| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is tar [C]
Identifier: 108760175
GI number: 108760175
Start: 1460059
End: 1461858
Strand: Direct
Name: tar [C]
Synonym: MXAN_1248
Alternate gene names: 108760175
Gene position: 1460059-1461858 (Clockwise)
Preceding gene: 108758365
Following gene: 108757462
Centisome position: 15.97
GC content: 69.0
Gene sequence:
>1800_bases ATGTGCCACATGAATGCCGAAGACAAGGTCATCCAGGAGTACCGGGGACGTGCGCTCAAGGTGTTCATGTTGTGGGTGCT GCCGGTGGCGCCCATCGCCGCGTATCTCAATGGCATGGCCATGGGCGTGGCGGGTTGGTCGGGCCTGATTGCGGTGGCGT GGGTGCTGCCGCCCATCATCGTGGGCCTGGGCATCGCCTATCCCGCGTTTGTGATGCACGTGCTGGTAAACGGCGCGCTG CGGGAGCGGCCGGAGGACACGCCCGGCGCGCGGCTGGAGCGAATCCTGCGCCTGCCGTGGCGCGCGGCGGTCGCATCCTC GTGGGGCGCGTGGACGCTGGGAGGTCTCTGGTTCAGCCTCCACGTGTGCCTGCTGTGGAAGAAGGACCTGTCCCTGGTCG TGGTGGGCACGCTCATCGGCATCTGCTTCGGCGTGGTGCAGGGCTTTCCCATCAGCGTCACGCTGGAGCGGTTGCTGTTG CCGCTGGCGCTGGAGGAGCAGCGCAAGGACCCGACGATGGCGCTCAAGGGCGGAGGCTTCTTCTGGCCGCGGCAGGCCTG GTTCATGCCCGTCACCTTCATTGGCTCCAGCATCTGCGCGTTGGTGCTGAGCGGGTGCGTGGTGCTGGTGAAGCTGCAAG GCGTCCGGGACGAACTGCACAATGCGCTGGTGGCGGAGGGCGCGCACGGCTCGGCGGAGACGCTGATGGGCATGGGCGGC ATGCTGGCGGGTGAATTGGCGTTCGGGCTGGCCTGGGTGGGCGGATTGCTGGCGATTCCCGCCGTCACCACCTGGATGCT GGCGCGTCGTCAGGCACACGCGGCGGGCGCGGTGGGCGTGGCCATCGAGTCACTGTCCGCGGGGCGCGTCGTCTCGCCCG CATGGGTGTCCACGGATGAGATGGGGGACTTGTCGGCTGGTATGAACGCGGTGCTCGTTCGCCTGCGGCAGTTGCCCCTG GCGCTCAATGCCTCCGCCACGCGGCTGAGCGGCGCGGGGCGCCACCTTCGGGATTCGCACGATGAGCACCAGCAGAGCCT GGTCCGTCAGGCGTCCGCGCTGCACGAGGCGCAGATGACGTCGGAGGAGATTCGGCGCACGTCGCTGATGGCCGTCGAGC GAGCGGAGGAGGTGCTTCAAGTGGCCCGCCGCTCGGAGGCCCTGGGACAGCAGGGAGAGTCCGCCGTGGAGCGGAGTCTC AACGGCCTGGCGGACATCCGCCGCGTGGTGGACGGCATCCAGGAACGGCTGACGCGGTTGGCCCAGAGCACCACGCAGAT TGGCGAAATCACCGAGACGGTGAAGGACCTGGCGGACCAGTCCCACCTCCTGGCGGTCAACGCGGCCATCGAGGCGGCGC GCTCGGGCGAGCAGGGGCGGGGCTTCGCGGTGGTGGCCCGCGAGATTCGCGGCCTGTCGGACCAGTCCATCCAGGCCACG CGGCGCATCCGCGGCATCCTCCAGGACATCAGCACGGGCATCCGCGACGCGGCGAAGATGGGGGAGGCCGGCGTGCAGAC CATTGGCACGGGCCTGGACCAGATGCGGGCGTCAGGGGACTCGCTGCGGGAGCTGTCTCGCATCGCCCAGGAGAACTCCA CCGCGGCCCGGCAGATTGCCGCCGCGGTGACACAGCAGGATGCCGGCTTCACGCAAATCTTCGACGCCATCGCGGACCTG TCGCAGCTCATGGACGCCACGCTGAAGCGGTTGGAGTCCACACAGGAGGCCACCGACACGCTGAGGGTCGTCTCCGACGA CGTGGCGCGGATGGCGCGGCAGTTCAACGCGACGGGGTGA
Upstream 100 bases:
>100_bases TCCGGATGACCCGCCTGTCCGCTTCGCGCGGAGAGTGCCGTACTTGCGGGTGAGGACTTCCGGCTCTGCCCTCGGGGTGT GAGCCCATGGCCTCGGGGGG
Downstream 100 bases:
>100_bases CGGATACGCCGTGGCCCGGCTTTCCACCCAACGGCAGCGTGAGGATGAAGCGCGTGTCTCCAGGCGCGGAGTCCAGCCGC AGCGCGCCGCCGTGCGCGAG
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 599; Mature: 599
Protein sequence:
>599_residues MCHMNAEDKVIQEYRGRALKVFMLWVLPVAPIAAYLNGMAMGVAGWSGLIAVAWVLPPIIVGLGIAYPAFVMHVLVNGAL RERPEDTPGARLERILRLPWRAAVASSWGAWTLGGLWFSLHVCLLWKKDLSLVVVGTLIGICFGVVQGFPISVTLERLLL PLALEEQRKDPTMALKGGGFFWPRQAWFMPVTFIGSSICALVLSGCVVLVKLQGVRDELHNALVAEGAHGSAETLMGMGG MLAGELAFGLAWVGGLLAIPAVTTWMLARRQAHAAGAVGVAIESLSAGRVVSPAWVSTDEMGDLSAGMNAVLVRLRQLPL ALNASATRLSGAGRHLRDSHDEHQQSLVRQASALHEAQMTSEEIRRTSLMAVERAEEVLQVARRSEALGQQGESAVERSL NGLADIRRVVDGIQERLTRLAQSTTQIGEITETVKDLADQSHLLAVNAAIEAARSGEQGRGFAVVAREIRGLSDQSIQAT RRIRGILQDISTGIRDAAKMGEAGVQTIGTGLDQMRASGDSLRELSRIAQENSTAARQIAAAVTQQDAGFTQIFDAIADL SQLMDATLKRLESTQEATDTLRVVSDDVARMARQFNATG
Sequences:
>Translated_599_residues MCHMNAEDKVIQEYRGRALKVFMLWVLPVAPIAAYLNGMAMGVAGWSGLIAVAWVLPPIIVGLGIAYPAFVMHVLVNGAL RERPEDTPGARLERILRLPWRAAVASSWGAWTLGGLWFSLHVCLLWKKDLSLVVVGTLIGICFGVVQGFPISVTLERLLL PLALEEQRKDPTMALKGGGFFWPRQAWFMPVTFIGSSICALVLSGCVVLVKLQGVRDELHNALVAEGAHGSAETLMGMGG MLAGELAFGLAWVGGLLAIPAVTTWMLARRQAHAAGAVGVAIESLSAGRVVSPAWVSTDEMGDLSAGMNAVLVRLRQLPL ALNASATRLSGAGRHLRDSHDEHQQSLVRQASALHEAQMTSEEIRRTSLMAVERAEEVLQVARRSEALGQQGESAVERSL NGLADIRRVVDGIQERLTRLAQSTTQIGEITETVKDLADQSHLLAVNAAIEAARSGEQGRGFAVVAREIRGLSDQSIQAT RRIRGILQDISTGIRDAAKMGEAGVQTIGTGLDQMRASGDSLRELSRIAQENSTAARQIAAAVTQQDAGFTQIFDAIADL SQLMDATLKRLESTQEATDTLRVVSDDVARMARQFNATG >Mature_599_residues MCHMNAEDKVIQEYRGRALKVFMLWVLPVAPIAAYLNGMAMGVAGWSGLIAVAWVLPPIIVGLGIAYPAFVMHVLVNGAL RERPEDTPGARLERILRLPWRAAVASSWGAWTLGGLWFSLHVCLLWKKDLSLVVVGTLIGICFGVVQGFPISVTLERLLL PLALEEQRKDPTMALKGGGFFWPRQAWFMPVTFIGSSICALVLSGCVVLVKLQGVRDELHNALVAEGAHGSAETLMGMGG MLAGELAFGLAWVGGLLAIPAVTTWMLARRQAHAAGAVGVAIESLSAGRVVSPAWVSTDEMGDLSAGMNAVLVRLRQLPL ALNASATRLSGAGRHLRDSHDEHQQSLVRQASALHEAQMTSEEIRRTSLMAVERAEEVLQVARRSEALGQQGESAVERSL NGLADIRRVVDGIQERLTRLAQSTTQIGEITETVKDLADQSHLLAVNAAIEAARSGEQGRGFAVVAREIRGLSDQSIQAT RRIRGILQDISTGIRDAAKMGEAGVQTIGTGLDQMRASGDSLRELSRIAQENSTAARQIAAAVTQQDAGFTQIFDAIADL SQLMDATLKRLESTQEATDTLRVVSDDVARMARQFNATG
Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788195, Length=248, Percent_Identity=27.8225806451613, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1787690, Length=156, Percent_Identity=35.2564102564103, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI2367378, Length=269, Percent_Identity=27.5092936802974, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1788194, Length=138, Percent_Identity=34.0579710144928, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1789453, Length=248, Percent_Identity=27.0161290322581, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003018 - InterPro: IPR003660 - InterPro: IPR016132 [H]
Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 64344; Mature: 64344
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCHMNAEDKVIQEYRGRALKVFMLWVLPVAPIAAYLNGMAMGVAGWSGLIAVAWVLPPII CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VGLGIAYPAFVMHVLVNGALRERPEDTPGARLERILRLPWRAAVASSWGAWTLGGLWFSL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHH HVCLLWKKDLSLVVVGTLIGICFGVVQGFPISVTLERLLLPLALEEQRKDPTMALKGGGF HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCC FWPRQAWFMPVTFIGSSICALVLSGCVVLVKLQGVRDELHNALVAEGAHGSAETLMGMGG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCH MLAGELAFGLAWVGGLLAIPAVTTWMLARRQAHAAGAVGVAIESLSAGRVVSPAWVSTDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC MGDLSAGMNAVLVRLRQLPLALNASATRLSGAGRHLRDSHDEHQQSLVRQASALHEAQMT CCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHH SEEIRRTSLMAVERAEEVLQVARRSEALGQQGESAVERSLNGLADIRRVVDGIQERLTRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQSTTQIGEITETVKDLADQSHLLAVNAAIEAARSGEQGRGFAVVAREIRGLSDQSIQAT HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHH RRIRGILQDISTGIRDAAKMGEAGVQTIGTGLDQMRASGDSLRELSRIAQENSTAARQIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHH AAVTQQDAGFTQIFDAIADLSQLMDATLKRLESTQEATDTLRVVSDDVARMARQFNATG HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MCHMNAEDKVIQEYRGRALKVFMLWVLPVAPIAAYLNGMAMGVAGWSGLIAVAWVLPPII CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VGLGIAYPAFVMHVLVNGALRERPEDTPGARLERILRLPWRAAVASSWGAWTLGGLWFSL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHH HVCLLWKKDLSLVVVGTLIGICFGVVQGFPISVTLERLLLPLALEEQRKDPTMALKGGGF HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCC FWPRQAWFMPVTFIGSSICALVLSGCVVLVKLQGVRDELHNALVAEGAHGSAETLMGMGG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCH MLAGELAFGLAWVGGLLAIPAVTTWMLARRQAHAAGAVGVAIESLSAGRVVSPAWVSTDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC MGDLSAGMNAVLVRLRQLPLALNASATRLSGAGRHLRDSHDEHQQSLVRQASALHEAQMT CCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHH SEEIRRTSLMAVERAEEVLQVARRSEALGQQGESAVERSLNGLADIRRVVDGIQERLTRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQSTTQIGEITETVKDLADQSHLLAVNAAIEAARSGEQGRGFAVVAREIRGLSDQSIQAT HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHH RRIRGILQDISTGIRDAAKMGEAGVQTIGTGLDQMRASGDSLRELSRIAQENSTAARQIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHH AAVTQQDAGFTQIFDAIADLSQLMDATLKRLESTQEATDTLRVVSDDVARMARQFNATG HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]