The gene/protein map for NC_008095 is currently unavailable.
Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108760465

Identifier: 108760465

GI number: 108760465

Start: 3227577

End: 3228839

Strand: Direct

Name: 108760465

Synonym: MXAN_2775

Alternate gene names: NA

Gene position: 3227577-3228839 (Clockwise)

Preceding gene: 108758586

Following gene: 108759589

Centisome position: 35.31

GC content: 69.99

Gene sequence:

>1263_bases
ATGGCCTCGGTCAAAGGAATTGCGAACGGGGGGAACACGCGCAAGCGCGTCCAGCAAGAGACGCTCCCCCAGGATGTACA
GGCGCAGGAATTGGAACGCTTCCACGCGCAGCGCGAGGCGCTCATCGCCAACGTTGCGCAGTCCGGAGCGAGGCTCCTCA
CGGTCGCGGCCCGGCGGTTGCCGACCGTGCTGACGCGGCCCGTGCTCGAGGGGGGAAGCCGCATTCTCCAGGACACCACC
CTCTACCTCCAGGAAGCGTCGATGGAGGAGTGGCTCCGCGCCGCGCAAAAAAAGCTGAAGGCGAGGCCCGGGAGCTCCAT
CCTTGGGCTGCTGGGCATTGGACTGCTCGCTGGGCGGCTGCTCCGTAAGGTGGCGGAGAAGGGGGGAGCCGAGTCCTTCC
AAGACCGATTGCGCGAAAGCATGTTCCTGGCGACCCATGGTGGAGTGGGGCGGCCCCCAGCCGCCGCACGTCAGCGATTG
CTCAGGGGTGGCGCGGGTGGAGCGCCGACGCAAGGAGGCGTGGCCGAGGGCTTCAAGGAGCGATTGCGCGAAGGCATGTC
CATGGCGACTCTTGGTGGTGGAGTGGGGCGGCCCCCGGCCGCGATGCGCCTGCGCCTGCAGAAGGCTGGAGGGTCGAAGC
AGGGGGCGCCACGCAAGCGCGACGTGAAGGAGCGAGCGCCGCGCGAGCCCGCGGTGAGGGCGAAGGAAGTGGCGCGAGAC
GTCGCCGAGGGCGCCCGGGACGCAACACGCGCCTTCGACGAGGTCACCAAGAGCGCCCAGGGTGCAACACGCGCGTTCGC
AGAGGCGACCCGGGGCGCAGCGCGCAAGGGCGGTGAGGCTGCGAGCGGCGCGCGAAAGGCGATGAAGGACACAACGCGCG
AGGTCGCTCGAGGGGCCGCGAAGCCAGGGGGAAAGAAGTCGCCGGCCAGCACCGAGGCCACGTCCACGAATGCGCCCTCA
CAAGCGCCGAGCGGCTACCTCGGGATGGGGGCCTTCCCCGTCCGGCTGCCGGAGAAGCTCGCGAAGACCCATGGCACCCA
GAGCGGCCTCAAGGTCGCGAGCGTGGAGCCGGATGGCCCGGCCGAGGAGGCGGGGCTGCATCCGGGTGACACGCTGCTCA
CGCTCGAGGGGCAGCCATTGCGAGAGGTGGATGACCTGGTCGCGCAGCTGCCTCCGGAACGTGTGGGCCAGACCGTGCAC
GCAAAGGTGCTGCGCGCCGGGGCTGCCAAGGTCATCGACCTCACCGTTGGCGCGCACCCCTGA

Upstream 100 bases:

>100_bases
CCGCCTCACCTCCCTGAACTTCGCCGCCTGTCGTGTCTACGTTCTGCATGGACAACGCATGCGCGTCCGGCACGCGTGTG
CGTCAGCGGTGTGAGTACCC

Downstream 100 bases:

>100_bases
GCCGGGGGGCGCGAGCGCTCATGCGGCTCACGATGACTTGACGGGGCCGGAGGAGGACCTGCGGCGCGAGGAGGATGTGC
GGGGCCTGGGCGCTCCCTGC

Product: PDZ domain-containing protein

Products: NA

Alternate protein names: PDZ/DHR/GLGF Domain-Containing Protein; S1C Family Peptidase; PDZ Domain-Containing Protein

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MASVKGIANGGNTRKRVQQETLPQDVQAQELERFHAQREALIANVAQSGARLLTVAARRLPTVLTRPVLEGGSRILQDTT
LYLQEASMEEWLRAAQKKLKARPGSSILGLLGIGLLAGRLLRKVAEKGGAESFQDRLRESMFLATHGGVGRPPAAARQRL
LRGGAGGAPTQGGVAEGFKERLREGMSMATLGGGVGRPPAAMRLRLQKAGGSKQGAPRKRDVKERAPREPAVRAKEVARD
VAEGARDATRAFDEVTKSAQGATRAFAEATRGAARKGGEAASGARKAMKDTTREVARGAAKPGGKKSPASTEATSTNAPS
QAPSGYLGMGAFPVRLPEKLAKTHGTQSGLKVASVEPDGPAEEAGLHPGDTLLTLEGQPLREVDDLVAQLPPERVGQTVH
AKVLRAGAAKVIDLTVGAHP

Sequences:

>Translated_420_residues
MASVKGIANGGNTRKRVQQETLPQDVQAQELERFHAQREALIANVAQSGARLLTVAARRLPTVLTRPVLEGGSRILQDTT
LYLQEASMEEWLRAAQKKLKARPGSSILGLLGIGLLAGRLLRKVAEKGGAESFQDRLRESMFLATHGGVGRPPAAARQRL
LRGGAGGAPTQGGVAEGFKERLREGMSMATLGGGVGRPPAAMRLRLQKAGGSKQGAPRKRDVKERAPREPAVRAKEVARD
VAEGARDATRAFDEVTKSAQGATRAFAEATRGAARKGGEAASGARKAMKDTTREVARGAAKPGGKKSPASTEATSTNAPS
QAPSGYLGMGAFPVRLPEKLAKTHGTQSGLKVASVEPDGPAEEAGLHPGDTLLTLEGQPLREVDDLVAQLPPERVGQTVH
AKVLRAGAAKVIDLTVGAHP
>Mature_419_residues
ASVKGIANGGNTRKRVQQETLPQDVQAQELERFHAQREALIANVAQSGARLLTVAARRLPTVLTRPVLEGGSRILQDTTL
YLQEASMEEWLRAAQKKLKARPGSSILGLLGIGLLAGRLLRKVAEKGGAESFQDRLRESMFLATHGGVGRPPAAARQRLL
RGGAGGAPTQGGVAEGFKERLREGMSMATLGGGVGRPPAAMRLRLQKAGGSKQGAPRKRDVKERAPREPAVRAKEVARDV
AEGARDATRAFDEVTKSAQGATRAFAEATRGAARKGGEAASGARKAMKDTTREVARGAAKPGGKKSPASTEATSTNAPSQ
APSGYLGMGAFPVRLPEKLAKTHGTQSGLKVASVEPDGPAEEAGLHPGDTLLTLEGQPLREVDDLVAQLPPERVGQTVHA
KVLRAGAAKVIDLTVGAHP

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43978; Mature: 43847

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVKGIANGGNTRKRVQQETLPQDVQAQELERFHAQREALIANVAQSGARLLTVAARRL
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
PTVLTRPVLEGGSRILQDTTLYLQEASMEEWLRAAQKKLKARPGSSILGLLGIGLLAGRL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LRKVAEKGGAESFQDRLRESMFLATHGGVGRPPAAARQRLLRGGAGGAPTQGGVAEGFKE
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH
RLREGMSMATLGGGVGRPPAAMRLRLQKAGGSKQGAPRKRDVKERAPREPAVRAKEVARD
HHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHH
VAEGARDATRAFDEVTKSAQGATRAFAEATRGAARKGGEAASGARKAMKDTTREVARGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
KPGGKKSPASTEATSTNAPSQAPSGYLGMGAFPVRLPEKLAKTHGTQSGLKVASVEPDGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCC
AEEAGLHPGDTLLTLEGQPLREVDDLVAQLPPERVGQTVHAKVLRAGAAKVIDLTVGAHP
HHHCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHEEEEECCCCC
>Mature Secondary Structure 
ASVKGIANGGNTRKRVQQETLPQDVQAQELERFHAQREALIANVAQSGARLLTVAARRL
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
PTVLTRPVLEGGSRILQDTTLYLQEASMEEWLRAAQKKLKARPGSSILGLLGIGLLAGRL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LRKVAEKGGAESFQDRLRESMFLATHGGVGRPPAAARQRLLRGGAGGAPTQGGVAEGFKE
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH
RLREGMSMATLGGGVGRPPAAMRLRLQKAGGSKQGAPRKRDVKERAPREPAVRAKEVARD
HHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHH
VAEGARDATRAFDEVTKSAQGATRAFAEATRGAARKGGEAASGARKAMKDTTREVARGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
KPGGKKSPASTEATSTNAPSQAPSGYLGMGAFPVRLPEKLAKTHGTQSGLKVASVEPDGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCC
AEEAGLHPGDTLLTLEGQPLREVDDLVAQLPPERVGQTVHAKVLRAGAAKVIDLTVGAHP
HHHCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA