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The map label for this gene is ytrF [H]

Identifier: 108760326

GI number: 108760326

Start: 2837875

End: 2839983

Strand: Reverse

Name: ytrF [H]

Synonym: MXAN_2429

Alternate gene names: 108760326

Gene position: 2839983-2837875 (Counterclockwise)

Preceding gene: 108762086

Following gene: 108758874

Centisome position: 31.07

GC content: 66.05

Gene sequence:

>2109_bases
ATGGGACAACTCCGTTTGCTGCTGCAGGTAGCCTTCCGCAACCTGTTCTCCAGCAAGATCAACCTGCTCATCGGCGGCAT
CATCTTCTTCGGCACCCTGCTCGTGGTGGTGGGCGGAGCGCTGATGGACAGCATGGACAGCGCGATGAGCCGCAGCATCA
TCGGCAGCGTCGCGGGCCACATCCAGGTCTACTCGGATGACTCCAAGGACCCGCTGGCCCTCTACGGCAGCATGAGCGGC
GAGCCGGACCTGGCCGCGCTGGACGACTTCAGCCAACTCCGGCCCTTCCTGGAGAAGCACCCCAACGTGAAGACGGTGGT
GCCCCTGGGCACCAGCGGCGCCATCGTCACCTCCGGCAACACGGTGGACCTGACGCTGTCGAACCTGCGCGCGCTCTACA
AGAAGCGCGACGAGGCCGGTGAGACGCCCGAGCTGCGGGAGAGCATCGACAGCGTCAAGGGGCACGTGCGGCAGATGGTC
GACCTGATGGCCGACCAGACGGCCAAGAGCGAGCAGGAGCTGGGCGGCGCCCAGAAGGACCCCGCGGAGGTGGAAGCACT
CGCCCGGGCGCGCACGGACGCGTTCTGGGACGCCTTCGAGGAGGCCCCGTACACCGCGCTGGAGCTGTTGGAGAACCGCA
TCGCCCCACAGATTCCGGACGGGGACATGCTGGAGCTGCGCTACGCCGGCACGGACCTGGACGCGTTCCAGCGCACCTTC
GACCGCATGGAGATCGTGGACGGACAGCCGGTGCCCACCGGGCAGCGAGGCATGCTGCTGTCCAAGTTCTTCTACGAAGA
GTTCCTCAAGATGAAGTCGGCGCTCCGGCTGGACCACATCAAGCAGGAGCGGGACCTCAACCAGAAGGCCATCGCCACCG
ACCCGGACCTGCAGCGCTGGGTGAAGGAGAACCAGACGCAGACGCGGGAAATCATCTTCCAGTTGGACCCCGTCAAGACG
CGGAAGATGGTGGAGCGGCTGCAGAAGCTGCTGGGCAGCCAGGAGCCCGCGCTGGACAAGCTGCTGACGCAGTTCTTCAC
CACCGACGACGCCAACTTCGACACCCGCTACGCCCAGTTCTACTCGGAGCTGGCACCGCTGCTGGAGCTCTACCGGCTGC
GCATGGGGGACGTGCTCACCATCACCGCCTTCACGCGCACCGGCTACATGCAGAGCGTCAACGTGAAGGTCTACGGCACC
TACCAGTTCAAGGGCCTGGAGAAGTCCGCCATGGCCGGCGCGCTGAGCCTGATGGACCTGATGTCGTTCCGGGACCTGTA
CGGGTACCTCACCGCGGACAAGAAGGCGGAGCTGGCGGAAATCCAGAAGCAGAGCGGCCTGGAAGCCCTCAGCCGGGACG
AGGCCGAGGAGGCCCTCTTCGGTGAGGCCAGCGACAACGAGTTGGTGGCCGAGGCCACGTCCAGCGACGTGGACGACCAG
GCCGCCTTCACCGGAGACCAGGGGGCGCTCACGCGTGAGAACCTGCTCCAGCGCGTCTACACCCAGCAGGAAATCGAGCA
AGGCGTGGCCCTGAGCGCGGCGGTGATGCTCAAGGACCCGGAGCTGCTGGAACAGACGATGGTGGAGCTGCGGCAGGCGG
CGAAGGATGCGGGCCTGAAGCTGCGCGTGGTGTCCTGGCAGGAGGCGGCGGGCATCATCGGGCAGTTCGTGCTGCTCGGG
AAGCTGGTGCTCTACTTCGCCGTCTTCATCATCTTCGTGGTGGCACTGGTCATCATCAACAACGCCATGATGATGGCCAC
CATGCAGCGCGTGCGCGAGGTGGGAACGATGCGGGCCATTGGCGCGCAGCGCTCCTTCATCCTGGGCATGGTGCTGGTGG
AGACGCTGGTGCTGGGGCTCGTGTTCGGCTCGGCCGGCTCACTGGTGGGCAGCGGCATCATGGCCCTGCTCAACAGCGCT
GGCATCCCCGCGGGCAACGAAGCGCTCTACTTCTTCTTCTCCGGCCCCCGGCTGTTCCCCACGCTGAGCGCCAGCAACCT
GGTGGCGGCGTTCGTGATCGTCCTGGGCGTCTCCGCCATCTCCACCCTCTATCCCGCGTTCCTCGCGACCCGGGTCTCGC
CCCTCCAGGCGATGCAGACGGACGAGTGA

Upstream 100 bases:

>100_bases
GCCACGCCAACGCGGTGGTGCGGCTGGCGGACGGCAAGTTCCTGGACCGCATCAGCGCCGCCGAGGCCAGCCGCGCCATG
GCCTCTGGAGGCCACTGACC

Downstream 100 bases:

>100_bases
GAACATGCTCCAGCTCTTCCTCATCGCATTCCGCAACCTCGGCACCCACCGCAGGCGCACCCTGCTGCTGGGCGGCGCCA
TCGCCAGCGTCACCGCGCTG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 702; Mature: 701

Protein sequence:

>702_residues
MGQLRLLLQVAFRNLFSSKINLLIGGIIFFGTLLVVVGGALMDSMDSAMSRSIIGSVAGHIQVYSDDSKDPLALYGSMSG
EPDLAALDDFSQLRPFLEKHPNVKTVVPLGTSGAIVTSGNTVDLTLSNLRALYKKRDEAGETPELRESIDSVKGHVRQMV
DLMADQTAKSEQELGGAQKDPAEVEALARARTDAFWDAFEEAPYTALELLENRIAPQIPDGDMLELRYAGTDLDAFQRTF
DRMEIVDGQPVPTGQRGMLLSKFFYEEFLKMKSALRLDHIKQERDLNQKAIATDPDLQRWVKENQTQTREIIFQLDPVKT
RKMVERLQKLLGSQEPALDKLLTQFFTTDDANFDTRYAQFYSELAPLLELYRLRMGDVLTITAFTRTGYMQSVNVKVYGT
YQFKGLEKSAMAGALSLMDLMSFRDLYGYLTADKKAELAEIQKQSGLEALSRDEAEEALFGEASDNELVAEATSSDVDDQ
AAFTGDQGALTRENLLQRVYTQQEIEQGVALSAAVMLKDPELLEQTMVELRQAAKDAGLKLRVVSWQEAAGIIGQFVLLG
KLVLYFAVFIIFVVALVIINNAMMMATMQRVREVGTMRAIGAQRSFILGMVLVETLVLGLVFGSAGSLVGSGIMALLNSA
GIPAGNEALYFFFSGPRLFPTLSASNLVAAFVIVLGVSAISTLYPAFLATRVSPLQAMQTDE

Sequences:

>Translated_702_residues
MGQLRLLLQVAFRNLFSSKINLLIGGIIFFGTLLVVVGGALMDSMDSAMSRSIIGSVAGHIQVYSDDSKDPLALYGSMSG
EPDLAALDDFSQLRPFLEKHPNVKTVVPLGTSGAIVTSGNTVDLTLSNLRALYKKRDEAGETPELRESIDSVKGHVRQMV
DLMADQTAKSEQELGGAQKDPAEVEALARARTDAFWDAFEEAPYTALELLENRIAPQIPDGDMLELRYAGTDLDAFQRTF
DRMEIVDGQPVPTGQRGMLLSKFFYEEFLKMKSALRLDHIKQERDLNQKAIATDPDLQRWVKENQTQTREIIFQLDPVKT
RKMVERLQKLLGSQEPALDKLLTQFFTTDDANFDTRYAQFYSELAPLLELYRLRMGDVLTITAFTRTGYMQSVNVKVYGT
YQFKGLEKSAMAGALSLMDLMSFRDLYGYLTADKKAELAEIQKQSGLEALSRDEAEEALFGEASDNELVAEATSSDVDDQ
AAFTGDQGALTRENLLQRVYTQQEIEQGVALSAAVMLKDPELLEQTMVELRQAAKDAGLKLRVVSWQEAAGIIGQFVLLG
KLVLYFAVFIIFVVALVIINNAMMMATMQRVREVGTMRAIGAQRSFILGMVLVETLVLGLVFGSAGSLVGSGIMALLNSA
GIPAGNEALYFFFSGPRLFPTLSASNLVAAFVIVLGVSAISTLYPAFLATRVSPLQAMQTDE
>Mature_701_residues
GQLRLLLQVAFRNLFSSKINLLIGGIIFFGTLLVVVGGALMDSMDSAMSRSIIGSVAGHIQVYSDDSKDPLALYGSMSGE
PDLAALDDFSQLRPFLEKHPNVKTVVPLGTSGAIVTSGNTVDLTLSNLRALYKKRDEAGETPELRESIDSVKGHVRQMVD
LMADQTAKSEQELGGAQKDPAEVEALARARTDAFWDAFEEAPYTALELLENRIAPQIPDGDMLELRYAGTDLDAFQRTFD
RMEIVDGQPVPTGQRGMLLSKFFYEEFLKMKSALRLDHIKQERDLNQKAIATDPDLQRWVKENQTQTREIIFQLDPVKTR
KMVERLQKLLGSQEPALDKLLTQFFTTDDANFDTRYAQFYSELAPLLELYRLRMGDVLTITAFTRTGYMQSVNVKVYGTY
QFKGLEKSAMAGALSLMDLMSFRDLYGYLTADKKAELAEIQKQSGLEALSRDEAEEALFGEASDNELVAEATSSDVDDQA
AFTGDQGALTRENLLQRVYTQQEIEQGVALSAAVMLKDPELLEQTMVELRQAAKDAGLKLRVVSWQEAAGIIGQFVLLGK
LVLYFAVFIIFVVALVIINNAMMMATMQRVREVGTMRAIGAQRSFILGMVLVETLVLGLVFGSAGSLVGSGIMALLNSAG
IPAGNEALYFFFSGPRLFPTLSASNLVAAFVIVLGVSAISTLYPAFLATRVSPLQAMQTDE

Specific function: Part of the ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential). Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 77262; Mature: 77131

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQLRLLLQVAFRNLFSSKINLLIGGIIFFGTLLVVVGGALMDSMDSAMSRSIIGSVAGH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IQVYSDDSKDPLALYGSMSGEPDLAALDDFSQLRPFLEKHPNVKTVVPLGTSGAIVTSGN
EEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCC
TVDLTLSNLRALYKKRDEAGETPELRESIDSVKGHVRQMVDLMADQTAKSEQELGGAQKD
EEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
PAEVEALARARTDAFWDAFEEAPYTALELLENRIAPQIPDGDMLELRYAGTDLDAFQRTF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHH
DRMEIVDGQPVPTGQRGMLLSKFFYEEFLKMKSALRLDHIKQERDLNQKAIATDPDLQRW
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
VKENQTQTREIIFQLDPVKTRKMVERLQKLLGSQEPALDKLLTQFFTTDDANFDTRYAQF
HHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
YSELAPLLELYRLRMGDVLTITAFTRTGYMQSVNVKVYGTYQFKGLEKSAMAGALSLMDL
HHHHHHHHHHHHHHCCCEEEEEEEHHCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHH
MSFRDLYGYLTADKKAELAEIQKQSGLEALSRDEAEEALFGEASDNELVAEATSSDVDDQ
HHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEHCCCCCCCCCH
AAFTGDQGALTRENLLQRVYTQQEIEQGVALSAAVMLKDPELLEQTMVELRQAAKDAGLK
HHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCE
LRVVSWQEAAGIIGQFVLLGKLVLYFAVFIIFVVALVIINNAMMMATMQRVREVGTMRAI
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GAQRSFILGMVLVETLVLGLVFGSAGSLVGSGIMALLNSAGIPAGNEALYFFFSGPRLFP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEECC
TLSASNLVAAFVIVLGVSAISTLYPAFLATRVSPLQAMQTDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
GQLRLLLQVAFRNLFSSKINLLIGGIIFFGTLLVVVGGALMDSMDSAMSRSIIGSVAGH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IQVYSDDSKDPLALYGSMSGEPDLAALDDFSQLRPFLEKHPNVKTVVPLGTSGAIVTSGN
EEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCC
TVDLTLSNLRALYKKRDEAGETPELRESIDSVKGHVRQMVDLMADQTAKSEQELGGAQKD
EEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
PAEVEALARARTDAFWDAFEEAPYTALELLENRIAPQIPDGDMLELRYAGTDLDAFQRTF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHH
DRMEIVDGQPVPTGQRGMLLSKFFYEEFLKMKSALRLDHIKQERDLNQKAIATDPDLQRW
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
VKENQTQTREIIFQLDPVKTRKMVERLQKLLGSQEPALDKLLTQFFTTDDANFDTRYAQF
HHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
YSELAPLLELYRLRMGDVLTITAFTRTGYMQSVNVKVYGTYQFKGLEKSAMAGALSLMDL
HHHHHHHHHHHHHHCCCEEEEEEEHHCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHH
MSFRDLYGYLTADKKAELAEIQKQSGLEALSRDEAEEALFGEASDNELVAEATSSDVDDQ
HHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEHCCCCCCCCCH
AAFTGDQGALTRENLLQRVYTQQEIEQGVALSAAVMLKDPELLEQTMVELRQAAKDAGLK
HHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCE
LRVVSWQEAAGIIGQFVLLGKLVLYFAVFIIFVVALVIINNAMMMATMQRVREVGTMRAI
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GAQRSFILGMVLVETLVLGLVFGSAGSLVGSGIMALLNSAGIPAGNEALYFFFSGPRLFP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEECC
TLSASNLVAAFVIVLGVSAISTLYPAFLATRVSPLQAMQTDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]