| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759977
Identifier: 108759977
GI number: 108759977
Start: 3922235
End: 3923734
Strand: Direct
Name: 108759977
Synonym: MXAN_3375
Alternate gene names: NA
Gene position: 3922235-3923734 (Clockwise)
Preceding gene: 108760033
Following gene: 108760625
Centisome position: 42.91
GC content: 70.73
Gene sequence:
>1500_bases ATGAAGCTGTTTCGCATCGATTCCTTTCAGGTTGGGGCGGGGAAGACGCAGATGACCTGGTTCCGTTCGCTCCTCGTCGG CTCGCTGGCCTTTACGGCGGCGTGCGCCTCGGGGCCTCAGAAGAAGCAGACCGCTGCGCCGGAGGTGACGCCGCCCGCGG CGCAACAGCCCGCGCCCGAGCAGAAGCCGGTGCCGCCTCCCGCGCAGAAGTCCGGCAGCGCGCAGTCCGCCTTCGCGGCG GCGCTCCAGTCCTATGAAGCGGGGGACCTGGACGGTGCGCGCAAGGGCTTCGAGGCGGTGGTGGATGAACTGCCGCAGAG CCTCAACGCGCAGTTCAACCTGGGCGTCATCGCGGAGCGCCAGGGCCGTCCGGATGACGCGCGCGTGGCCTACGAGAAGG TCCTCCTGTTGGACCCGGCGCACGTGCCCGCGGTGGTCAACCTGGGCGTCATGTATCGGGCGCAGGGGCGGCTGGACGAA GCCATCGCGTTGTTCCAGCGGGCGCTGAAGACGCCTGGTCGCGAGTACGACGCGTCGCTGCTCAACAGCCTGTCCATCAC CTATCGCGTTGCCGGAAAGCTGGACGAGTCCGAGGCCGCCGCGCGCCGCGTGCTGGTGCGCAACAAGGACGACCCGGGGG CCTACAAGAACCTGGCGCACGTGGCCTACGCACGGGAGAAGTACCGGCTGGCGGAGCTGCTGGCCGGCACCGCGCGCAAG CACTCGGAGAACGACCCGGCGCTCTACAACCTGCTGGGCATGGTCTACCTGAAGCTGGACGACCGGGCGCGCGCGCTGGT GCAGTTCCAGAAGGCCATCTCCCTGGATGCGAAATTCACCCCGGGCTACCTCAACCTGGGCGCCCTGGCGCTGAGCTACC GCGACTACGTGGGCGCCGAGCGCTCCTTCGGAAAGGCCGTGGAGCTGGAGCCGGGCTCACCGGACGCGACGCTGTACCTG GCCTGGGCGCTGGACGGGCAGAAGGGGCGTGACCCGAAGAAGGGCCTGGCCGCGGGCGAGGCGTTCGAGAAGGTGCTGGC CACGCGCGCGGACCTGCCGGAGGCCGTGTGCGGCGCGGGCTGGGCGTATGCGTCGGACCGCGCGGGCTGGCAGAAGGCCA TCGCGTTCCTCGACCGCTGCAAGGGCCTGGAGACGACGACCGACAATGACAAGCAGATGATCACCGCGAAGGTCCAGGGC CTGCAGAACATGCTCAAGGCCCCACCACCCGAGGCCGCGCCCGCCACCGCGGAAGGGGAAGGCGATGGCGCTCCGGCGGA TGAGGCCATTGGCGGCGGTGGTGCGCAGCCCGCGGGGGGCGCCGAGGGCGTGGCGCCTGGACAGGGCTCGGATGTGGCGC CGGAAGGCGATGCCACGGGCGGCGCGGGCGCACATCCTGGGCAGGGCACTGATGCGATGCCCGCGGACGACGCGACCGGT GGCGTGGGCAGTGGGGCGCCGCTTGCTCCCGGTGGGAAAGGCACGCCCGCGGGCAAGTGA
Upstream 100 bases:
>100_bases TGGAAGGCGCCACCGCGACGACGCCGGCCCCGGCGGACTCCTCGAAGCCCTCGGATGACGAGGCGCAGGCACCCACGGCG GCGCGCGGGGAGGTGCTGCG
Downstream 100 bases:
>100_bases GGCGGCTTCGCTTGGGGAGCGCCGTGCGTCGTTTCCATCGGGGCCACCTGGCACCCGAGGCATCACCTCAGCAGGCAGGC TGGAGTTTTGACGAAGAGGG
Product: putative adventurous gliding protein T
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Adventurous Gliding Protein T; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Family Protein; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Adventurous Gliding Motility Protein AglT; Tetratricopeptide Repeat Protein; Peptidase; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MKLFRIDSFQVGAGKTQMTWFRSLLVGSLAFTAACASGPQKKQTAAPEVTPPAAQQPAPEQKPVPPPAQKSGSAQSAFAA ALQSYEAGDLDGARKGFEAVVDELPQSLNAQFNLGVIAERQGRPDDARVAYEKVLLLDPAHVPAVVNLGVMYRAQGRLDE AIALFQRALKTPGREYDASLLNSLSITYRVAGKLDESEAAARRVLVRNKDDPGAYKNLAHVAYAREKYRLAELLAGTARK HSENDPALYNLLGMVYLKLDDRARALVQFQKAISLDAKFTPGYLNLGALALSYRDYVGAERSFGKAVELEPGSPDATLYL AWALDGQKGRDPKKGLAAGEAFEKVLATRADLPEAVCGAGWAYASDRAGWQKAIAFLDRCKGLETTTDNDKQMITAKVQG LQNMLKAPPPEAAPATAEGEGDGAPADEAIGGGGAQPAGGAEGVAPGQGSDVAPEGDATGGAGAHPGQGTDAMPADDATG GVGSGAPLAPGGKGTPAGK
Sequences:
>Translated_499_residues MKLFRIDSFQVGAGKTQMTWFRSLLVGSLAFTAACASGPQKKQTAAPEVTPPAAQQPAPEQKPVPPPAQKSGSAQSAFAA ALQSYEAGDLDGARKGFEAVVDELPQSLNAQFNLGVIAERQGRPDDARVAYEKVLLLDPAHVPAVVNLGVMYRAQGRLDE AIALFQRALKTPGREYDASLLNSLSITYRVAGKLDESEAAARRVLVRNKDDPGAYKNLAHVAYAREKYRLAELLAGTARK HSENDPALYNLLGMVYLKLDDRARALVQFQKAISLDAKFTPGYLNLGALALSYRDYVGAERSFGKAVELEPGSPDATLYL AWALDGQKGRDPKKGLAAGEAFEKVLATRADLPEAVCGAGWAYASDRAGWQKAIAFLDRCKGLETTTDNDKQMITAKVQG LQNMLKAPPPEAAPATAEGEGDGAPADEAIGGGGAQPAGGAEGVAPGQGSDVAPEGDATGGAGAHPGQGTDAMPADDATG GVGSGAPLAPGGKGTPAGK >Mature_499_residues MKLFRIDSFQVGAGKTQMTWFRSLLVGSLAFTAACASGPQKKQTAAPEVTPPAAQQPAPEQKPVPPPAQKSGSAQSAFAA ALQSYEAGDLDGARKGFEAVVDELPQSLNAQFNLGVIAERQGRPDDARVAYEKVLLLDPAHVPAVVNLGVMYRAQGRLDE AIALFQRALKTPGREYDASLLNSLSITYRVAGKLDESEAAARRVLVRNKDDPGAYKNLAHVAYAREKYRLAELLAGTARK HSENDPALYNLLGMVYLKLDDRARALVQFQKAISLDAKFTPGYLNLGALALSYRDYVGAERSFGKAVELEPGSPDATLYL AWALDGQKGRDPKKGLAAGEAFEKVLATRADLPEAVCGAGWAYASDRAGWQKAIAFLDRCKGLETTTDNDKQMITAKVQG LQNMLKAPPPEAAPATAEGEGDGAPADEAIGGGGAQPAGGAEGVAPGQGSDVAPEGDATGGAGAHPGQGTDAMPADDATG GVGSGAPLAPGGKGTPAGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI32307148, Length=274, Percent_Identity=27.007299270073, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI32307150, Length=274, Percent_Identity=27.007299270073, Blast_Score=71, Evalue=3e-12, Organism=Drosophila melanogaster, GI17647755, Length=281, Percent_Identity=26.6903914590747, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24585827, Length=281, Percent_Identity=26.6903914590747, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24585829, Length=281, Percent_Identity=26.6903914590747, Blast_Score=72, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51920; Mature: 51920
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFRIDSFQVGAGKTQMTWFRSLLVGSLAFTAACASGPQKKQTAAPEVTPPAAQQPAPE CCEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCC QKPVPPPAQKSGSAQSAFAAALQSYEAGDLDGARKGFEAVVDELPQSLNAQFNLGVIAER CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC QGRPDDARVAYEKVLLLDPAHVPAVVNLGVMYRAQGRLDEAIALFQRALKTPGREYDASL CCCCCHHHHHHHHHEEECCCCCCHHHHCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHH LNSLSITYRVAGKLDESEAAARRVLVRNKDDPGAYKNLAHVAYAREKYRLAELLAGTARK HHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSENDPALYNLLGMVYLKLDDRARALVQFQKAISLDAKFTPGYLNLGALALSYRDYVGAE CCCCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC RSFGKAVELEPGSPDATLYLAWALDGQKGRDPKKGLAAGEAFEKVLATRADLPEAVCGAG CCCCCEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCC WAYASDRAGWQKAIAFLDRCKGLETTTDNDKQMITAKVQGLQNMLKAPPPEAAPATAEGE CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GDGAPADEAIGGGGAQPAGGAEGVAPGQGSDVAPEGDATGGAGAHPGQGTDAMPADDATG CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GVGSGAPLAPGGKGTPAGK CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLFRIDSFQVGAGKTQMTWFRSLLVGSLAFTAACASGPQKKQTAAPEVTPPAAQQPAPE CCEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCC QKPVPPPAQKSGSAQSAFAAALQSYEAGDLDGARKGFEAVVDELPQSLNAQFNLGVIAER CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC QGRPDDARVAYEKVLLLDPAHVPAVVNLGVMYRAQGRLDEAIALFQRALKTPGREYDASL CCCCCHHHHHHHHHEEECCCCCCHHHHCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHH LNSLSITYRVAGKLDESEAAARRVLVRNKDDPGAYKNLAHVAYAREKYRLAELLAGTARK HHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSENDPALYNLLGMVYLKLDDRARALVQFQKAISLDAKFTPGYLNLGALALSYRDYVGAE CCCCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC RSFGKAVELEPGSPDATLYLAWALDGQKGRDPKKGLAAGEAFEKVLATRADLPEAVCGAG CCCCCEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCC WAYASDRAGWQKAIAFLDRCKGLETTTDNDKQMITAKVQGLQNMLKAPPPEAAPATAEGE CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GDGAPADEAIGGGGAQPAGGAEGVAPGQGSDVAPEGDATGGAGAHPGQGTDAMPADDATG CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GVGSGAPLAPGGKGTPAGK CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA