Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is adhB [H]

Identifier: 108760445

GI number: 108760445

Start: 1911615

End: 1912589

Strand: Direct

Name: adhB [H]

Synonym: MXAN_1611

Alternate gene names: 108760445

Gene position: 1911615-1912589 (Clockwise)

Preceding gene: 108761575

Following gene: 108757270

Centisome position: 20.92

GC content: 72.31

Gene sequence:

>975_bases
ATGCGCTCCCATCTCCTGTTCCTGCTGCTGGCGCTGAGCGCCTGTCAGCGCAACGAATCGCCGCCGCCACCCGCGAAGGC
TCCGGCCGCATCCGCGCCGTCGCCTCGTGCTCCCGCCGTCCCGGCCGTCACCGCGTCCGCGGACGCGGCGAAGCTGGAGC
GGGGCCGGTACCTCGTGGAGAACGTGCTCGCCTGTGGCTCCTGCCACACGCCGCGCGACTGGGCTCGGTATGGAGGCCCC
GCCTCCGGGCCCGCGCTCTCCGGCGCCTGCTGGGATGACGCGGCCTGGGAGCTGCCCGGTCGCGTCTGCGCGCCCAACAT
CACCTCCGATCCCGAGCACGGCATCGGCCGCTGGACGGATGAGGAGCTGATGCGCGCGCTGCGCGACGGCACCGGGCGCG
ATGGGAAGACGCTCTTCCCACTCATGCCGTTCCTCCTCTACCGCGAGCTGTCGGACGCGGACGCCCATGCCGTGATTGCC
TGGCTGCGTCAGGCCCCGGCCACCCCGCGCGCTTCGGCCCGCTCGGTCATCCCGGACGAGGTGTACGCGCAGTACAAGGA
CATGGCCGCGCCCATGAAGACGGCCGTGCCGGAGCCCGCCGCAGATGACGTCTCTCGCGGTCGCTACCTGGCCACCATGG
CGCAGTGCGCCGCGTGTCACGCGGGCATGGACGAGGCGGGCACGCCCTTCGTGGGAGGACGTCCGCTGCCCACGCCGCAC
GGCCCGGAAGTCGTATCCAATCTCACGCCGCATGCACACGGACTGGGCGCCGTGGACGAAGCAGCCTTCGTCGCCCGCTT
CACCGCCTTCAAGGACCTGGCACCCGCGCCCGCGCGGGCGGGCCAGGTGAACAAGCTCACCATGCCCTGGGGTTTCTTCG
CCGGACTGGCGGAGGCGGACCTCAAGGCCCTCTACCGTTACCTGCGCACGGTGCCCGCCGTGGCCCCCGCCGCGCCGTCC
GCGTCTGGCAAATGA

Upstream 100 bases:

>100_bases
CCGCGGACCGCCTGCCCATCGAATACCGCCGGGGTGTCATCGCCCTGCGGCTGGGCAAGCCCGTGGACGGACCCGCCCCG
GAATGAGGACCCACACCCCC

Downstream 100 bases:

>100_bases
CCCATTCTGGCGCCACCTGGGAGCGTCCGGTAGACTCCCAGCGCGTCCCCTGAAAGCCCATCGTTGCGCGCCCTTCCCCC
AGGGGCGCGCGTGACGCGTG

Product: cytochrome c family protein

Products: NA

Alternate protein names: Cytochrome c-553; Cytochrome c553; G3-ADH subunit II [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MRSHLLFLLLALSACQRNESPPPPAKAPAASAPSPRAPAVPAVTASADAAKLERGRYLVENVLACGSCHTPRDWARYGGP
ASGPALSGACWDDAAWELPGRVCAPNITSDPEHGIGRWTDEELMRALRDGTGRDGKTLFPLMPFLLYRELSDADAHAVIA
WLRQAPATPRASARSVIPDEVYAQYKDMAAPMKTAVPEPAADDVSRGRYLATMAQCAACHAGMDEAGTPFVGGRPLPTPH
GPEVVSNLTPHAHGLGAVDEAAFVARFTAFKDLAPAPARAGQVNKLTMPWGFFAGLAEADLKALYRYLRTVPAVAPAAPS
ASGK

Sequences:

>Translated_324_residues
MRSHLLFLLLALSACQRNESPPPPAKAPAASAPSPRAPAVPAVTASADAAKLERGRYLVENVLACGSCHTPRDWARYGGP
ASGPALSGACWDDAAWELPGRVCAPNITSDPEHGIGRWTDEELMRALRDGTGRDGKTLFPLMPFLLYRELSDADAHAVIA
WLRQAPATPRASARSVIPDEVYAQYKDMAAPMKTAVPEPAADDVSRGRYLATMAQCAACHAGMDEAGTPFVGGRPLPTPH
GPEVVSNLTPHAHGLGAVDEAAFVARFTAFKDLAPAPARAGQVNKLTMPWGFFAGLAEADLKALYRYLRTVPAVAPAAPS
ASGK
>Mature_324_residues
MRSHLLFLLLALSACQRNESPPPPAKAPAASAPSPRAPAVPAVTASADAAKLERGRYLVENVLACGSCHTPRDWARYGGP
ASGPALSGACWDDAAWELPGRVCAPNITSDPEHGIGRWTDEELMRALRDGTGRDGKTLFPLMPFLLYRELSDADAHAVIA
WLRQAPATPRASARSVIPDEVYAQYKDMAAPMKTAVPEPAADDVSRGRYLATMAQCAACHAGMDEAGTPFVGGRPLPTPH
GPEVVSNLTPHAHGLGAVDEAAFVARFTAFKDLAPAPARAGQVNKLTMPWGFFAGLAEADLKALYRYLRTVPAVAPAAPS
ASGK

Specific function: Dehydration of primary alcohols (exception:methanol) [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 34161; Mature: 34161

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSHLLFLLLALSACQRNESPPPPAKAPAASAPSPRAPAVPAVTASADAAKLERGRYLVE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHH
NVLACGSCHTPRDWARYGGPASGPALSGACWDDAAWELPGRVCAPNITSDPEHGIGRWTD
HHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCCCH
EELMRALRDGTGRDGKTLFPLMPFLLYRELSDADAHAVIAWLRQAPATPRASARSVIPDE
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHCCCHHH
VYAQYKDMAAPMKTAVPEPAADDVSRGRYLATMAQCAACHAGMDEAGTPFVGGRPLPTPH
HHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GPEVVSNLTPHAHGLGAVDEAAFVARFTAFKDLAPAPARAGQVNKLTMPWGFFAGLAEAD
CHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHH
LKALYRYLRTVPAVAPAAPSASGK
HHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRSHLLFLLLALSACQRNESPPPPAKAPAASAPSPRAPAVPAVTASADAAKLERGRYLVE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHH
NVLACGSCHTPRDWARYGGPASGPALSGACWDDAAWELPGRVCAPNITSDPEHGIGRWTD
HHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCCCH
EELMRALRDGTGRDGKTLFPLMPFLLYRELSDADAHAVIAWLRQAPATPRASARSVIPDE
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHCCCHHH
VYAQYKDMAAPMKTAVPEPAADDVSRGRYLATMAQCAACHAGMDEAGTPFVGGRPLPTPH
HHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GPEVVSNLTPHAHGLGAVDEAAFVARFTAFKDLAPAPARAGQVNKLTMPWGFFAGLAEAD
CHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHH
LKALYRYLRTVPAVAPAAPSASGK
HHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9055427 [H]