| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760289
Identifier: 108760289
GI number: 108760289
Start: 936037
End: 938799
Strand: Direct
Name: 108760289
Synonym: MXAN_0821
Alternate gene names: NA
Gene position: 936037-938799 (Clockwise)
Preceding gene: 108756868
Following gene: 108757308
Centisome position: 10.24
GC content: 69.89
Gene sequence:
>2763_bases ATGCTTGGACACGCCATGTCCTCCACCCTGAAAGCCCGAGGCGCGCTCGTCGCGGCCTCGCTCCTGCTGGCGGCGCCCGT GCTCGCGCAGGCACCCCAGGCCGGCGCGCCTCCCACGGACGCGGCCACGCCACCTGCGGCGCAGGCCCAGCCCACCATCA CCAAGCCTCCCGAACTGGTGCAGCAGGTGGAGGCGCAGTACCCGCCCGAGGCGCTCGCGCAGGGGCTCACCGCGTCCGTG CGGCTCATCATCACCATCGCGGATGACGGCTCCGTCGCCGAGGTGCTGCCCACCGAGCCGGTGGGCAACGGCTTCGACGA GGCGGCCATCGCGGCGGTGCGCCAGTTCCGCTTCTCGCCCGCCGAGGTCGACGGCGTGCCCGCGCCGGTGCAGGTGGAGT ATGTCTACCACTTCACCCTCACCGCGCCGGAGCCGGAGGCGGGCGCCGAGGCCGTGGAGGCCGAGCAGCCCAAGGCCACG CTCACCGGTCAGCTCATCTCCCGCGGCAGCCGTTCGCGCGTGCCCAACGCCACCGTGCGCTGCGGCGACGACGCGGACGC GCCCGAGGTGATGTCCGACGAGGACGGCCGCTTCACGCTCGAGGTGCCCGCGGGCACCTGCGAGGTGCGCGTGGTGGCCA CGGGCTTCCAGCTCTACCAGACGAAGGAGGAGCTGAAGGCGAACGAGACGACGGAGGTGAACTTCTACCTCGCGCCCTCG GGCGGCGGCCTGGAGACGGTGGTGCGCTCCGACCGGCCGAAGAAGGAGGTGGTGCGCCGCACCATCACTCGCGAGGAGGC GCAGAAGACGCCGGGCTCCTTCGGCGACCCCATCCGCGTCATCCAGTCGCTTCCGGGCGTGGCGCGCGCGCCCTTCATCT CCGGTGAGCTGCTGGTGCGTGGCTCGAACCCGGGCCAGACGTCGACGATGATGGACGGGGTCGAAATCCCCCTCCTGTTC CACCTGCTCGGCGGACCCTCGGTGGTCAACGCTGAGTTCATCGACCAGCTCGACTTCTTCCCGGGCGGTTACGGCAGCCA GTACGGCCGCGCGGTGGGCGGCATCGTCGAGGTGGGCACGCGCAAGGGCGCCTCGGACACGCTGCACGGCTCGGTGAAGG TGGACCTGCTGGACGCGGGCTTCTTCCTGGAGAGCCCGATTACGGACGGCATCAGCGTGGCCGCGGCCGCCCGCCGTTCG TACATCGACGCGATTCTGCCCGCCGTCCTGCCGAAGACGGAGGGGGGCACGCTCTCCGTGGTGCCGCGTTATTGGGACTA CCAACTGCGCGTGGACTTCGGCGCGAAGCGCGGGACGCCCAACGACGACACAACCGTGACGGCGGGGGGCGCGCGCAGCT CCGGCTACATCATGGCCTTCGGCAGTGATGACCAGCTCCGCGTGGTGTCCACCGGCCCCGAGACGGAGCGGGACCTGGAG CTGGACACGCGCATGAACTTCCACCGGGTGAAGGGCGACTGGACCTACCGCAAGGGCGCGATGTGGTCCGTCTTCACGCC CTTCGTCGGCATGGACCGCAACAACATCGACTTCGGGCTCGCGCGGCAGGAGGGCAAGACGTACACGCTGGGCGCCCGCG AGGTGCTGGGCATCGAGCTGTCCTCCGCGCTCACCCTCCGCACGGGTCTGGACCTCGTCTTCGAGCACGAGCGCTACGAC GTGTCCTTCCCCGCGCCGGGCGGCATCGAGTACGTGCCCTTCCCCGGGGCCGAGCCGGTGGGCCAGCAGTTGGAGGAGCA GATTGCCCTGAGCGCCTTCGACGGCGCGCTCTTCCTGGAAGCGGACCTGCTGGTGGGGCGCTTCACCTTCACGCCGGGCG TGCGCGGCAACCTCCAGACGGTGGGCAACACGCGGAACCTGGCGCTGGACCCGCGACTCTGGGTCCGCTACGCGGCGACC TCACGCACCAACCTCAAGGGCTCGCTGGGCCTCTACAGCCAGCCGCCAGAGACGTTCCGCTTCATCACCGCGCCCTACGG CAACCCGGACCTCGCCTACCAGCGCGCGTTCCAGAGCAGCCTGGGCGTGGAGCACCGCATCACCGACGTGCTCAACGTGG ACGTCACCGGCTTCTTCAACCGCCGCTTCAACAACATCGTGTCGCCCGGCCAGCTCGTCGCCAACGAGGGCGGCGGCGTC TTCACGCTGCCGTACTCCAACGACGGCATCGGCCGCGCGTATGGCGTGGAGGTGATGCTGAAGAAGGAGCGCGCCTCCGC GACGGACAAGTGGTCCGGCTGGCTCTCGTACACCTTCAGCCGCGCGGAGGACGGGCGCGTGGGGCCGCCGCCCCAGGGCG GAGGGGCCTTCGGTGGCGGCAGCGTGCCGGACGACTCCACCTATGGCCTCAGCCCCTGGGACCAGACGCACATCCTCACG ATGGTGGCGGGCTATGTGCTGGGCAACGGCTGGGAGCTGGGTGGCCGCTTCCGCTACACCAGCGGCCGGCCCATGACGCC GCTGGCGAGCGGCCATGACGTCTACGACGCGGACCGCAATCGCTACAACGCGACGTTCGGTCCCTACTTCTCCGACCGCA CGGGCGGCTTCCACCAGCTGGACGTGCGCGTGGACAAGAGCTGGCGGTTCCAGAGCTGGACGCTCACGGCCTACCTGGAC GTGCAGAACCTCTACAACGCGAAGAACGTCGAGTTCGTCTTCAACGACTACCGGTTCCGTCGGGAGTACGAGGTGCCGGG CATCCCCATCCTCCCCGTGGTGGGTGTGAAAGGAAGCTTCTGA
Upstream 100 bases:
>100_bases CCGGCATGTCAGGGGTACCCATCCCCACGGGCATTGCCGGGATTCCACCTCGCCATCGCTCCGTCTCTCTTTCAGCGGGA GCGGCAACCCCCTCACCCGT
Downstream 100 bases:
>100_bases GATGAAGACCCTGCTCGAGTATGGCGGCCTGTTGCTGCTGCTGGGCGCCACCGCGTGTGTCGACGTCGAGGACCAGCCTT CGCGCGTCCACGACTTCCGT
Product: TonB family protein
Products: NA
Alternate protein names: NB Family Protein; NB-Dependent Receptor; Outer Membrane Protein; Nb-Dependent Receptor Plug; Ferric Aerobactin Receptor; NB Dependent Receptor; NB Dependent Outer Membrane Protein; Nb Family Protein; Nb-Dependent Receptor; NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Outer Membrane Receptor; Outer Membrane Receptor Proteins Mostly Fe Transport-Like; Outer Membrane Receptor Protein; Nb Domain Protein; NB Domain-Containing Protein; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 920; Mature: 920
Protein sequence:
>920_residues MLGHAMSSTLKARGALVAASLLLAAPVLAQAPQAGAPPTDAATPPAAQAQPTITKPPELVQQVEAQYPPEALAQGLTASV RLIITIADDGSVAEVLPTEPVGNGFDEAAIAAVRQFRFSPAEVDGVPAPVQVEYVYHFTLTAPEPEAGAEAVEAEQPKAT LTGQLISRGSRSRVPNATVRCGDDADAPEVMSDEDGRFTLEVPAGTCEVRVVATGFQLYQTKEELKANETTEVNFYLAPS GGGLETVVRSDRPKKEVVRRTITREEAQKTPGSFGDPIRVIQSLPGVARAPFISGELLVRGSNPGQTSTMMDGVEIPLLF HLLGGPSVVNAEFIDQLDFFPGGYGSQYGRAVGGIVEVGTRKGASDTLHGSVKVDLLDAGFFLESPITDGISVAAAARRS YIDAILPAVLPKTEGGTLSVVPRYWDYQLRVDFGAKRGTPNDDTTVTAGGARSSGYIMAFGSDDQLRVVSTGPETERDLE LDTRMNFHRVKGDWTYRKGAMWSVFTPFVGMDRNNIDFGLARQEGKTYTLGAREVLGIELSSALTLRTGLDLVFEHERYD VSFPAPGGIEYVPFPGAEPVGQQLEEQIALSAFDGALFLEADLLVGRFTFTPGVRGNLQTVGNTRNLALDPRLWVRYAAT SRTNLKGSLGLYSQPPETFRFITAPYGNPDLAYQRAFQSSLGVEHRITDVLNVDVTGFFNRRFNNIVSPGQLVANEGGGV FTLPYSNDGIGRAYGVEVMLKKERASATDKWSGWLSYTFSRAEDGRVGPPPQGGGAFGGGSVPDDSTYGLSPWDQTHILT MVAGYVLGNGWELGGRFRYTSGRPMTPLASGHDVYDADRNRYNATFGPYFSDRTGGFHQLDVRVDKSWRFQSWTLTAYLD VQNLYNAKNVEFVFNDYRFRREYEVPGIPILPVVGVKGSF
Sequences:
>Translated_920_residues MLGHAMSSTLKARGALVAASLLLAAPVLAQAPQAGAPPTDAATPPAAQAQPTITKPPELVQQVEAQYPPEALAQGLTASV RLIITIADDGSVAEVLPTEPVGNGFDEAAIAAVRQFRFSPAEVDGVPAPVQVEYVYHFTLTAPEPEAGAEAVEAEQPKAT LTGQLISRGSRSRVPNATVRCGDDADAPEVMSDEDGRFTLEVPAGTCEVRVVATGFQLYQTKEELKANETTEVNFYLAPS GGGLETVVRSDRPKKEVVRRTITREEAQKTPGSFGDPIRVIQSLPGVARAPFISGELLVRGSNPGQTSTMMDGVEIPLLF HLLGGPSVVNAEFIDQLDFFPGGYGSQYGRAVGGIVEVGTRKGASDTLHGSVKVDLLDAGFFLESPITDGISVAAAARRS YIDAILPAVLPKTEGGTLSVVPRYWDYQLRVDFGAKRGTPNDDTTVTAGGARSSGYIMAFGSDDQLRVVSTGPETERDLE LDTRMNFHRVKGDWTYRKGAMWSVFTPFVGMDRNNIDFGLARQEGKTYTLGAREVLGIELSSALTLRTGLDLVFEHERYD VSFPAPGGIEYVPFPGAEPVGQQLEEQIALSAFDGALFLEADLLVGRFTFTPGVRGNLQTVGNTRNLALDPRLWVRYAAT SRTNLKGSLGLYSQPPETFRFITAPYGNPDLAYQRAFQSSLGVEHRITDVLNVDVTGFFNRRFNNIVSPGQLVANEGGGV FTLPYSNDGIGRAYGVEVMLKKERASATDKWSGWLSYTFSRAEDGRVGPPPQGGGAFGGGSVPDDSTYGLSPWDQTHILT MVAGYVLGNGWELGGRFRYTSGRPMTPLASGHDVYDADRNRYNATFGPYFSDRTGGFHQLDVRVDKSWRFQSWTLTAYLD VQNLYNAKNVEFVFNDYRFRREYEVPGIPILPVVGVKGSF >Mature_920_residues MLGHAMSSTLKARGALVAASLLLAAPVLAQAPQAGAPPTDAATPPAAQAQPTITKPPELVQQVEAQYPPEALAQGLTASV RLIITIADDGSVAEVLPTEPVGNGFDEAAIAAVRQFRFSPAEVDGVPAPVQVEYVYHFTLTAPEPEAGAEAVEAEQPKAT LTGQLISRGSRSRVPNATVRCGDDADAPEVMSDEDGRFTLEVPAGTCEVRVVATGFQLYQTKEELKANETTEVNFYLAPS GGGLETVVRSDRPKKEVVRRTITREEAQKTPGSFGDPIRVIQSLPGVARAPFISGELLVRGSNPGQTSTMMDGVEIPLLF HLLGGPSVVNAEFIDQLDFFPGGYGSQYGRAVGGIVEVGTRKGASDTLHGSVKVDLLDAGFFLESPITDGISVAAAARRS YIDAILPAVLPKTEGGTLSVVPRYWDYQLRVDFGAKRGTPNDDTTVTAGGARSSGYIMAFGSDDQLRVVSTGPETERDLE LDTRMNFHRVKGDWTYRKGAMWSVFTPFVGMDRNNIDFGLARQEGKTYTLGAREVLGIELSSALTLRTGLDLVFEHERYD VSFPAPGGIEYVPFPGAEPVGQQLEEQIALSAFDGALFLEADLLVGRFTFTPGVRGNLQTVGNTRNLALDPRLWVRYAAT SRTNLKGSLGLYSQPPETFRFITAPYGNPDLAYQRAFQSSLGVEHRITDVLNVDVTGFFNRRFNNIVSPGQLVANEGGGV FTLPYSNDGIGRAYGVEVMLKKERASATDKWSGWLSYTFSRAEDGRVGPPPQGGGAFGGGSVPDDSTYGLSPWDQTHILT MVAGYVLGNGWELGGRFRYTSGRPMTPLASGHDVYDADRNRYNATFGPYFSDRTGGFHQLDVRVDKSWRFQSWTLTAYLD VQNLYNAKNVEFVFNDYRFRREYEVPGIPILPVVGVKGSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99458; Mature: 99458
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGHAMSSTLKARGALVAASLLLAAPVLAQAPQAGAPPTDAATPPAAQAQPTITKPPELV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH QQVEAQYPPEALAQGLTASVRLIITIADDGSVAEVLPTEPVGNGFDEAAIAAVRQFRFSP HHHHHCCCHHHHHCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCC AEVDGVPAPVQVEYVYHFTLTAPEPEAGAEAVEAEQPKATLTGQLISRGSRSRVPNATVR CCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEE CGDDADAPEVMSDEDGRFTLEVPAGTCEVRVVATGFQLYQTKEELKANETTEVNFYLAPS ECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECHHHHHHHHHHCCCCCEEEEEEECCC GGGLETVVRSDRPKKEVVRRTITREEAQKTPGSFGDPIRVIQSLPGVARAPFISGELLVR CCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEE GSNPGQTSTMMDGVEIPLLFHLLGGPSVVNAEFIDQLDFFPGGYGSQYGRAVGGIVEVGT CCCCCCCHHHHCCCCCEEEEEECCCCCEECHHHHHHHHCCCCCCCCHHHHHHCCCEEECC RKGASDTLHGSVKVDLLDAGFFLESPITDGISVAAAARRSYIDAILPAVLPKTEGGTLSV CCCCCCCCCCEEEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE VPRYWDYQLRVDFGAKRGTPNDDTTVTAGGARSSGYIMAFGSDDQLRVVSTGPETERDLE EECCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCE LDTRMNFHRVKGDWTYRKGAMWSVFTPFVGMDRNNIDFGLARQEGKTYTLGAREVLGIEL ECCCCCEEEECCCEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCEEEECCCEEEEEEC SSALTLRTGLDLVFEHERYDVSFPAPGGIEYVPFPGAEPVGQQLEEQIALSAFDGALFLE CCEEEEECCCEEEEECCCEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEE ADLLVGRFTFTPGVRGNLQTVGNTRNLALDPRLWVRYAATSRTNLKGSLGLYSQPPETFR EEEEEEEEEECCCCCCCEEECCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEE FITAPYGNPDLAYQRAFQSSLGVEHRITDVLNVDVTGFFNRRFNNIVSPGQLVANEGGGV EEECCCCCCHHHHHHHHHHHCCCHHEEEEEEEEEEEEHHHHHHHCCCCCCCEEEECCCCE FTLPYSNDGIGRAYGVEVMLKKERASATDKWSGWLSYTFSRAEDGRVGPPPQGGGAFGGG EEECCCCCCCCCEECEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC SVPDDSTYGLSPWDQTHILTMVAGYVLGNGWELGGRFRYTSGRPMTPLASGHDVYDADRN CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCEEEECCCCCCCCCCCCCCCCCCCCC