| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760410
Identifier: 108760410
GI number: 108760410
Start: 196477
End: 197580
Strand: Direct
Name: 108760410
Synonym: MXAN_0162
Alternate gene names: NA
Gene position: 196477-197580 (Clockwise)
Preceding gene: 108760719
Following gene: 108759502
Centisome position: 2.15
GC content: 69.11
Gene sequence:
>1104_bases ATGCTCGCTTCTCCACTGCCATCCCTGGTGTCCTCCCTGTTGTTGTCCCAGGCCCCTTCGCCGGAGCCGTCTCCCGATGC CGAAGCCCCGGGCCTGCTGTCTCGCCTGGAGGTGGAAGGCGGGGTGGACGTCTACTTCGGCTACAACACCAATCGCCCCG CCGACGGTGCCAGTTTCATCCCTGGCACGGGCACCACCGCCCGGCGGGACAACGAGGTCTCCATCAACCTCGCGTCGCTG GGCGTGTCGCTCGCGCCCGAGCCCGTGGGCTTCAAGGTGTTGCTGGGCTTCGGCACCGGCATCGAGGTGCTGCACCAGGC CGAGCCGGAAGGCCCGGCCATCGGGCCCGAGGTGTGGCGCCATCTCCAGCAGGCCACGGTGTCGTACGCGACGGGACCGC TCACGTTGGAGGCGGGCGTCTATCCCAGTCACATCGGTCTGGAGTCGTTCCAGTCGCGGCTCAACTGGAACTACACGCGC TCGTGGATGGGTGAGCTGTCGCCCTACTACCAGTCCGGCCTCAAGAGCACCTGGGCCTTCGATGACGCGTGGAGCGCGCA GCTCCACCTGCTCAATGGCTGGCAGACGATTGGAGAGAACAACCGCGGCAAGGCGCTGGGCACGCAGGTGGCCTACGCGG GCCCGCGGCTATCCACCGCCCTCAACACCTTCGTGGGAGAAGAAGGTGACGGTGGCCTGCGACTCTTCGTGGACGCCGTG GCCACCTGGAAGGTGACGCACGCCTTCGCGCTGGCCGCCACGGCGGACGTGGGCCGGCAGGCGCGTTCCGGACAGTCGGC GGCCCTGTGGTACGCGGCGGGCTTCAACGCGCGGGTGCAACTCTCCGACGTCGTGGCCGTTGCCGCCCGGGTGGAGGCCT ATCGCGACGAGGACGGGCTCATCACGGGGGCCGTCCAGACGTTGGCGGGCGGCACCCTCACCCTGGAGTTGAAGCCCGCA GAACACCTGGTCCTCAAGATGGAGGCGCGCCGCGACACCTCCACCGCAGACGTGTTCACCGGCCGCGCCACGGGAGGGGA TGGCGCGCCCATGCTCGAGGACGCCGAGACGCTCGGGGTGCTCAGCGCCGTCGCCTGGTTCTGA
Upstream 100 bases:
>100_bases TGCAACCTGGAGAATGGCGGCAGGGACACAAGCCCCTGGAATGACAGGGGGTTCGTGAGCCGTGGCCGGGCACGGCGCGT GCTCTTGGGGAGACACGACC
Downstream 100 bases:
>100_bases ACAGGAGCCCCATCTCATGGACCTCGTGCTCGTTCTTGTCACCGCCGCTTTCTTCGCGCTCGCGTGGGTCTACGTCCACG GATGCGAGCGCCTGTGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MLASPLPSLVSSLLLSQAPSPEPSPDAEAPGLLSRLEVEGGVDVYFGYNTNRPADGASFIPGTGTTARRDNEVSINLASL GVSLAPEPVGFKVLLGFGTGIEVLHQAEPEGPAIGPEVWRHLQQATVSYATGPLTLEAGVYPSHIGLESFQSRLNWNYTR SWMGELSPYYQSGLKSTWAFDDAWSAQLHLLNGWQTIGENNRGKALGTQVAYAGPRLSTALNTFVGEEGDGGLRLFVDAV ATWKVTHAFALAATADVGRQARSGQSAALWYAAGFNARVQLSDVVAVAARVEAYRDEDGLITGAVQTLAGGTLTLELKPA EHLVLKMEARRDTSTADVFTGRATGGDGAPMLEDAETLGVLSAVAWF
Sequences:
>Translated_367_residues MLASPLPSLVSSLLLSQAPSPEPSPDAEAPGLLSRLEVEGGVDVYFGYNTNRPADGASFIPGTGTTARRDNEVSINLASL GVSLAPEPVGFKVLLGFGTGIEVLHQAEPEGPAIGPEVWRHLQQATVSYATGPLTLEAGVYPSHIGLESFQSRLNWNYTR SWMGELSPYYQSGLKSTWAFDDAWSAQLHLLNGWQTIGENNRGKALGTQVAYAGPRLSTALNTFVGEEGDGGLRLFVDAV ATWKVTHAFALAATADVGRQARSGQSAALWYAAGFNARVQLSDVVAVAARVEAYRDEDGLITGAVQTLAGGTLTLELKPA EHLVLKMEARRDTSTADVFTGRATGGDGAPMLEDAETLGVLSAVAWF >Mature_367_residues MLASPLPSLVSSLLLSQAPSPEPSPDAEAPGLLSRLEVEGGVDVYFGYNTNRPADGASFIPGTGTTARRDNEVSINLASL GVSLAPEPVGFKVLLGFGTGIEVLHQAEPEGPAIGPEVWRHLQQATVSYATGPLTLEAGVYPSHIGLESFQSRLNWNYTR SWMGELSPYYQSGLKSTWAFDDAWSAQLHLLNGWQTIGENNRGKALGTQVAYAGPRLSTALNTFVGEEGDGGLRLFVDAV ATWKVTHAFALAATADVGRQARSGQSAALWYAAGFNARVQLSDVVAVAARVEAYRDEDGLITGAVQTLAGGTLTLELKPA EHLVLKMEARRDTSTADVFTGRATGGDGAPMLEDAETLGVLSAVAWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38802; Mature: 38802
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASPLPSLVSSLLLSQAPSPEPSPDAEAPGLLSRLEVEGGVDVYFGYNTNRPADGASFI CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEECCCEEEEEECCCCCCCCCCCCC PGTGTTARRDNEVSINLASLGVSLAPEPVGFKVLLGFGTGIEVLHQAEPEGPAIGPEVWR CCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCHHHHH HLQQATVSYATGPLTLEAGVYPSHIGLESFQSRLNWNYTRSWMGELSPYYQSGLKSTWAF HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCCCCC DDAWSAQLHLLNGWQTIGENNRGKALGTQVAYAGPRLSTALNTFVGEEGDGGLRLFVDAV CCCCCCEEEEEECHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEEEHH ATWKVTHAFALAATADVGRQARSGQSAALWYAAGFNARVQLSDVVAVAARVEAYRDEDGL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCE ITGAVQTLAGGTLTLELKPAEHLVLKMEARRDTSTADVFTGRATGGDGAPMLEDAETLGV EEHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCCHHEEECCCCCCCCCCCHHHHHHHHH LSAVAWF HHHHHCC >Mature Secondary Structure MLASPLPSLVSSLLLSQAPSPEPSPDAEAPGLLSRLEVEGGVDVYFGYNTNRPADGASFI CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEECCCEEEEEECCCCCCCCCCCCC PGTGTTARRDNEVSINLASLGVSLAPEPVGFKVLLGFGTGIEVLHQAEPEGPAIGPEVWR CCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCHHHHH HLQQATVSYATGPLTLEAGVYPSHIGLESFQSRLNWNYTRSWMGELSPYYQSGLKSTWAF HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCCCCC DDAWSAQLHLLNGWQTIGENNRGKALGTQVAYAGPRLSTALNTFVGEEGDGGLRLFVDAV CCCCCCEEEEEECHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEEEHH ATWKVTHAFALAATADVGRQARSGQSAALWYAAGFNARVQLSDVVAVAARVEAYRDEDGL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCE ITGAVQTLAGGTLTLELKPAEHLVLKMEARRDTSTADVFTGRATGGDGAPMLEDAETLGV EEHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCCHHEEECCCCCCCCCCCHHHHHHHHH LSAVAWF HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA