| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is gltX
Identifier: 108760344
GI number: 108760344
Start: 3121538
End: 3122977
Strand: Reverse
Name: gltX
Synonym: MXAN_2675
Alternate gene names: 108760344
Gene position: 3122977-3121538 (Counterclockwise)
Preceding gene: 108762484
Following gene: 108760997
Centisome position: 34.17
GC content: 67.78
Gene sequence:
>1440_bases ATGCCTCCTGCCCTTCGCGTCCGCTTCGCTCCCTCGCCTACCGGCTACCTTCACATTGGCGGTGCCCGTACGGCGCTGAT GAACTTTCTCCAGGCGCGGCGCCAGGGCGGCACCTTCGTCCTTCGCATGGAGGACACGGACCAGGGCCGCTCCACCCCGG AGTCGGTGCAGGCCATCCTGGACGGGCTGAACTGGCTGGGCATCGACTGGGATGAGGGCCCCGGTAAGGAAGGCCCCTAC GCCCCCTACTTCCAGATGCAGCGGCTGGACACCTATCGCAAGCACGCCGACCAGCTCATCGCCGAGGGCAAGGCCTACCG GTGCTACTGCACGAAGGAGGACCTCGACGCGCAGCGGCAGGTGGCGGAGAAGGCGGGCGGCGCGTTCAAGTACCCGGGCA CCTGCCGCGAGCGGACCGAGCCCCCCGCCGGCCGCAACGCCGCGGACGCCGTCATCCGCTTCAAGATGCCCGCGGGTGAC GGTTCCGTGTCCTTCACCGACAAGGCGCTGGGCACCATCACCAAGACGCACAGCGACCTGGATGACTGGGTCATGATGCG GGCGGACGGCATCCCCGTGTACAACTTCGGGTGTGTCATTGATGACCACCTGATGGACATCACCCTGGTCGCGCGCGGCC AGGAGCACGTCAACTCCACCTTCCCGCAGCTCATGCTGTACCAGGCGCTGGGGTGGACGCCTCCCGACTTCGCCCACCTG CCGCTCATCCTGGGCCCGGACCGCGAGAAGCTGTCCAAGCGCAAGCACCCGGAAGCGGACGTGATGGTGCACAAGCGCAA CGGCGTCATGCCGGAGGCGCTGCTCAACTTCGTCATCCGCCTGGGCTGGAGCCACGGCAACGACGAGGTCATCAGCCGCG AACAGATGCTCGAGTGGTTCGACTTCAGCGACGTGGGCACCACCTCCGGCGTGTGGAACCCGGAGAAGCTGCTGTGGCTC AACCAGCAGTGGATGAAGCAGTTGCCGGTGGAGACCGTGGTGGAGCGGCTGCTCCCCTTCCTGGAGGCGAAGGGCATCCA GGCGAAGGGCGACCCGCGGCTGGAGACGCTGGTGCGCACGCTGCGCGAGCGCTCCAACACCCTGGAAGACATCGCCACCA CCGCGGCCAACGTCTACTTCCGCTCCGGCATCACCCTGGACGAGAAGGCCGCCACCAAGCACCTCTCCGGAGAGTCCCTC AACCTGCTGCGCAAGGTGCGCGAGACGCTCACCGCGCTGCCGGAGTGGTCGGTGGAGGCGCTGGACGGCGTGGTGAAGCA GGTGAGCGAGGCCTCCAGCGTCGGCATGGGCAAGGTGGCGCAGCCCATCCGCGTGGCACTCACTGGCAACACCACCAGCC CGGGCATCGGCGAGACGCTGGTGCTGGTAGGCCGCGACGAATCCCTGCTGCGCATCGACGCGGCGCTGACGCGCGGTTGA
Upstream 100 bases:
>100_bases GACGAATCGACATACGAGTTCTCCCTGGCCATCCAACTTACTCCAGGAATGCCCCTCCGCGTTGACCCTCCATCCTCGCC CTGCTAATCCGCGCGCCCGT
Downstream 100 bases:
>100_bases GCCATCAGGCGCAGGTAGCGGTGGACGTCAGCAGCGCAGGCCCCTATCTTTCGGACCCATGATGCGTGCCCTTGACAGCC TGAAACGTGGTTTCTATAAG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MPPALRVRFAPSPTGYLHIGGARTALMNFLQARRQGGTFVLRMEDTDQGRSTPESVQAILDGLNWLGIDWDEGPGKEGPY APYFQMQRLDTYRKHADQLIAEGKAYRCYCTKEDLDAQRQVAEKAGGAFKYPGTCRERTEPPAGRNAADAVIRFKMPAGD GSVSFTDKALGTITKTHSDLDDWVMMRADGIPVYNFGCVIDDHLMDITLVARGQEHVNSTFPQLMLYQALGWTPPDFAHL PLILGPDREKLSKRKHPEADVMVHKRNGVMPEALLNFVIRLGWSHGNDEVISREQMLEWFDFSDVGTTSGVWNPEKLLWL NQQWMKQLPVETVVERLLPFLEAKGIQAKGDPRLETLVRTLRERSNTLEDIATTAANVYFRSGITLDEKAATKHLSGESL NLLRKVRETLTALPEWSVEALDGVVKQVSEASSVGMGKVAQPIRVALTGNTTSPGIGETLVLVGRDESLLRIDAALTRG
Sequences:
>Translated_479_residues MPPALRVRFAPSPTGYLHIGGARTALMNFLQARRQGGTFVLRMEDTDQGRSTPESVQAILDGLNWLGIDWDEGPGKEGPY APYFQMQRLDTYRKHADQLIAEGKAYRCYCTKEDLDAQRQVAEKAGGAFKYPGTCRERTEPPAGRNAADAVIRFKMPAGD GSVSFTDKALGTITKTHSDLDDWVMMRADGIPVYNFGCVIDDHLMDITLVARGQEHVNSTFPQLMLYQALGWTPPDFAHL PLILGPDREKLSKRKHPEADVMVHKRNGVMPEALLNFVIRLGWSHGNDEVISREQMLEWFDFSDVGTTSGVWNPEKLLWL NQQWMKQLPVETVVERLLPFLEAKGIQAKGDPRLETLVRTLRERSNTLEDIATTAANVYFRSGITLDEKAATKHLSGESL NLLRKVRETLTALPEWSVEALDGVVKQVSEASSVGMGKVAQPIRVALTGNTTSPGIGETLVLVGRDESLLRIDAALTRG >Mature_478_residues PPALRVRFAPSPTGYLHIGGARTALMNFLQARRQGGTFVLRMEDTDQGRSTPESVQAILDGLNWLGIDWDEGPGKEGPYA PYFQMQRLDTYRKHADQLIAEGKAYRCYCTKEDLDAQRQVAEKAGGAFKYPGTCRERTEPPAGRNAADAVIRFKMPAGDG SVSFTDKALGTITKTHSDLDDWVMMRADGIPVYNFGCVIDDHLMDITLVARGQEHVNSTFPQLMLYQALGWTPPDFAHLP LILGPDREKLSKRKHPEADVMVHKRNGVMPEALLNFVIRLGWSHGNDEVISREQMLEWFDFSDVGTTSGVWNPEKLLWLN QQWMKQLPVETVVERLLPFLEAKGIQAKGDPRLETLVRTLRERSNTLEDIATTAANVYFRSGITLDEKAATKHLSGESLN LLRKVRETLTALPEWSVEALDGVVKQVSEASSVGMGKVAQPIRVALTGNTTSPGIGETLVLVGRDESLLRIDAALTRG
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=500, Percent_Identity=32.2, Blast_Score=237, Evalue=2e-62, Organism=Escherichia coli, GI1788743, Length=472, Percent_Identity=42.7966101694915, Blast_Score=396, Evalue=1e-111, Organism=Escherichia coli, GI226510925, Length=295, Percent_Identity=34.9152542372881, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI1786895, Length=212, Percent_Identity=27.8301886792453, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71993394, Length=476, Percent_Identity=32.9831932773109, Blast_Score=253, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6324540, Length=500, Percent_Identity=31.6, Blast_Score=220, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6324742, Length=137, Percent_Identity=32.8467153284672, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24665321, Length=494, Percent_Identity=33.8056680161943, Blast_Score=256, Evalue=2e-68,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_MYXXD (Q1D8Y1)
Other databases:
- EMBL: CP000113 - RefSeq: YP_630892.1 - ProteinModelPortal: Q1D8Y1 - SMR: Q1D8Y1 - STRING: Q1D8Y1 - GeneID: 4103882 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_2675 - TIGR: MXAN_2675 - eggNOG: COG0008 - HOGENOM: HBG628189 - OMA: NEIFAKR - PhylomeDB: Q1D8Y1 - BioCyc: MXAN246197:MXAN_2675-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 53209; Mature: 53078
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 253-253
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPALRVRFAPSPTGYLHIGGARTALMNFLQARRQGGTFVLRMEDTDQGRSTPESVQAIL CCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHH DGLNWLGIDWDEGPGKEGPYAPYFQMQRLDTYRKHADQLIAEGKAYRCYCTKEDLDAQRQ CCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHCCCHHHH VAEKAGGAFKYPGTCRERTEPPAGRNAADAVIRFKMPAGDGSVSFTDKALGTITKTHSDL HHHHCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEEECCCCCCCEECHHHHHHHHHCCCCH DDWVMMRADGIPVYNFGCVIDDHLMDITLVARGQEHVNSTFPQLMLYQALGWTPPDFAHL HHHHEEEECCCCEEEECCEEECCHHEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCC PLILGPDREKLSKRKHPEADVMVHKRNGVMPEALLNFVIRLGWSHGNDEVISREQMLEWF CEEECCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH DFSDVGTTSGVWNPEKLLWLNQQWMKQLPVETVVERLLPFLEAKGIQAKGDPRLETLVRT CCCCCCCCCCCCCCHHEEEECHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LRERSNTLEDIATTAANVYFRSGITLDEKAATKHLSGESLNLLRKVRETLTALPEWSVEA HHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHH LDGVVKQVSEASSVGMGKVAQPIRVALTGNTTSPGIGETLVLVGRDESLLRIDAALTRG HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEHHHHCCC >Mature Secondary Structure PPALRVRFAPSPTGYLHIGGARTALMNFLQARRQGGTFVLRMEDTDQGRSTPESVQAIL CCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHH DGLNWLGIDWDEGPGKEGPYAPYFQMQRLDTYRKHADQLIAEGKAYRCYCTKEDLDAQRQ CCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHCCCHHHH VAEKAGGAFKYPGTCRERTEPPAGRNAADAVIRFKMPAGDGSVSFTDKALGTITKTHSDL HHHHCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEEECCCCCCCEECHHHHHHHHHCCCCH DDWVMMRADGIPVYNFGCVIDDHLMDITLVARGQEHVNSTFPQLMLYQALGWTPPDFAHL HHHHEEEECCCCEEEECCEEECCHHEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCC PLILGPDREKLSKRKHPEADVMVHKRNGVMPEALLNFVIRLGWSHGNDEVISREQMLEWF CEEECCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH DFSDVGTTSGVWNPEKLLWLNQQWMKQLPVETVVERLLPFLEAKGIQAKGDPRLETLVRT CCCCCCCCCCCCCCHHEEEECHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LRERSNTLEDIATTAANVYFRSGITLDEKAATKHLSGESLNLLRKVRETLTALPEWSVEA HHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHH LDGVVKQVSEASSVGMGKVAQPIRVALTGNTTSPGIGETLVLVGRDESLLRIDAALTRG HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA