| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760476
Identifier: 108760476
GI number: 108760476
Start: 3251570
End: 3252349
Strand: Reverse
Name: 108760476
Synonym: MXAN_2794
Alternate gene names: NA
Gene position: 3252349-3251570 (Counterclockwise)
Preceding gene: 108760219
Following gene: 108757557
Centisome position: 35.58
GC content: 65.64
Gene sequence:
>780_bases ATGAGCGACGAGATTTCCGGTCGGGGCGACCCATTGAAATCACTGCAGTTGCTATGGGGACGAACCGAGGCACCGAAGCG CGGCCCGAAGGCGAAGGCCAGCGTCGCGGAGCTGGTGTCAGCCGCCGTCACCATCGCGGATGCCGAGGGGCTCGAAGCGG TCAGCACGCGCCGCGTCGCGGAGGCAGTGGGCATCTCCCCCATGTCGTTCTACACGCACATCCCCGGCAAGGCCGAGCTG TTGGACTTGATGATGGATGTCGTGTCCGGCGAAATCCTGAAGGACCGGCCCGTCTTCAAGCCCGCCGACTGGCGCGCCAA CCTGACGCGGGTGGCGACGGACTATCGCGACTTCTACCTGGCCCACCCGTGGGTGATTCCACTCGCGACCCACCGCACTG TGCTGGGCCCGAACACCTTCCGTTCCGCAGACATCGCGTTGAGCGCCATTGAAGGCCTGGGGCTCACGGACCTCGAGATG GACCGGATCATCACCCTGGTCCTCGACTACGTCCACGGCGCGGTCCGCAACGCGGCCCGGGAAAAGATGGTCAAGGACCT GACCGGCATGACGGACGAGGAGTGGTGGTACCGCGTCGCCCCCTTCCTCGAAACCATCGACTTCACGCCCTACCCCGTCC TGTCCCGCGTCGGGAAGACCGCGGGAGAGACCTACGGGGCACACGACCCCAGGGGGGCGTTTGCCTTCGGTCTCGAGCGA GTGCTCGATGGACTGGCGGTACTCATTGACGGAAAGGCACCGGGAAAGAAGCGGCGCTGA
Upstream 100 bases:
>100_bases AAATCGCTCGACATCTTTTCAGCTACGCCGTAACTTCGTACGGCGCACGAGGTTTAGCACAACAACCCCGTACACTGTAA ATAGTTATCCTGAGGTACGG
Downstream 100 bases:
>100_bases GCCGCCAGGCAGTAAGCGTCAAGGTTGTTGTGGCTGGGTGGCCTACGACGGGGGGACCATCTGCCTTCTCCGCCCTGCGC TCTTCAGACGCGAGGCGGCG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; Tetracyclin Repressor Domain-Containing Protein; Regulatory Protein; Transcriptional Regulator TetR Family Protein; Regulator; Tetr Family Transcriptional Regulator; Transcriptional Regulatory Protein; TetR-Family Regulatory Protein; TetR Family Receptor Protein; Transcriptional Regulator GntR Family; Transcriptional Regulator Protein TetR Family; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; TetR Family Transcriptional Represor; TetR Family Regulator; Tetracyclin Repressor; TetR Family Regulatory Protein; TetR Family Transcriptional Repressor; Regulator Protein; Tetracyclin Repressor Domain Protein
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSDEISGRGDPLKSLQLLWGRTEAPKRGPKAKASVAELVSAAVTIADAEGLEAVSTRRVAEAVGISPMSFYTHIPGKAEL LDLMMDVVSGEILKDRPVFKPADWRANLTRVATDYRDFYLAHPWVIPLATHRTVLGPNTFRSADIALSAIEGLGLTDLEM DRIITLVLDYVHGAVRNAAREKMVKDLTGMTDEEWWYRVAPFLETIDFTPYPVLSRVGKTAGETYGAHDPRGAFAFGLER VLDGLAVLIDGKAPGKKRR
Sequences:
>Translated_259_residues MSDEISGRGDPLKSLQLLWGRTEAPKRGPKAKASVAELVSAAVTIADAEGLEAVSTRRVAEAVGISPMSFYTHIPGKAEL LDLMMDVVSGEILKDRPVFKPADWRANLTRVATDYRDFYLAHPWVIPLATHRTVLGPNTFRSADIALSAIEGLGLTDLEM DRIITLVLDYVHGAVRNAAREKMVKDLTGMTDEEWWYRVAPFLETIDFTPYPVLSRVGKTAGETYGAHDPRGAFAFGLER VLDGLAVLIDGKAPGKKRR >Mature_258_residues SDEISGRGDPLKSLQLLWGRTEAPKRGPKAKASVAELVSAAVTIADAEGLEAVSTRRVAEAVGISPMSFYTHIPGKAELL DLMMDVVSGEILKDRPVFKPADWRANLTRVATDYRDFYLAHPWVIPLATHRTVLGPNTFRSADIALSAIEGLGLTDLEMD RIITLVLDYVHGAVRNAAREKMVKDLTGMTDEEWWYRVAPFLETIDFTPYPVLSRVGKTAGETYGAHDPRGAFAFGLERV LDGLAVLIDGKAPGKKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28432; Mature: 28301
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEISGRGDPLKSLQLLWGRTEAPKRGPKAKASVAELVSAAVTIADAEGLEAVSTRRVA CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EAVGISPMSFYTHIPGKAELLDLMMDVVSGEILKDRPVFKPADWRANLTRVATDYRDFYL HHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHE AHPWVIPLATHRTVLGPNTFRSADIALSAIEGLGLTDLEMDRIITLVLDYVHGAVRNAAR ECCEEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EKMVKDLTGMTDEEWWYRVAPFLETIDFTPYPVLSRVGKTAGETYGAHDPRGAFAFGLER HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH VLDGLAVLIDGKAPGKKRR HHHHHEEEECCCCCCCCCC >Mature Secondary Structure SDEISGRGDPLKSLQLLWGRTEAPKRGPKAKASVAELVSAAVTIADAEGLEAVSTRRVA CCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EAVGISPMSFYTHIPGKAELLDLMMDVVSGEILKDRPVFKPADWRANLTRVATDYRDFYL HHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHE AHPWVIPLATHRTVLGPNTFRSADIALSAIEGLGLTDLEMDRIITLVLDYVHGAVRNAAR ECCEEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EKMVKDLTGMTDEEWWYRVAPFLETIDFTPYPVLSRVGKTAGETYGAHDPRGAFAFGLER HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH VLDGLAVLIDGKAPGKKRR HHHHHEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA