRQGKSPLLLVPAAGSLAVFAWLLTLHPTGAARTYAAYGGVYIAVALVWLWLV
EGERPTTWDLVGALVAILGMAIIVLGPRR
>Mature_109_residues
MNLLYAFGLFVLTAVAEVVGCYLPYLWLRQGKSPLLLVPAAGSLAVFAWLLTLHPTGAARTYAAYGGVYIAVALVWLWLV
EGERPTTWDLVGALVAILGMAIIVLGPRR

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=101, Percent_Identity=55.4455445544555, Blast_Score=109, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4406_MYXXD (Q1D445)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_632578.1
- STRING:   Q1D445
- GeneID:   4104275
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_4406
- TIGR:   MXAN_4406
- eggNOG:   COG1742
- HOGENOM:   HBG313568
- OMA:   MAILWLW
- PhylomeDB:   Q1D445
- BioCyc:   MXAN246197:MXAN_4406-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11772; Mature: 11772

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x4076f2c4)-; HASH(0x19cd3048)-; HASH(0x1cf049b4)-; HASH(0x1915622c)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLYAFGLFVLTAVAEVVGCYLPYLWLRQGKSPLLLVPAAGSLAVFAWLLTLHPTGAAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCHH
TYAAYGGVYIAVALVWLWLVEGERPTTWDLVGALVAILGMAIIVLGPRR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MNLLYAFGLFVLTAVAEVVGCYLPYLWLRQGKSPLLLVPAAGSLAVFAWLLTLHPTGAAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCHH
TYAAYGGVYIAVALVWLWLVEGERPTTWDLVGALVAILGMAIIVLGPRR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA