| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is czcD [H]
Identifier: 108760363
GI number: 108760363
Start: 3931866
End: 3932873
Strand: Direct
Name: czcD [H]
Synonym: MXAN_3382
Alternate gene names: 108760363
Gene position: 3931866-3932873 (Clockwise)
Preceding gene: 108761772
Following gene: 108761572
Centisome position: 43.02
GC content: 66.67
Gene sequence:
>1008_bases GTGACTACTTCCCCTTACACCCGCGGTGAATCCGGGCATGGCCACGAGCATGACCACGGCGACGGACATGGCCATGGCCA TCATCATCATGGCCATGGGCACGGTCATGGGCACGGTCCCCGGAGGGGCGGACTGGCGGAGGAGCGGAAGAAGGACAAGC GCCGGCTCATCTTCGCCCTGGTGCTGACGGCCACCATCGCGCTGGCGGAGGCGGTGGGCGGCTGGCTGACGAACTCGCTG GCCCTGATGTCCGACGCGGGCCACATGCTGACGGACGTGTCCGCGCTGGCGCTGAGCCTGGTGGCGCTGTGGTTCGCGGG CAAGCCGGCGGACGTGAAGAAGACGTACGGCTACTACCGGATGGAGATCCTCAGCGCGCTGCTCAACGGCGTGCTGCTGA TGGGCATCACCGGCTTCATCCTCTATGAGGCCTGGGAGCGGGTGCGCTCGCCGGCGCAAGTGAACATCGGGCCCATGGCC ATCGTGGCGTCGGTGGGCCTCTTGGCCAACCTGGGCGCGCTGGGGTTCCTGCACCGCTCCCACTCCATGAACGTGCGCGG GGCCTTCCTGCACGTGCTGGGGGATACGCTGTCGTCGGTGGGCGTGCTCGTGGGCGCGGGCATCATGGCGTACACGGGCT GGTACGTCGTGGACCCCATCATCTCGGTGGTCATCTCCATCGTCATCGTCATCGGCGCGGTGCGGCTGGTGCGCGACGCG GTGGACGTGCTGATGGAGGCGGTTCCGGCGCACGTGGACCTGGCGCAAATCAAGGAGCTGATGCTGCGCGCGCAGGGCGT CACGGCGGTGCATGACCTGCACGTGTGGACCATCTCCAGCGGCGTGTACGCGCTGTCCGCGCACCTGGTGGTGCAGGACC CCATGGTCTGCAACAACGACGAGATTCTCTCCGCGGTGAAGCACGACCTGTTCGACCGCTTCGGAATCGACCACACCACG ATTCAAATCGAGAGCGAGACCTACTCCCACCTGGGCGAGGTCCACTGA
Upstream 100 bases:
>100_bases TCTCCCCACGCTCCGGAGCAGGGGATGCCGGGCCTGGCGGCAGCCAGATTCCCGGCCTCTCATACCTCATGACTGGGCAT TAGCCGCACCCCTCACTCCC
Downstream 100 bases:
>100_bases CGGCCCTGGGGCCCGGCCGGGGCCCCCCGTCCGCGTGCCCCAGCGGACGCTCCCAGCAGCTTCGCCTTGCCTCGGGCGGC GCGGGCGGATGATTCTCCGC
Product: cation efflux family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTTSPYTRGESGHGHEHDHGDGHGHGHHHHGHGHGHGHGPRRGGLAEERKKDKRRLIFALVLTATIALAEAVGGWLTNSL ALMSDAGHMLTDVSALALSLVALWFAGKPADVKKTYGYYRMEILSALLNGVLLMGITGFILYEAWERVRSPAQVNIGPMA IVASVGLLANLGALGFLHRSHSMNVRGAFLHVLGDTLSSVGVLVGAGIMAYTGWYVVDPIISVVISIVIVIGAVRLVRDA VDVLMEAVPAHVDLAQIKELMLRAQGVTAVHDLHVWTISSGVYALSAHLVVQDPMVCNNDEILSAVKHDLFDRFGIDHTT IQIESETYSHLGEVH
Sequences:
>Translated_335_residues MTTSPYTRGESGHGHEHDHGDGHGHGHHHHGHGHGHGHGPRRGGLAEERKKDKRRLIFALVLTATIALAEAVGGWLTNSL ALMSDAGHMLTDVSALALSLVALWFAGKPADVKKTYGYYRMEILSALLNGVLLMGITGFILYEAWERVRSPAQVNIGPMA IVASVGLLANLGALGFLHRSHSMNVRGAFLHVLGDTLSSVGVLVGAGIMAYTGWYVVDPIISVVISIVIVIGAVRLVRDA VDVLMEAVPAHVDLAQIKELMLRAQGVTAVHDLHVWTISSGVYALSAHLVVQDPMVCNNDEILSAVKHDLFDRFGIDHTT IQIESETYSHLGEVH >Mature_334_residues TTSPYTRGESGHGHEHDHGDGHGHGHHHHGHGHGHGHGPRRGGLAEERKKDKRRLIFALVLTATIALAEAVGGWLTNSLA LMSDAGHMLTDVSALALSLVALWFAGKPADVKKTYGYYRMEILSALLNGVLLMGITGFILYEAWERVRSPAQVNIGPMAI VASVGLLANLGALGFLHRSHSMNVRGAFLHVLGDTLSSVGVLVGAGIMAYTGWYVVDPIISVVISIVIVIGAVRLVRDAV DVLMEAVPAHVDLAQIKELMLRAQGVTAVHDLHVWTISSGVYALSAHLVVQDPMVCNNDEILSAVKHDLFDRFGIDHTTI QIESETYSHLGEVH
Specific function: Involved in divalent cation and potassium homeostasis in the cell. Catalyzes the active efflux of zinc, cadmium and cobalt, in exchange for potassium and H(+) ions [H]
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily [H]
Homologues:
Organism=Homo sapiens, GI21359890, Length=308, Percent_Identity=35.0649350649351, Blast_Score=184, Evalue=9e-47, Organism=Homo sapiens, GI52352805, Length=317, Percent_Identity=33.4384858044164, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI21361112, Length=309, Percent_Identity=33.0097087378641, Blast_Score=162, Evalue=4e-40, Organism=Homo sapiens, GI64762489, Length=311, Percent_Identity=34.4051446945338, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI289803013, Length=312, Percent_Identity=33.974358974359, Blast_Score=148, Evalue=5e-36, Organism=Homo sapiens, GI289803009, Length=312, Percent_Identity=33.974358974359, Blast_Score=148, Evalue=5e-36, Organism=Homo sapiens, GI289803007, Length=312, Percent_Identity=33.974358974359, Blast_Score=148, Evalue=5e-36, Organism=Homo sapiens, GI289803003, Length=312, Percent_Identity=33.974358974359, Blast_Score=148, Evalue=5e-36, Organism=Homo sapiens, GI20070323, Length=378, Percent_Identity=28.8359788359788, Blast_Score=146, Evalue=2e-35, Organism=Homo sapiens, GI14210520, Length=221, Percent_Identity=33.0316742081448, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI222080086, Length=142, Percent_Identity=34.5070422535211, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI40255009, Length=142, Percent_Identity=34.5070422535211, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI52351208, Length=119, Percent_Identity=39.4957983193277, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI52352803, Length=131, Percent_Identity=38.9312977099237, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI1786966, Length=291, Percent_Identity=40.2061855670103, Blast_Score=182, Evalue=3e-47, Organism=Escherichia coli, GI1790349, Length=254, Percent_Identity=24.4094488188976, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17555794, Length=337, Percent_Identity=33.8278931750742, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17555796, Length=339, Percent_Identity=33.0383480825959, Blast_Score=167, Evalue=5e-42, Organism=Caenorhabditis elegans, GI193210990, Length=344, Percent_Identity=30.2325581395349, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI32564488, Length=308, Percent_Identity=29.8701298701299, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17550442, Length=320, Percent_Identity=23.4375, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17550440, Length=320, Percent_Identity=23.4375, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323899, Length=148, Percent_Identity=37.1621621621622, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6320411, Length=179, Percent_Identity=34.0782122905028, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6324892, Length=149, Percent_Identity=30.8724832214765, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24583858, Length=359, Percent_Identity=30.3621169916435, Blast_Score=143, Evalue=1e-34, Organism=Drosophila melanogaster, GI24656728, Length=334, Percent_Identity=30.5389221556886, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24656724, Length=334, Percent_Identity=30.5389221556886, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24656720, Length=334, Percent_Identity=30.5389221556886, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24656715, Length=334, Percent_Identity=30.5389221556886, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI21357035, Length=334, Percent_Identity=30.5389221556886, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24584409, Length=147, Percent_Identity=38.7755102040816, Blast_Score=104, Evalue=9e-23, Organism=Drosophila melanogaster, GI28574430, Length=147, Percent_Identity=38.7755102040816, Blast_Score=104, Evalue=9e-23, Organism=Drosophila melanogaster, GI24645863, Length=149, Percent_Identity=34.8993288590604, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24585900, Length=147, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24585898, Length=147, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24585896, Length=147, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI19921672, Length=147, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 36057; Mature: 35926
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSPYTRGESGHGHEHDHGDGHGHGHHHHGHGHGHGHGPRRGGLAEERKKDKRRLIFAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VLTATIALAEAVGGWLTNSLALMSDAGHMLTDVSALALSLVALWFAGKPADVKKTYGYYR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH MEILSALLNGVLLMGITGFILYEAWERVRSPAQVNIGPMAIVASVGLLANLGALGFLHRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC HSMNVRGAFLHVLGDTLSSVGVLVGAGIMAYTGWYVVDPIISVVISIVIVIGAVRLVRDA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDVLMEAVPAHVDLAQIKELMLRAQGVTAVHDLHVWTISSGVYALSAHLVVQDPMVCNND HHHHHHHHCCCCCHHHHHHHHHHHCCCCEEHHEEEEEECCCCEEHHEEEEEECCCCCCCH EILSAVKHDLFDRFGIDHTTIQIESETYSHLGEVH HHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCC >Mature Secondary Structure TTSPYTRGESGHGHEHDHGDGHGHGHHHHGHGHGHGHGPRRGGLAEERKKDKRRLIFAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VLTATIALAEAVGGWLTNSLALMSDAGHMLTDVSALALSLVALWFAGKPADVKKTYGYYR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH MEILSALLNGVLLMGITGFILYEAWERVRSPAQVNIGPMAIVASVGLLANLGALGFLHRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC HSMNVRGAFLHVLGDTLSSVGVLVGAGIMAYTGWYVVDPIISVVISIVIVIGAVRLVRDA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDVLMEAVPAHVDLAQIKELMLRAQGVTAVHDLHVWTISSGVYALSAHLVVQDPMVCNND HHHHHHHHCCCCCHHHHHHHHHHHCCCCEEHHEEEEEECCCCEEHHEEEEEECCCCCCCH EILSAVKHDLFDRFGIDHTTIQIESETYSHLGEVH HHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9308178; 9384377; 9099864 [H]