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The map label for this gene is opuCB [H]

Identifier: 108760529

GI number: 108760529

Start: 688025

End: 689521

Strand: Direct

Name: opuCB [H]

Synonym: MXAN_0597

Alternate gene names: 108760529

Gene position: 688025-689521 (Clockwise)

Preceding gene: 108763422

Following gene: 108761754

Centisome position: 7.53

GC content: 69.54

Gene sequence:

>1497_bases
GTGTTGCTGCTCGTGGGGGCGTGTGGCGGGGCGTCCTCGTCTGGGGATGGCGTGCCCCAGGTGCGCGTGGGCTCCAAGAA
GTTCACCGAGTCCGTCATCTTGGGTGAAGCGGTGACGCAGCTCGCGCGGAGCACCGGTGCGCGGGTCACGCATCGGCGGG
AGTTGGGCGGTACCGCCGTGCTCTGGGAGGCGCTGCGCCGGGGCGAACTCGACGTGTACCCCGAGTACACGGGCACGTTG
CGACAGGAGTTGCTGTCCGGGCGCCACCTGCCGGACGACGCGGCGCTGCGTGCGGCCCTGGCTGAGTCTGGGCTTCGGAT
GAGCGAGCCGCTGGGCTTCAACAACACGTATGCACTGGGCATGAAGGAAGCGGAGGCCGAGCGGCTGGGCATTCGCCGCA
TCTCTGATTTGCGTGCCCATCCTTCGCTGCGCTTCGGTTTCAGCAATGAGTTCATGGACCGCGCGGATGGCTGGCCCGCC
TTGCGAGACAGCTACCGGCTGCCGCAGCGGGACGTGCGCGGGCTGGACCATGATTTGGCGTACCGGGGCATGGAGAGCGG
GTCGCTCCAGCTCACGGACCTGTACTCCACTGATGCGGAGATTGAGGCCTATGGGTTGCGTGTGCTGGAGGACGACCTGC
GCCACTTCCCCGCGTATGACGCGGTGCTGCTGTATCGCGACGACCTGGAGGCGCGGGCGCCCGAGGCCCTGGCCGCGATG
CTGCGTCTGGAAGGCCACGTGTCCGAGGCGGACATGGTGAAGCTCAACGCGCTGGCCCGGCTGGAGCGCGTGTCGGAGGG
CCGCGTGGCGTCGGGTTTCCTCGCCACGGCGCTGGGGGTCACTTCGGAAGTGCGCGGGGACGGGCTGGCTTCTCGCGTGT
GGAAGCGGACGCGTGAGCACCTGTTCCTGGTGGGGGTGTCGCTGCTGGCGGCGATGGCGCTCGCGGTGCCCTTGGGCGTG
CTGGCCGCGCGACGGCCTCGGCTGGGGCGCGGTGTGCTGGGGCTGACGGGGGTCATCCAGACGGTGCCGTCGCTGGCGCT
GCTGGTGGTGATGATTCCGCTGCTGGGAATCGGCTCACGTCCGGCGATTGCCGCGCTGTTCCTCTACAGCCTGTTGCCCA
TTGTCCGGAACACAGCGGCCGGGCTCGCGGGAATCCCTCCCGAGGTTCGCGAGTCCGCGGAGGCGCTGGGCCTGCCCGCG
CTGGCGCGGCTGTGGCGCATCGAATTGCCCATGGCGGCGCCGTCCATCCTCGCGGGCATCCAGACGGCCGCGGTCATCAA
CGTGGGCACTGCCACGCTGGGCGCGCTGGTGGGGGCAGGGGGCTACGGTCAGCCGATTCTCACGGGCATCCGGTTGGATG
ACGTGCGGCTCATCTTGGAGGGAGCGATTCCCGCAGCCGCGCTGGCACTGCTCGCCAGTGGCCTGTTCGACGCCGTGGAG
CGTGTGGTGGTGCCTCGAGGGCTTCGGTTGGGCACTGCGGTGCGTTCGACGCGTTAG

Upstream 100 bases:

>100_bases
AGGCACGGCCCGCGGATGACTTCGTCACCCGGTTCATCCAGGCGCAGCGGCCTCTGCCTGGCGGTGGGCTGGGAGGCGCG
GCGTGAGGGGGTGGCTCCTG

Downstream 100 bases:

>100_bases
TCTTGCTCGTCGAGCCAGAAGAATTCGTCTCCGCTCGCGAGAGCACGCTCAAGAAAGTCGCTGAATGAGTCAGCGATCTT
CCGAACTTCACGGGGGTACG

Product: glycine betaine/L-proline ABC transporter permease and substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MLLLVGACGGASSSGDGVPQVRVGSKKFTESVILGEAVTQLARSTGARVTHRRELGGTAVLWEALRRGELDVYPEYTGTL
RQELLSGRHLPDDAALRAALAESGLRMSEPLGFNNTYALGMKEAEAERLGIRRISDLRAHPSLRFGFSNEFMDRADGWPA
LRDSYRLPQRDVRGLDHDLAYRGMESGSLQLTDLYSTDAEIEAYGLRVLEDDLRHFPAYDAVLLYRDDLEARAPEALAAM
LRLEGHVSEADMVKLNALARLERVSEGRVASGFLATALGVTSEVRGDGLASRVWKRTREHLFLVGVSLLAAMALAVPLGV
LAARRPRLGRGVLGLTGVIQTVPSLALLVVMIPLLGIGSRPAIAALFLYSLLPIVRNTAAGLAGIPPEVRESAEALGLPA
LARLWRIELPMAAPSILAGIQTAAVINVGTATLGALVGAGGYGQPILTGIRLDDVRLILEGAIPAAALALLASGLFDAVE
RVVVPRGLRLGTAVRSTR

Sequences:

>Translated_498_residues
MLLLVGACGGASSSGDGVPQVRVGSKKFTESVILGEAVTQLARSTGARVTHRRELGGTAVLWEALRRGELDVYPEYTGTL
RQELLSGRHLPDDAALRAALAESGLRMSEPLGFNNTYALGMKEAEAERLGIRRISDLRAHPSLRFGFSNEFMDRADGWPA
LRDSYRLPQRDVRGLDHDLAYRGMESGSLQLTDLYSTDAEIEAYGLRVLEDDLRHFPAYDAVLLYRDDLEARAPEALAAM
LRLEGHVSEADMVKLNALARLERVSEGRVASGFLATALGVTSEVRGDGLASRVWKRTREHLFLVGVSLLAAMALAVPLGV
LAARRPRLGRGVLGLTGVIQTVPSLALLVVMIPLLGIGSRPAIAALFLYSLLPIVRNTAAGLAGIPPEVRESAEALGLPA
LARLWRIELPMAAPSILAGIQTAAVINVGTATLGALVGAGGYGQPILTGIRLDDVRLILEGAIPAAALALLASGLFDAVE
RVVVPRGLRLGTAVRSTR
>Mature_498_residues
MLLLVGACGGASSSGDGVPQVRVGSKKFTESVILGEAVTQLARSTGARVTHRRELGGTAVLWEALRRGELDVYPEYTGTL
RQELLSGRHLPDDAALRAALAESGLRMSEPLGFNNTYALGMKEAEAERLGIRRISDLRAHPSLRFGFSNEFMDRADGWPA
LRDSYRLPQRDVRGLDHDLAYRGMESGSLQLTDLYSTDAEIEAYGLRVLEDDLRHFPAYDAVLLYRDDLEARAPEALAAM
LRLEGHVSEADMVKLNALARLERVSEGRVASGFLATALGVTSEVRGDGLASRVWKRTREHLFLVGVSLLAAMALAVPLGV
LAARRPRLGRGVLGLTGVIQTVPSLALLVVMIPLLGIGSRPAIAALFLYSLLPIVRNTAAGLAGIPPEVRESAEALGLPA
LARLWRIELPMAAPSILAGIQTAAVINVGTATLGALVGAGGYGQPILTGIRLDDVRLILEGAIPAAALALLASGLFDAVE
RVVVPRGLRLGTAVRSTR

Specific function: Involved in a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine and choline; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788451, Length=195, Percent_Identity=38.4615384615385, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1788449, Length=181, Percent_Identity=39.2265193370166, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1789033, Length=171, Percent_Identity=29.8245614035088, Blast_Score=89, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 53067; Mature: 53067

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLVGACGGASSSGDGVPQVRVGSKKFTESVILGEAVTQLARSTGARVTHRRELGGTAV
CEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHH
LWEALRRGELDVYPEYTGTLRQELLSGRHLPDDAALRAALAESGLRMSEPLGFNNTYALG
HHHHHHCCCCEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
MKEAEAERLGIRRISDLRAHPSLRFGFSNEFMDRADGWPALRDSYRLPQRDVRGLDHDLA
CCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCCCHHHHCCCCCHHHHCCCCHHHH
YRGMESGSLQLTDLYSTDAEIEAYGLRVLEDDLRHFPAYDAVLLYRDDLEARAPEALAAM
HCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHH
LRLEGHVSEADMVKLNALARLERVSEGRVASGFLATALGVTSEVRGDGLASRVWKRTREH
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LFLVGVSLLAAMALAVPLGVLAARRPRLGRGVLGLTGVIQTVPSLALLVVMIPLLGIGSR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAIAALFLYSLLPIVRNTAAGLAGIPPEVRESAEALGLPALARLWRIELPMAAPSILAGI
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHH
QTAAVINVGTATLGALVGAGGYGQPILTGIRLDDVRLILEGAIPAAALALLASGLFDAVE
HHHHHEECCHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RVVVPRGLRLGTAVRSTR
HHHHCCCCHHCCHHHCCC
>Mature Secondary Structure
MLLLVGACGGASSSGDGVPQVRVGSKKFTESVILGEAVTQLARSTGARVTHRRELGGTAV
CEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHH
LWEALRRGELDVYPEYTGTLRQELLSGRHLPDDAALRAALAESGLRMSEPLGFNNTYALG
HHHHHHCCCCEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
MKEAEAERLGIRRISDLRAHPSLRFGFSNEFMDRADGWPALRDSYRLPQRDVRGLDHDLA
CCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCCCHHHHCCCCCHHHHCCCCHHHH
YRGMESGSLQLTDLYSTDAEIEAYGLRVLEDDLRHFPAYDAVLLYRDDLEARAPEALAAM
HCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHH
LRLEGHVSEADMVKLNALARLERVSEGRVASGFLATALGVTSEVRGDGLASRVWKRTREH
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LFLVGVSLLAAMALAVPLGVLAARRPRLGRGVLGLTGVIQTVPSLALLVVMIPLLGIGSR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAIAALFLYSLLPIVRNTAAGLAGIPPEVRESAEALGLPALARLWRIELPMAAPSILAGI
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHH
QTAAVINVGTATLGALVGAGGYGQPILTGIRLDDVRLILEGAIPAAALALLASGLFDAVE
HHHHHEECCHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RVVVPRGLRLGTAVRSTR
HHHHCCCCHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]