RYNATFGPYFSDRTGGFHQLDVRVDKSWRFQSWTLTAYLDVQNLYNAKNVEFVFNDYRFR CCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEEEEHHHHCCCCCEEEEECCEEEE REYEVPGIPILPVVGVKGSF EECCCCCCCEEEEECCCCCC >Mature Secondary Structure MLGHAMSSTLKARGALVAASLLLAAPVLAQAPQAGAPPTDAATPPAAQAQPTITKPPELV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH QQVEAQYPPEALAQGLTASVRLIITIADDGSVAEVLPTEPVGNGFDEAAIAAVRQFRFSP HHHHHCCCHHHHHCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCC AEVDGVPAPVQVEYVYHFTLTAPEPEAGAEAVEAEQPKATLTGQLISRGSRSRVPNATVR CCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEE CGDDADAPEVMSDEDGRFTLEVPAGTCEVRVVATGFQLYQTKEELKANETTEVNFYLAPS ECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECHHHHHHHHHHCCCCCEEEEEEECCC GGGLETVVRSDRPKKEVVRRTITREEAQKTPGSFGDPIRVIQSLPGVARAPFISGELLVR CCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEE GSNPGQTSTMMDGVEIPLLFHLLGGPSVVNAEFIDQLDFFPGGYGSQYGRAVGGIVEVGT CCCCCCCHHHHCCCCCEEEEEECCCCCEECHHHHHHHHCCCCCCCCHHHHHHCCCEEECC RKGASDTLHGSVKVDLLDAGFFLESPITDGISVAAAARRSYIDAILPAVLPKTEGGTLSV CCCCCCCCCCEEEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE VPRYWDYQLRVDFGAKRGTPNDDTTVTAGGARSSGYIMAFGSDDQLRVVSTGPETERDLE EECCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCE LDTRMNFHRVKGDWTYRKGAMWSVFTPFVGMDRNNIDFGLARQEGKTYTLGAREVLGIEL ECCCCCEEEECCCEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCEEEECCCEEEEEEC SSALTLRTGLDLVFEHERYDVSFPAPGGIEYVPFPGAEPVGQQLEEQIALSAFDGALFLE CCEEEEECCCEEEEECCCEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEE ADLLVGRFTFTPGVRGNLQTVGNTRNLALDPRLWVRYAATSRTNLKGSLGLYSQPPETFR EEEEEEEEEECCCCCCCEEECCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEE FITAPYGNPDLAYQRAFQSSLGVEHRITDVLNVDVTGFFNRRFNNIVSPGQLVANEGGGV EEECCCCCCHHHHHHHHHHHCCCHHEEEEEEEEEEEEHHHHHHHCCCCCCCEEEECCCCE FTLPYSNDGIGRAYGVEVMLKKERASATDKWSGWLSYTFSRAEDGRVGPPPQGGGAFGGG EEECCCCCCCCCEECEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC SVPDDSTYGLSPWDQTHILTMVAGYVLGNGWELGGRFRYTSGRPMTPLASGHDVYDADRN CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCEEEECCCCCCCCCCCCCCCCCCCCC RYNATFGPYFSDRTGGFHQLDVRVDKSWRFQSWTLTAYLDVQNLYNAKNVEFVFNDYRFR CCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEEEEHHHHCCCCCEEEEECCEEEE REYEVPGIPILPVVGVKGSF EECCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA