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The map label for this gene is ybfF [H]

Identifier: 108759962

GI number: 108759962

Start: 942022

End: 942795

Strand: Reverse

Name: ybfF [H]

Synonym: MXAN_0824

Alternate gene names: 108759962

Gene position: 942795-942022 (Counterclockwise)

Preceding gene: 108760469

Following gene: 108762769

Centisome position: 10.32

GC content: 70.67

Gene sequence:

>774_bases
ATGGTCCTCGAGAGTTTCCTGGTGGGTGAGGGCGATGTGCCCACGGTGATGCTGCACGGCTTCCTGGGCACGGGGCGCAA
TCTGCGCTCACTGGCGGCGGCGTGGAGCGCGGCGGACCCGAGCCGGCGCATCCTCTTGCCAGACCTCACCGGACACGGGA
CGTCCCCTGCGCTGCCAGCGAACTCGGACCTCTACAGCATGGCCCGGGACGTGGTGGACACGGCGCGTGCGCAGGGCTTC
CAGGGTCCGTTCGACTGGGTGGGGCATTCGCTTGGAGGACGGGTGACGCTCGCGGCAAGCCTCAATGTCCCGGAGGCCGT
CCGGAGCGTGTCGCTGCTGGACATCGCACCGGGGCCTGTCCCGGGAGACTTGTCGGAGAGTGGCAAGGTGCTGGGCATCC
TTCTCCAGGCACCGGCTCAGGCGGAGAACCGCCGGGCGATGCGCGCGGAGCTCACGGGCCGCGGCTTGTCGGAGCCGCTG
GCGGACTGGCTGCTGATGAACCTGGTGACGGAGGAGAGCGGCGTGCGCTGGCGCTTCGACCGGCAGGGACTGGCGGGCCT
GCACTCGCGCGTGAATGACACAGACCTGTGGACAGCGGTGGAGCGCAAGGACCGGCCGCCGATGCGGTGCCTTCGGGGTG
GCCGCTCGAAGTACGTGAGTGACGCGGACGTGGAGCGCCTGGTGGCCGCGGGCTGCCCGGTGGAGACGCTGCCGGAGGCC
GGGCACTTCGTCCACGTGGACGCGCCGCAAGCGGTGTTGGCGTGGCTGCGCTGA

Upstream 100 bases:

>100_bases
GGCACGCGGAAGACCTCGTCAGGCAGGGCGTTCAAGGTATGAAGCGGCACGGCCCGCCCCGCGTCAAGGCGAACGGGGTG
GAGAGAAAGGCACGAATCGC

Downstream 100 bases:

>100_bases
GCTACTGCTGAACCTGGAGGATGCGCCTCAGATGCGCACGCCCAGCAGCAGGCCGGGCCACATCCGGACGCCGCCGGGGC
CGCGGCCCAGCTTCCACTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MVLESFLVGEGDVPTVMLHGFLGTGRNLRSLAAAWSAADPSRRILLPDLTGHGTSPALPANSDLYSMARDVVDTARAQGF
QGPFDWVGHSLGGRVTLAASLNVPEAVRSVSLLDIAPGPVPGDLSESGKVLGILLQAPAQAENRRAMRAELTGRGLSEPL
ADWLLMNLVTEESGVRWRFDRQGLAGLHSRVNDTDLWTAVERKDRPPMRCLRGGRSKYVSDADVERLVAAGCPVETLPEA
GHFVHVDAPQAVLAWLR

Sequences:

>Translated_257_residues
MVLESFLVGEGDVPTVMLHGFLGTGRNLRSLAAAWSAADPSRRILLPDLTGHGTSPALPANSDLYSMARDVVDTARAQGF
QGPFDWVGHSLGGRVTLAASLNVPEAVRSVSLLDIAPGPVPGDLSESGKVLGILLQAPAQAENRRAMRAELTGRGLSEPL
ADWLLMNLVTEESGVRWRFDRQGLAGLHSRVNDTDLWTAVERKDRPPMRCLRGGRSKYVSDADVERLVAAGCPVETLPEA
GHFVHVDAPQAVLAWLR
>Mature_257_residues
MVLESFLVGEGDVPTVMLHGFLGTGRNLRSLAAAWSAADPSRRILLPDLTGHGTSPALPANSDLYSMARDVVDTARAQGF
QGPFDWVGHSLGGRVTLAASLNVPEAVRSVSLLDIAPGPVPGDLSESGKVLGILLQAPAQAENRRAMRAELTGRGLSEPL
ADWLLMNLVTEESGVRWRFDRQGLAGLHSRVNDTDLWTAVERKDRPPMRCLRGGRSKYVSDADVERLVAAGCPVETLPEA
GHFVHVDAPQAVLAWLR

Specific function: Displays esterase activity toward palmitoyl-CoA, malonyl-CoA and pNP-butyrate [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI23200012, Length=261, Percent_Identity=29.5019157088123, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI23200008, Length=261, Percent_Identity=29.5019157088123, Blast_Score=79, Evalue=3e-15,
Organism=Escherichia coli, GI1786902, Length=251, Percent_Identity=27.0916334661355, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 27611; Mature: 27611

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLESFLVGEGDVPTVMLHGFLGTGRNLRSLAAAWSAADPSRRILLPDLTGHGTSPALPA
CCCCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC
NSDLYSMARDVVDTARAQGFQGPFDWVGHSLGGRVTLAASLNVPEAVRSVSLLDIAPGPV
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHEEHEECCCCCC
PGDLSESGKVLGILLQAPAQAENRRAMRAELTGRGLSEPLADWLLMNLVTEESGVRWRFD
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEC
RQGLAGLHSRVNDTDLWTAVERKDRPPMRCLRGGRSKYVSDADVERLVAAGCPVETLPEA
CCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCCCC
GHFVHVDAPQAVLAWLR
CCEEEECCHHHHHHHCC
>Mature Secondary Structure
MVLESFLVGEGDVPTVMLHGFLGTGRNLRSLAAAWSAADPSRRILLPDLTGHGTSPALPA
CCCCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC
NSDLYSMARDVVDTARAQGFQGPFDWVGHSLGGRVTLAASLNVPEAVRSVSLLDIAPGPV
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHEEHEECCCCCC
PGDLSESGKVLGILLQAPAQAENRRAMRAELTGRGLSEPLADWLLMNLVTEESGVRWRFD
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEC
RQGLAGLHSRVNDTDLWTAVERKDRPPMRCLRGGRSKYVSDADVERLVAAGCPVETLPEA
CCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCCCC
GHFVHVDAPQAVLAWLR
CCEEEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10493123 [H]