| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760201
Identifier: 108760201
GI number: 108760201
Start: 6745078
End: 6747069
Strand: Direct
Name: 108760201
Synonym: MXAN_5417
Alternate gene names: NA
Gene position: 6745078-6747069 (Clockwise)
Preceding gene: 108762795
Following gene: 108761234
Centisome position: 73.8
GC content: 71.64
Gene sequence:
>1992_bases ATGTGGAAACTCCATCTCGTCCCGCTTCTGTGTCTGCTCACCACCACTACCAGTTGCACCGAGCCGCCCGCTCCCCTCGC CCATGCGGTCCCGCGCCAGCGTCCCATTGCGAACCGATACATCGTCGTGCTCCGCCCGGAGGCCCGCGCCGCATCCCAGG GGCCCCAGAAGACGCGGGAGCACGTGTCGAACCTCGCCAAGACGCATGGCGCGAAGGTGCTCCACACCTATGCGCATGCG CTCCAGGGCTTCTCGGCGGAGCTGGACGACGCGCGCTTGGAGGCGCTGCGCGCCGACGAGCGCGTGGCCTTCATCGAGCA GGATGCATGGGTGCGCCCGCTCGTCACGGCGGAGACGGTGGCGTGGGGCCTGGACCGCGTGGACCAGGAGGACCTGCCCC TGGATGGTCTCTATCGCCCGGCGCTGAGCGGCGCGGGTGTCCACGCGTACGTGCTCGACACGGGCATCCGCTCCACGCAT GCCGAGTTCCAGGGACGCCTGGGCGAGGGCTTCGACGCGGTGGACCCCGACGGTGGCGCGGAGGACTGCGACGGGCACGG CACCCACGTCGCGGGCATCCTCGGTGGCACGACCTGGGGCGTGGCCCGGGCCGTGACGCTGCATCCCGTGCGCATCCTGA ACTGTGACGGAGAAGGCCCCCTGTCGGGCATCATCGCCGGCATCGACTGGGTCGCCGCCCATCACCAGTCCCCCGCGGTC GCCAACCTGAGCATCGGGCTGGAGGTCTCCGAGGCGCTGGACCAGGCGGTCCGCAACGTCGTGGCCGCCGGCGTCACCGC CGTGGTGGCCGCGGGCAACTTCGGCGTCAGCGCGTGCGACGAGTCTCCTGCTCGCGCGGCGGAAGCCCTCACCGTGGGCG CCACCAACGTGGAGGACTCCCGCGCGTCATTCTCGAATCACGGCCCCTGCGTCGACCTGTACGCGCCGGGCGAGGACATT CGCTCCGCCGGCATCGCCAACGACACGGCAAGCGAGGTCTTCTCCGGTACCTCCATGGCCACCCCTCACGTCGCCGGCGC CGCCGCGCTCTACCTGGAGATCCACCCCACCGCCACCCCGGCCCAGGTGATGGACGCGCTCGCGGGCGCCGCCATCTCGG GCCGCGTGAAGAACGCCGGGCCGGGCTCCCCCGACCTGCTGCTCCAGGCGGGCTTCCGCCGCTCGACGGGGGACGTCCAC CGCCCCTGGGCACACGTCGCAACGCCCTTCCCCTGGAGCACCGTGCGCGCCACCTCACGTGTGCGGGTGCTCGCCTGGGA CGATGCGGCGGTCCGGCGCGTGGACCTCTGGGTCAACGGCCTCCTGCGCGCCAGTGACGACACCCACCCCTTCGAGCTCG ACTGGGACACCCGGGAAGAGCTCAACGGCCCGGCCACCCTGGAGGTCCGCGCCTACGACACCGCGCTCAAGGCCTGGCGC GCCGCGCCCATGACGGTGACGGTGCGCAACCCCGACATCGCCGACTTCGATTCGACGCTCCAGGCGCCCCGCTGCGCCAC CCTCGCGTTCGCGTGCGACACCGGCGTGCTCGTGCGCGGCATGGGCACCGTGGGGCCAGAGCGCCATGCGCCCAACACGC TCGGCGCGAGCTGTGCGGATGGCATCGATGGCACCTACCTCATCACCGCGACGCTGGAGGGGCTGCGCGTCTCCAGCCAG GACGGCGGCCCTCTCACCGCCGGCAAGCCGGTGAAACTCACCGCGACCGCCTTCGGCTTCTTGCCCTTCCTGGAAGCGGT GGACCTCTTCCATGCGCCCGACGCGCGCAGCCCCCAATGGACACATGTCGCCCGGCTCCCGCTCGAAGAGACAGGGGCGC AGGAGCTATCCACCACCTTCACGCTGCCAGAGGGAGGGCTCCAGGCGATTCGCGGCATCCTCGGCACCCATCCCACCCCG GTCAGCTGCGCCCCGGGAGCCTGGACAGACCACGACGACCTCGTCTTCCCCGTGGCCCCCTCGAGTCGCTGA
Upstream 100 bases:
>100_bases AATCCCGACACCCGTGGCGTCCAAGCGGGCGCACCATGACGCCGCCCTCGCACAGGCATGACGCCTCCGCGAGAGGCGTC CCACCTCAGGCCCACGCCCC
Downstream 100 bases:
>100_bases AGGCCCACGGCAGCGCGCCGTTGTCGCCAGTGGGAGCGCGTCGTGTCCCCGCGTCGCGGGAAGCGTGAGCTTGCGAGGCC CCGGGCTCAGATGTAGCCAC
Product: S8A family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 663; Mature: 663
Protein sequence:
>663_residues MWKLHLVPLLCLLTTTTSCTEPPAPLAHAVPRQRPIANRYIVVLRPEARAASQGPQKTREHVSNLAKTHGAKVLHTYAHA LQGFSAELDDARLEALRADERVAFIEQDAWVRPLVTAETVAWGLDRVDQEDLPLDGLYRPALSGAGVHAYVLDTGIRSTH AEFQGRLGEGFDAVDPDGGAEDCDGHGTHVAGILGGTTWGVARAVTLHPVRILNCDGEGPLSGIIAGIDWVAAHHQSPAV ANLSIGLEVSEALDQAVRNVVAAGVTAVVAAGNFGVSACDESPARAAEALTVGATNVEDSRASFSNHGPCVDLYAPGEDI RSAGIANDTASEVFSGTSMATPHVAGAAALYLEIHPTATPAQVMDALAGAAISGRVKNAGPGSPDLLLQAGFRRSTGDVH RPWAHVATPFPWSTVRATSRVRVLAWDDAAVRRVDLWVNGLLRASDDTHPFELDWDTREELNGPATLEVRAYDTALKAWR AAPMTVTVRNPDIADFDSTLQAPRCATLAFACDTGVLVRGMGTVGPERHAPNTLGASCADGIDGTYLITATLEGLRVSSQ DGGPLTAGKPVKLTATAFGFLPFLEAVDLFHAPDARSPQWTHVARLPLEETGAQELSTTFTLPEGGLQAIRGILGTHPTP VSCAPGAWTDHDDLVFPVAPSSR
Sequences:
>Translated_663_residues MWKLHLVPLLCLLTTTTSCTEPPAPLAHAVPRQRPIANRYIVVLRPEARAASQGPQKTREHVSNLAKTHGAKVLHTYAHA LQGFSAELDDARLEALRADERVAFIEQDAWVRPLVTAETVAWGLDRVDQEDLPLDGLYRPALSGAGVHAYVLDTGIRSTH AEFQGRLGEGFDAVDPDGGAEDCDGHGTHVAGILGGTTWGVARAVTLHPVRILNCDGEGPLSGIIAGIDWVAAHHQSPAV ANLSIGLEVSEALDQAVRNVVAAGVTAVVAAGNFGVSACDESPARAAEALTVGATNVEDSRASFSNHGPCVDLYAPGEDI RSAGIANDTASEVFSGTSMATPHVAGAAALYLEIHPTATPAQVMDALAGAAISGRVKNAGPGSPDLLLQAGFRRSTGDVH RPWAHVATPFPWSTVRATSRVRVLAWDDAAVRRVDLWVNGLLRASDDTHPFELDWDTREELNGPATLEVRAYDTALKAWR AAPMTVTVRNPDIADFDSTLQAPRCATLAFACDTGVLVRGMGTVGPERHAPNTLGASCADGIDGTYLITATLEGLRVSSQ DGGPLTAGKPVKLTATAFGFLPFLEAVDLFHAPDARSPQWTHVARLPLEETGAQELSTTFTLPEGGLQAIRGILGTHPTP VSCAPGAWTDHDDLVFPVAPSSR >Mature_663_residues MWKLHLVPLLCLLTTTTSCTEPPAPLAHAVPRQRPIANRYIVVLRPEARAASQGPQKTREHVSNLAKTHGAKVLHTYAHA LQGFSAELDDARLEALRADERVAFIEQDAWVRPLVTAETVAWGLDRVDQEDLPLDGLYRPALSGAGVHAYVLDTGIRSTH AEFQGRLGEGFDAVDPDGGAEDCDGHGTHVAGILGGTTWGVARAVTLHPVRILNCDGEGPLSGIIAGIDWVAAHHQSPAV ANLSIGLEVSEALDQAVRNVVAAGVTAVVAAGNFGVSACDESPARAAEALTVGATNVEDSRASFSNHGPCVDLYAPGEDI RSAGIANDTASEVFSGTSMATPHVAGAAALYLEIHPTATPAQVMDALAGAAISGRVKNAGPGSPDLLLQAGFRRSTGDVH RPWAHVATPFPWSTVRATSRVRVLAWDDAAVRRVDLWVNGLLRASDDTHPFELDWDTREELNGPATLEVRAYDTALKAWR AAPMTVTVRNPDIADFDSTLQAPRCATLAFACDTGVLVRGMGTVGPERHAPNTLGASCADGIDGTYLITATLEGLRVSSQ DGGPLTAGKPVKLTATAFGFLPFLEAVDLFHAPDARSPQWTHVARLPLEETGAQELSTTFTLPEGGLQAIRGILGTHPTP VSCAPGAWTDHDDLVFPVAPSSR
Specific function: Serine proteinase with preferred activity for amino acids with aromatic side groups at the P1' side of the scissible bond [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI31317307, Length=343, Percent_Identity=35.5685131195335, Blast_Score=169, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6324576, Length=338, Percent_Identity=36.3905325443787, Blast_Score=195, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6320775, Length=411, Percent_Identity=30.6569343065693, Blast_Score=179, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6319893, Length=268, Percent_Identity=36.5671641791045, Blast_Score=165, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 - InterPro: IPR010259 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 69881; Mature: 69881
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKLHLVPLLCLLTTTTSCTEPPAPLAHAVPRQRPIANRYIVVLRPEARAASQGPQKTRE CCEEHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHH HVSNLAKTHGAKVLHTYAHALQGFSAELDDARLEALRADERVAFIEQDAWVRPLVTAETV HHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH AWGLDRVDQEDLPLDGLYRPALSGAGVHAYVLDTGIRSTHAEFQGRLGEGFDAVDPDGGA HHHHHHCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCC EDCDGHGTHVAGILGGTTWGVARAVTLHPVRILNCDGEGPLSGIIAGIDWVAAHHQSPAV CCCCCCCCEEEEECCCCHHHHHEEEEECCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCE ANLSIGLEVSEALDQAVRNVVAAGVTAVVAAGNFGVSACDESPARAAEALTVGATNVEDS EEEEECCCHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCCCCHHHHHHEEEECCCCCCHH RASFSNHGPCVDLYAPGEDIRSAGIANDTASEVFSGTSMATPHVAGAAALYLEIHPTATP HHCCCCCCCEEEEECCCHHHHHCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEEECCCCH AQVMDALAGAAISGRVKNAGPGSPDLLLQAGFRRSTGDVHRPWAHVATPFPWSTVRATSR HHHHHHHHCCHHCCCCCCCCCCCHHHHEECCCCCCCCCCCCCHHHCCCCCCCHHHHHCCE VRVLAWDDAAVRRVDLWVNGLLRASDDTHPFELDWDTREELNGPATLEVRAYDTALKAWR EEEEEECCHHHHHHHHHHHHHEECCCCCCCEEECCCCHHHCCCCEEEEEEEHHHHHHHHC AAPMTVTVRNPDIADFDSTLQAPRCATLAFACDTGVLVRGMGTVGPERHAPNTLGASCAD CCCEEEEECCCCCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHCC GIDGTYLITATLEGLRVSSQDGGPLTAGKPVKLTATAFGFLPFLEAVDLFHAPDARSPQW CCCCCEEEEEEECCEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCC THVARLPLEETGAQELSTTFTLPEGGLQAIRGILGTHPTPVSCAPGAWTDHDDLVFPVAP CEEEECCHHHCCCHHHHEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCC SSR CCC >Mature Secondary Structure MWKLHLVPLLCLLTTTTSCTEPPAPLAHAVPRQRPIANRYIVVLRPEARAASQGPQKTRE CCEEHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHH HVSNLAKTHGAKVLHTYAHALQGFSAELDDARLEALRADERVAFIEQDAWVRPLVTAETV HHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH AWGLDRVDQEDLPLDGLYRPALSGAGVHAYVLDTGIRSTHAEFQGRLGEGFDAVDPDGGA HHHHHHCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCC EDCDGHGTHVAGILGGTTWGVARAVTLHPVRILNCDGEGPLSGIIAGIDWVAAHHQSPAV CCCCCCCCEEEEECCCCHHHHHEEEEECCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCE ANLSIGLEVSEALDQAVRNVVAAGVTAVVAAGNFGVSACDESPARAAEALTVGATNVEDS EEEEECCCHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCCCCHHHHHHEEEECCCCCCHH RASFSNHGPCVDLYAPGEDIRSAGIANDTASEVFSGTSMATPHVAGAAALYLEIHPTATP HHCCCCCCCEEEEECCCHHHHHCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEEECCCCH AQVMDALAGAAISGRVKNAGPGSPDLLLQAGFRRSTGDVHRPWAHVATPFPWSTVRATSR HHHHHHHHCCHHCCCCCCCCCCCHHHHEECCCCCCCCCCCCCHHHCCCCCCCHHHHHCCE VRVLAWDDAAVRRVDLWVNGLLRASDDTHPFELDWDTREELNGPATLEVRAYDTALKAWR EEEEEECCHHHHHHHHHHHHHEECCCCCCCEEECCCCHHHCCCCEEEEEEEHHHHHHHHC AAPMTVTVRNPDIADFDSTLQAPRCATLAFACDTGVLVRGMGTVGPERHAPNTLGASCAD CCCEEEEECCCCCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHCC GIDGTYLITATLEGLRVSSQDGGPLTAGKPVKLTATAFGFLPFLEAVDLFHAPDARSPQW CCCCCEEEEEEECCEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCC THVARLPLEETGAQELSTTFTLPEGGLQAIRGILGTHPTPVSCAPGAWTDHDDLVFPVAP CEEEECCHHHCCCHHHHEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCC SSR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7551039; 1499549 [H]