Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is 108760446

Identifier: 108760446

GI number: 108760446

Start: 1927193

End: 1928614

Strand: Direct

Name: 108760446

Synonym: MXAN_1624

Alternate gene names: NA

Gene position: 1927193-1928614 (Clockwise)

Preceding gene: 108761944

Following gene: 108757427

Centisome position: 21.09

GC content: 68.28

Gene sequence:

>1422_bases
ATGACCACGCACTCAATTCGCACCCGCCTTGTCGCGCCCGCGCTGATGGTGCTCGGGATGCTGTCCACGCCTGCCTTCGC
GGCCGCTCCCGCCTCGGCGCCCACCAAGGAAGCGCCTCCGGCCGCCGCCGCGCCCAAGCCCTTCAAAGTCCCCGTCCGCA
CGGAGTTCACGCTCGACAACGGGCTGGAAGTCTCGCTGCTGCCCTACGGCGACATGCCGAAGGTCGCCATCCAACTGGCC
ATCGACACCGGCAACATCCACGAGAAGGCCACGGAGACGTGGCTGGCGGACCTGACGGGAAAGCTGCTGTCGGAGGGCAC
CACCACCCGTTCCGCGGAGCAGCTTGCCCAGGCGGCCGCGCAGCTGGGTGGTTCGCTCAACATCGGCACGACGATGGACC
AGACCTATGTCGGTCTGGAGGTCCTCTCCGAGTCGGCGCCGGACGCCGTGGCCCTCATCGCGGACGTCATCCAGAACCCG
GCCTTCCCGCCGGCGGAGGTCGAGCGCGTCAAGGGCGACCTCGTGCGGGAGATGGCCATCTACAAGAGCCGGCCGGGTAC
GCTCGCCGACGAGCGGCTGCTCCAGTCGCTCTACGGTGACCACCCGTATGGCCGCTACTTCCCGCCGGAGGCCCAGCTCA
AGGGCTACACGCCGGAGGCCGTCCGCGCGCACTACGACGCCAACATCGGCGCGGCCCGGGCGCGGCTGTACGTCGTCGGC
CGGTTCGAGCCGGCGCCGGTGGAAAAGGCCATCCGGGACGCGTTCACCGGCTGGAAGGCCGGCGCGGCGCGCCTCCGGAA
CGTGCCCAAGCAGAAGGTGGCGAAGGCGGTCCAGTTCATCGACCGCCCCGGCTCGGTGCAGTCCACGGTGCGCGTGGCGG
TGAAGGGCCTGCCGCCCTCCAGCCCGGACTACGTCAAGCAGACGGTGATGAACACGCTGCTCGGTGGCTACTTCAGCTCG
CGCATCACCGCGAACATCCGCGAGGCGAAGGGCTACACGTATTCGCCCTACAGCGATGTGTCCACGCACCTGGAGGACGC
CTACTGGGTGCAGAACGCGGACGTGACGACGGCCGTCACGGGCGAGTCGCTGAAGGAGATCCTCAAGGAGGTGGCCACCC
TGCGCAAGACGCCGCCGCCCGCGGACGAGCTGAGCGCTGTCCAGAGCTATCTGGCGGGCTCCTTCCTGCTCCAGAACTCG
TCGCGCAGCGGCATCATCTACCAGCTCCGCTTCGTGGACCTGCACGGCCTGCCTGATTCGTATCTGCAGAACTACGTGCA
GTCGGTGATGGCCGTCACGCCGGAGCAGGTGCAGCAGCTGGCCGCGAAGATGCTGACGCGTGAGGCGATGACCTTCATCG
TCGTGGGCGACCAGAAGTTGGTGGCGCCGCAGCTGAAGGTCGTATCCCCCGCGCTGAAGTGA

Upstream 100 bases:

>100_bases
GGCGAAGGAGTATCTGCGCCGTGAGAACCGCACCGTGTTGACGGTGACGCCCGCCACGGCGCCCGCCACCAAGACGCAGG
CCCCCTGAGGACACGCACCC

Downstream 100 bases:

>100_bases
GTCCTGGGAGGGCGGAGGCCACACCTGGGCCTCCGCCTTCCTCCCACGGTGTCCCTACTCGGGGCGGGCTGTGACGCCGT
CCGGGTAGAGCGACTCGGGG

Product: M16 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MTTHSIRTRLVAPALMVLGMLSTPAFAAAPASAPTKEAPPAAAAPKPFKVPVRTEFTLDNGLEVSLLPYGDMPKVAIQLA
IDTGNIHEKATETWLADLTGKLLSEGTTTRSAEQLAQAAAQLGGSLNIGTTMDQTYVGLEVLSESAPDAVALIADVIQNP
AFPPAEVERVKGDLVREMAIYKSRPGTLADERLLQSLYGDHPYGRYFPPEAQLKGYTPEAVRAHYDANIGAARARLYVVG
RFEPAPVEKAIRDAFTGWKAGAARLRNVPKQKVAKAVQFIDRPGSVQSTVRVAVKGLPPSSPDYVKQTVMNTLLGGYFSS
RITANIREAKGYTYSPYSDVSTHLEDAYWVQNADVTTAVTGESLKEILKEVATLRKTPPPADELSAVQSYLAGSFLLQNS
SRSGIIYQLRFVDLHGLPDSYLQNYVQSVMAVTPEQVQQLAAKMLTREAMTFIVVGDQKLVAPQLKVVSPALK

Sequences:

>Translated_473_residues
MTTHSIRTRLVAPALMVLGMLSTPAFAAAPASAPTKEAPPAAAAPKPFKVPVRTEFTLDNGLEVSLLPYGDMPKVAIQLA
IDTGNIHEKATETWLADLTGKLLSEGTTTRSAEQLAQAAAQLGGSLNIGTTMDQTYVGLEVLSESAPDAVALIADVIQNP
AFPPAEVERVKGDLVREMAIYKSRPGTLADERLLQSLYGDHPYGRYFPPEAQLKGYTPEAVRAHYDANIGAARARLYVVG
RFEPAPVEKAIRDAFTGWKAGAARLRNVPKQKVAKAVQFIDRPGSVQSTVRVAVKGLPPSSPDYVKQTVMNTLLGGYFSS
RITANIREAKGYTYSPYSDVSTHLEDAYWVQNADVTTAVTGESLKEILKEVATLRKTPPPADELSAVQSYLAGSFLLQNS
SRSGIIYQLRFVDLHGLPDSYLQNYVQSVMAVTPEQVQQLAAKMLTREAMTFIVVGDQKLVAPQLKVVSPALK
>Mature_472_residues
TTHSIRTRLVAPALMVLGMLSTPAFAAAPASAPTKEAPPAAAAPKPFKVPVRTEFTLDNGLEVSLLPYGDMPKVAIQLAI
DTGNIHEKATETWLADLTGKLLSEGTTTRSAEQLAQAAAQLGGSLNIGTTMDQTYVGLEVLSESAPDAVALIADVIQNPA
FPPAEVERVKGDLVREMAIYKSRPGTLADERLLQSLYGDHPYGRYFPPEAQLKGYTPEAVRAHYDANIGAARARLYVVGR
FEPAPVEKAIRDAFTGWKAGAARLRNVPKQKVAKAVQFIDRPGSVQSTVRVAVKGLPPSSPDYVKQTVMNTLLGGYFSSR
ITANIREAKGYTYSPYSDVSTHLEDAYWVQNADVTTAVTGESLKEILKEVATLRKTPPPADELSAVQSYLAGSFLLQNSS
RSGIIYQLRFVDLHGLPDSYLQNYVQSVMAVTPEQVQQLAAKMLTREAMTFIVVGDQKLVAPQLKVVSPALK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Drosophila melanogaster, GI21357875, Length=275, Percent_Identity=25.0909090909091, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24646943, Length=275, Percent_Identity=25.0909090909091, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 51095; Mature: 50964

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHSIRTRLVAPALMVLGMLSTPAFAAAPASAPTKEAPPAAAAPKPFKVPVRTEFTLDN
CCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
GLEVSLLPYGDMPKVAIQLAIDTGNIHEKATETWLADLTGKLLSEGTTTRSAEQLAQAAA
CCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QLGGSLNIGTTMDQTYVGLEVLSESAPDAVALIADVIQNPAFPPAEVERVKGDLVREMAI
HCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
YKSRPGTLADERLLQSLYGDHPYGRYFPPEAQLKGYTPEAVRAHYDANIGAARARLYVVG
HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEE
RFEPAPVEKAIRDAFTGWKAGAARLRNVPKQKVAKAVQFIDRPGSVQSTVRVAVKGLPPS
CCCCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHEECCCCC
SPDYVKQTVMNTLLGGYFSSRITANIREAKGYTYSPYSDVSTHLEDAYWVQNADVTTAVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEC
GESLKEILKEVATLRKTPPPADELSAVQSYLAGSFLLQNSSRSGIIYQLRFVDLHGLPDS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEEECCCCHH
YLQNYVQSVMAVTPEQVQQLAAKMLTREAMTFIVVGDQKLVAPQLKVVSPALK
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEECCCHHCCCHHHHHCCCCC
>Mature Secondary Structure 
TTHSIRTRLVAPALMVLGMLSTPAFAAAPASAPTKEAPPAAAAPKPFKVPVRTEFTLDN
CCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
GLEVSLLPYGDMPKVAIQLAIDTGNIHEKATETWLADLTGKLLSEGTTTRSAEQLAQAAA
CCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QLGGSLNIGTTMDQTYVGLEVLSESAPDAVALIADVIQNPAFPPAEVERVKGDLVREMAI
HCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
YKSRPGTLADERLLQSLYGDHPYGRYFPPEAQLKGYTPEAVRAHYDANIGAARARLYVVG
HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEE
RFEPAPVEKAIRDAFTGWKAGAARLRNVPKQKVAKAVQFIDRPGSVQSTVRVAVKGLPPS
CCCCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHEECCCCC
SPDYVKQTVMNTLLGGYFSSRITANIREAKGYTYSPYSDVSTHLEDAYWVQNADVTTAVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEC
GESLKEILKEVATLRKTPPPADELSAVQSYLAGSFLLQNSSRSGIIYQLRFVDLHGLPDS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEEECCCCHH
YLQNYVQSVMAVTPEQVQQLAAKMLTREAMTFIVVGDQKLVAPQLKVVSPALK
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEECCCHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]