| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is albA [H]
Identifier: 108760287
GI number: 108760287
Start: 4726438
End: 4727436
Strand: Reverse
Name: albA [H]
Synonym: MXAN_3928
Alternate gene names: 108760287
Gene position: 4727436-4726438 (Counterclockwise)
Preceding gene: 108760244
Following gene: 108761873
Centisome position: 51.72
GC content: 63.56
Gene sequence:
>999_bases ATGTCCGCACGCATCAGAGAGCGTCAGGAGAGCTGGGGCACCATCATCTACGACAACCTCCGCGATGAGTTCTCTGCGAA GGTGTTCGAGGGCTGCGTGCCTGTGCCGCGGAGTCCCATCGGTTGTGGATGGCTCGTCACCGCGCCGTGCAACCTCGTGT GTATCCACTGCTACGGGAACGTCGAGGACCTGCCGTCGAAGCGGCTCTCCACGCCCCAGCAGCTCAAGGTGGCCGACGAA GTCATCCGCGCGGGAATCATGCGACAGATTCTCTCCGGCGGTGAGCCGTTGATGCGCCGAGACACGCTGAACGTCATCGA CAAGCTCACGGACCATGGTGTCGCCACCATCCTCGGTACCAACGGCACCTTCCTGACGCAGCAGATGATGAAGACGGTGT CTCGCTGCACGCGCGTGGAAATCAGCCTCGATTCCATGGACGAGCGGGTCAACAACGAGATTCGCCCCAGCCGCAACGCC AAGGGTAACACCTACCAGGAGACGCTCCGGGCCATGGGCCTGTGCGTGGACCATGGCGTGGCGCCGCGAATCCTGACCTG TCTCAACCGCCACAACAGCCAGCATGTCGAGGAGCTGGCCCAGTTCATCTACGAGCGGGGCATCCGCGACTGGGCCATCT CCTGGACGCTCTCCGCCGGCCGCGCGTATCACATCTACGGCGAGTTGATGCCGGAGGAGACGTCGCACGTCACCGCGGCC GTGGAGCGGCTGCGGGTGCGCTACCCGGACATGCAGATTCGCCTGTCGGACCGCACCGTCAACTACAGCCGCTACTACTT CCTCATCTGGCCAGACGGCATCATGGGCACCGAGGAGATCGTCACCGGCAAGAAGCTCTTCTTCGCCTCGCTGGTGACGG GCTCCGTCCAGGACGGTTGGAAGCAAGAGAACTACGACCTGGACGCACACTTCCGGAAGTGGGTGGGGGACCGCATCGAG GTCATTCCCGCGGAAGGCCGGAAGCCCCTGGTCGCATAG
Upstream 100 bases:
>100_bases CCTCCTGGGCGTGGTGTGTCTTTCGATTGGGCGGCTCAGATTCTTCAACCAAGGCTCTGCGGCCCATCGTCGGCTGCGGG GCTGTTCTTAATTCTTCGCC
Downstream 100 bases:
>100_bases GATGTCCGTGGCATGGAGCTGATTGACGTCATCGACACCCAGGGACAGGTGGTGGGGAGCGCGCCCCGCGACCAGATCTA CGGCCAGAAGCTGCCCCATC
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSARIRERQESWGTIIYDNLRDEFSAKVFEGCVPVPRSPIGCGWLVTAPCNLVCIHCYGNVEDLPSKRLSTPQQLKVADE VIRAGIMRQILSGGEPLMRRDTLNVIDKLTDHGVATILGTNGTFLTQQMMKTVSRCTRVEISLDSMDERVNNEIRPSRNA KGNTYQETLRAMGLCVDHGVAPRILTCLNRHNSQHVEELAQFIYERGIRDWAISWTLSAGRAYHIYGELMPEETSHVTAA VERLRVRYPDMQIRLSDRTVNYSRYYFLIWPDGIMGTEEIVTGKKLFFASLVTGSVQDGWKQENYDLDAHFRKWVGDRIE VIPAEGRKPLVA
Sequences:
>Translated_332_residues MSARIRERQESWGTIIYDNLRDEFSAKVFEGCVPVPRSPIGCGWLVTAPCNLVCIHCYGNVEDLPSKRLSTPQQLKVADE VIRAGIMRQILSGGEPLMRRDTLNVIDKLTDHGVATILGTNGTFLTQQMMKTVSRCTRVEISLDSMDERVNNEIRPSRNA KGNTYQETLRAMGLCVDHGVAPRILTCLNRHNSQHVEELAQFIYERGIRDWAISWTLSAGRAYHIYGELMPEETSHVTAA VERLRVRYPDMQIRLSDRTVNYSRYYFLIWPDGIMGTEEIVTGKKLFFASLVTGSVQDGWKQENYDLDAHFRKWVGDRIE VIPAEGRKPLVA >Mature_331_residues SARIRERQESWGTIIYDNLRDEFSAKVFEGCVPVPRSPIGCGWLVTAPCNLVCIHCYGNVEDLPSKRLSTPQQLKVADEV IRAGIMRQILSGGEPLMRRDTLNVIDKLTDHGVATILGTNGTFLTQQMMKTVSRCTRVEISLDSMDERVNNEIRPSRNAK GNTYQETLRAMGLCVDHGVAPRILTCLNRHNSQHVEELAQFIYERGIRDWAISWTLSAGRAYHIYGELMPEETSHVTAAV ERLRVRYPDMQIRLSDRTVNYSRYYFLIWPDGIMGTEEIVTGKKLFFASLVTGSVQDGWKQENYDLDAHFRKWVGDRIEV IPAEGRKPLVA
Specific function: Required for production of the bacteriocin subtilosin. May activate a metalloenzyme that catalyzes a modification of prosubtilosin [H]
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR008792 - InterPro: IPR007197 [H]
Pfam domain/function: PF05402 PqqD; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 37779; Mature: 37648
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARIRERQESWGTIIYDNLRDEFSAKVFEGCVPVPRSPIGCGWLVTAPCNLVCIHCYGN CCCHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEECCC VEDLPSKRLSTPQQLKVADEVIRAGIMRQILSGGEPLMRRDTLNVIDKLTDHGVATILGT HHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEC NGTFLTQQMMKTVSRCTRVEISLDSMDERVNNEIRPSRNAKGNTYQETLRAMGLCVDHGV CCHHHHHHHHHHHHHHHEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC APRILTCLNRHNSQHVEELAQFIYERGIRDWAISWTLSAGRAYHIYGELMPEETSHVTAA HHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHH VERLRVRYPDMQIRLSDRTVNYSRYYFLIWPDGIMGTEEIVTGKKLFFASLVTGSVQDGW HHHHHHCCCCEEEEEECCEECEEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHCCHHCCC KQENYDLDAHFRKWVGDRIEVIPAEGRKPLVA CCCCCCCHHHHHHHCCCCEEEEECCCCCCCCC >Mature Secondary Structure SARIRERQESWGTIIYDNLRDEFSAKVFEGCVPVPRSPIGCGWLVTAPCNLVCIHCYGN CCHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEECCC VEDLPSKRLSTPQQLKVADEVIRAGIMRQILSGGEPLMRRDTLNVIDKLTDHGVATILGT HHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEC NGTFLTQQMMKTVSRCTRVEISLDSMDERVNNEIRPSRNAKGNTYQETLRAMGLCVDHGV CCHHHHHHHHHHHHHHHEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC APRILTCLNRHNSQHVEELAQFIYERGIRDWAISWTLSAGRAYHIYGELMPEETSHVTAA HHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHH VERLRVRYPDMQIRLSDRTVNYSRYYFLIWPDGIMGTEEIVTGKKLFFASLVTGSVQDGW HHHHHHCCCCEEEEEECCEECEEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHCCHHCCC KQENYDLDAHFRKWVGDRIEVIPAEGRKPLVA CCCCCCCHHHHHHHCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 10572140; 10809709; 10809710 [H]